Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42999
Fish out of water: Insights from a case study of a highly social animal that failed the mirror self-recognition test Fish out of water: Insights from a case study of a highly social animal that failed the mirror self-recognition test
Mirror self-recognition (MSR) tests have been conducted with a variety of species with the aim of examining whether subject animals have the capacity for self-awareness. To date, the majority of animals that have convincingly passed are highly social mammals whose wild counterparts live in complex societies, though there is much debate concerning what constitutes passing and what passing...
Authors
Shannon Barber-Meyer, Lori J. Schmidt
Editorial: Plant-soil interactions under changing climate Editorial: Plant-soil interactions under changing climate
The health and well-being of plants and soil is crucial for all life on Earth. It is well-known that vegetation cover follows climatic zones, and plants respond to climatic drivers such as temperature and precipitation (Seddon et al., 2016; Kattge et al., 2020). It is also well-known that plant health depends on the properties and health of the soil (Ephrath et al., 2020), and that...
Authors
Sanna Sevanto, Charlotte Grossiord, Tamir Klein, Sasha C. Reed
Evidence for continental-scale dispersal of antimicrobial resistant bacteria by landfill-foraging gulls Evidence for continental-scale dispersal of antimicrobial resistant bacteria by landfill-foraging gulls
Anthropogenic inputs into the environment may serve as sources of antimicrobial resistant bacteria and alter the ecology and population dynamics of synanthropic wild animals by providing supplemental forage. In this study, we used a combination of phenotypic and genomic approaches to characterize antimicrobial resistant indicator bacteria, animal telemetry to describe host movement...
Authors
Christina Ahlstrom, Marielle L. van Toor, Hanna Woksepp, Jeffrey C Chandler, John Reed, Andrew B. Reeves, Jonas Waldenström, Alan B. Franklin, David C. Douglas, Jonas Bonnedahl, Andrew M. Ramey
Effective population size remains a suitable, pragmatic indicator of genetic diversity for all species, including forest trees Effective population size remains a suitable, pragmatic indicator of genetic diversity for all species, including forest trees
Fady & Bozzano highlight some challenges to a proposed Convention on Biological Diversity (CBD) indicator of genetic diversity based on effective population size, Ne (Fady and Bozzano, 2020; Hoban et al., 2020). We appreciate the thoughtful debate and concur that genetic diversity indicators must be reliable and scalable. We fully agree that “genetic diversity should be better considered...
Authors
Sean M. Hoban, Ivan Paz-Vinas, Sally Aitken, Laura D. Bertola, Martin F Breed, Michael W. Bruford, W. Chris Funk, Catherine E. Grueber, Myriam Heuertz, Paul A. Hohenlohe, Margaret Hunter, Rodolfo Jaffé, Margarida Lopes Fernandes, Joachim Mergeay, Farideh Moharrek, David O’Brien, Gernot Segelbacher, Cristiano Vernesi, Lisette Waits, Linda Laikre
Book review of "Plant anatomy—A concept based approach to the structure of seed plants" Book review of "Plant anatomy—A concept based approach to the structure of seed plants"
Plant Anatomy: A Concept-Based Approach to the Structure of Seed Plants by Crang, Lyons-Sobaski, and Wise is a beautifully-illustrated, 600+ page textbook highlighting the wonderful diversity of anatomical form in plants. The layout of the chapters follows many traditional plant anatomy textbooks. Plant Anatomy begins with an overview of plant morphology and proceeds through evolutionary...
Authors
Daniel E. Winkler
Diet and bathymetric distribution of juvenile Lake Trout Salvelinus namaycush in Lake Huron Diet and bathymetric distribution of juvenile Lake Trout Salvelinus namaycush in Lake Huron
Rehabilitation efforts for Lake Trout Salvelinus namaycush in Lake Huron have resulted in increased capture of young wild Lake Trout in annual bottom trawl surveys conducted by the U.S. Geological Survey. To better understand the ecology of juvenile (
Authors
Edward F. Roseman, Stephen Riley, Taaja Tucker, Steven A. Farha, Scott Jackson, Dustin Bowser
Upper Colorado River Basin 20th century droughts under 21st century warming: Plausible scenarios for the future Upper Colorado River Basin 20th century droughts under 21st century warming: Plausible scenarios for the future
This study builds on a collaboration with a water resource management community of practice in the Upper Colorado River Basin to develop scenarios of future drought and assess impacts on water supply reliability. Water managers are concerned with the impacts of warming on water year streamflow, but uncertainties in projections of climate make the application of these projections to...
