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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42874

Novel landscape elements within natural gas fields increase densities but not fitness of an important songbird nest predator Novel landscape elements within natural gas fields increase densities but not fitness of an important songbird nest predator

Identifying the elements within human-altered landscapes most associated with population and community changes is critical for conservation and management of sensitive species. We investigated which features of habitat change from natural gas development best explained the density of deer mice (Peromyscus maniculatus), an important nest predator of declining sagebrush-obligate songbirds...
Authors
Lindsey E. Sanders, Anna D. Chalfoun

Forecasting for dry and wet avalanches during mixed rain and snow storm events Forecasting for dry and wet avalanches during mixed rain and snow storm events

Natural wet slab avalanches release when rain or melt water decreases snowpack strength, and natural dry slab avalanches release when an increased load overcomes snowpack strength. This study investigates avalanche activity resulting from mixed rain and snow falling on a faceted snowpack. This scenario produced an extensive slab avalanche cycle in March 2018 in the mountains near Ketchum...
Authors
Scott Savage, Erich Peitzsch, Simon Trautman, Benjamin VandenBos

Detecting snow depth change in avalanche path starting zones using uninhabited aerial systems and structure from motion photogrammetry Detecting snow depth change in avalanche path starting zones using uninhabited aerial systems and structure from motion photogrammetry

Understanding snow depth distribution and change is useful for avalanche forecasting and mitigation, runoff forecasting, and infrastructure planning. Advances in remote sensing are improving the ability to collect snow depth measurements. The development of structure from motion (SfM), a photogrammetry technique, combined with the use of uninhabited aerial systems (UASs) allows for high...
Authors
Erich H. Peitzsch, Daniel B. Fagre, Jordy Hendrikx, Karl W. Birkeland

Integrative taxonomy resolves taxonomic uncertainty for freshwater mussels being considered for protection under the U.S. Endangered Species Act Integrative taxonomy resolves taxonomic uncertainty for freshwater mussels being considered for protection under the U.S. Endangered Species Act

Objectively delimiting species boundaries remains an important challenge in systematics and becomes urgent when unresolved taxonomy complicates conservation and recovery efforts. We examined species boundaries in the imperiled freshwater mussel genus Cyclonaias(Bivalvia: Unionidae) using morphometrics, molecular phylogenetics, and multispecies coalescent models to help guide pending...
Authors
Nathan A. Johnson, Chase H. Smith, John M. Pfeiffer, Chalres R. Randklev, James D. Williams, James D. Austin

Emigration and transportation stress of juvenile Chinook salmon relative to their reintroduction upriver of Shasta Dam, California, 2017–18 Emigration and transportation stress of juvenile Chinook salmon relative to their reintroduction upriver of Shasta Dam, California, 2017–18

The Bureau of Reclamation supports the Shasta Dam Fish Passage Evaluation (SDFPE; Yip, 2015) program, and in 2016 set out to determine the feasibility of reintroducing winter-run and spring-run Chinook salmon (Oncorhynchus tshawytscha) and steelhead (O. mykiss) to tributaries upstream of Shasta Dam. Ideally, reintroduction strategy includes trapping naturally produced downstream...
Authors
Noah S. Adams, Theresa L. Liedtke, John M. Plumb, Lisa K. Weiland, Amy C. Hansen, Scott D. Evans

Distribution, habitat, and population size of Island Night Lizards on San Nicolas Island, California Distribution, habitat, and population size of Island Night Lizards on San Nicolas Island, California

The Island Night Lizard (Xantusia riversiana) was removed from the federal list of threatened species in May 2014. This strongly differentiated species is endemic to 3 of the southern California Channel Islands—San Clemente, San Nicolas, and Santa Barbara. Suitable habitat for Island Night Lizards is extensive on San Clemente Island, and the species is abundant there. Habitat is limited...
Authors
Charles A. Drost, Gary M. Fellers, Thomas R. Murphey, Patrick M. Kleeman, Brian J. Halstead, Ryan P. O'Donnell