Authors
Connie A. Woodhouse, Rebecca M. Smith, Stephanie A. McAfee, Gregory T. Pederson, Gregory J. McCabe, W. Paul Miller, Adam Csank
Assessing contributions of cold-water refuges to reproductive migration corridor conditions for adult salmon and steelhead trout in the Columbia River, USA Assessing contributions of cold-water refuges to reproductive migration corridor conditions for adult salmon and steelhead trout in the Columbia River, USA
Diadromous fish populations face multiple challenges along their migratory routes. These challenges include suboptimal water quality, harvest, and barriers to longitudinal and lateral connectivity. Interactions among factors influencing migration success make it challenging to assess management options for improving migratory fish conditions along riverine migration corridors. We...
Authors
Marcia N. Snyder, Nathan H. Schumaker, Jason B. Dunham, Matthew Keefer, P.T. Leinenbach, Allen Brookes, John Palmer, Jennifer Wu, Druscilla M Keenan, Joseph L. Ebersole
Water storage decisions will determine the distribution and persistence of imperiled river fishes Water storage decisions will determine the distribution and persistence of imperiled river fishes
Managing the world’s freshwater supply to meet societal and environmental needs in a changing climate is one of the biggest challenges for the 21st century. Dams provide water security, however, the allocation of dwindling water supply among reservoirs could exacerbate or ameliorate the effects of climate change on aquatic communities. Here, we show that the relative sensitivity of river...
Authors
Kimberly L. Dibble, Charles B. Yackulic, Theodore Kennedy, Kevin R. Bestgen, John C. Schmidt
Stony coral tissue loss disease in Florida is associated with disruption of host–zooxanthellae physiology Stony coral tissue loss disease in Florida is associated with disruption of host–zooxanthellae physiology
Samples from eight species of corals (Colpophyllia natans, Dendrogyra cylindrus, Diploria labyrinthiformis, Meandrina meandrites, Montastraea cavernosa, Orbicella faveolata, Pseudodiploria strigosa, and Siderastrea siderea) that exhibited gross clinical signs of acute, subacute, or chronic tissue loss attributed to stony coral tissue loss disease (SCTLD) were collected from the Florida...
Authors
Jan Landsberg, Yasu Kiryu, Esther Peters, Patrick Wilson, Yvonne Waters, Kerry Maxwell, Lindsay Huebner, Thierry M. Work
Evidence of post-breeding prospecting in a long-distance migrant. Evidence of post-breeding prospecting in a long-distance migrant.
Organisms assess biotic and abiotic cues at multiple sites when deciding where to settle. However, due to temporal constraints on this prospecting, the suitability of available habitat may be difficult for an individual to assess when cues are most reliable, or at the time they are making settlement decisions. For migratory birds, the postbreeding season may be the optimal time to...
Authors
Max Ciaglo, Ross Calhoun, Scott W Yanco, Michael B. Wunder, Craig A. Stricker, Brian D Linkhart
Self-limitation of sand storage in a bedrock-canyon river arising from the interaction of flow and grain size Self-limitation of sand storage in a bedrock-canyon river arising from the interaction of flow and grain size
Bedrock-canyon rivers tend to be supply limited because they are efficient transporters of sediment and not because the upstream supply of sediment is small. A byproduct of this supply limitation is that the finer alluvium stored in these rivers has shorter residence times and smaller volumes than in alluvial rivers. To improve our understanding of disequilibrium sediment transport and...
Authors
David J. Topping, Paul E. Grams, Ronald E. Griffiths, David J. Dean, Scott Wright, Joel A. Unema