Comparison of estimators for monitoring long-term population trends in deer mice, Peromyscus maniculatus, on the California Channel Islands Comparison of estimators for monitoring long-term population trends in deer mice, Peromyscus maniculatus, on the California Channel Islands

Capture-recapture methods are commonly used to estimate abundance and density of wild animal populations. Although a variety of sophisticated analytical techniques are available to evaluate capture-recapture data, vertebrate monitoring programs often lack the resources (e.g., time, personnel, and/or analytical expertise) to apply these methods. As an alternative, simple population...
Authors
Catherin A. Schwemm, Charles A. Drost, John L. Orrock, Timothy J. Coonan, Thomas R. Stanley

Sediment infilling benefits rainbow trout passage in a baffled channel Sediment infilling benefits rainbow trout passage in a baffled channel

Fish are thought to exploit low velocity recirculation zones in the wakes of baffles to take refuge from challenging hydraulic conditions in baffled culverts. Here, we investigate how sediment deposition in the wakes of baffles affects passage and behaviors of juvenile rainbow trout in a baffled experimental flume. High temporal resolution 3D fish tracking provided detailed kinematics of...
Authors
Jason Duguay, Brendan Foster, R.W. Jay Lacey, Theodore R. Castro-Santos

Endangered species recovery: A resource allocation problem Endangered species recovery: A resource allocation problem

Many nations have laws to identify and protect imperiled species and their ecosystems. In the United States, actions taken under the Endangered Species Act (ESA) have prevented many extinctions, but few listed species have recovered to the point where they can have the ESA protections removed (1, 2). One reason for this [among many (3)] is a shortfall in funding, raising a conundrum for...
Authors
Leah R. Gerber, Michael C. Runge, Richard F. Maloney, Gwenllian D. Iacona, C. Ashton Drew, Stephanie Avery-Gomm, James Brazill-Boast, Deborah T. Crouse, Rebecca S. Epanchin-Niell, Sarah B. Hall, Lynn A. Maguire, Tim Male, Don Morgan, Jeff Newman, Hugh P. Possingham, Libby Rumpff, Katherine C. B. Weiss, Robyn S. Wilson, Marilet A. Zablan

Changing station coverage impacts temperature trends in the Upper Colorado River Basin Changing station coverage impacts temperature trends in the Upper Colorado River Basin

Over the Upper Colorado River Basin (UCRB), temperatures in widely used gridded data products do not warm as much as mean temperatures from a stable set of U.S. Historical Climatology Network (USHCN) stations, located at generally lower elevations, in most months of the year. This is contrary to expectations of elevation-dependent warming, which suggests that warming increases with...
Authors
Stephanie A. McAfee, Gregory J. McCabe, Stephen T. Gray, Gregory T. Pederson

Drought and fire in the western USA: Is climate attribution enough? Drought and fire in the western USA: Is climate attribution enough?

Purpose of Review I sought to review the contributions of recent literature and prior foundational papers to our understanding of drought and fire. In this review, I summarize recent literature on drought and fire in the western USA and discuss research directions that may increase the utility of that body of work for twenty-first century application. I then describe gaps in the...
Authors
Jeremy S. Littell

Population differences in susceptibility to Plasmodium relictum in zebra finches Taeniopygia guttata Population differences in susceptibility to Plasmodium relictum in zebra finches Taeniopygia guttata

Domesticated Australian and Timor zebra finches (Taeniopygia guttata castanotis, and T. guttata guttata, respectively) were inoculated with canary (Serinus canaria) blood containing a Hawaiian isolate of Plasmodium relictum (lineage GRW04), a hemoparasite that causes avian malaria. In two experimental trials, Timor, but not Australian zebra finches developed parasitemia that was detected...
Authors
Erik K. Hofmeister, Christopher N. Balakrishnan, Carter T. Atkinson
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