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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42897

Plant and microbial biomarkers suggest mechanisms of soil organic carbon accumulation in a Mojave Desert ecosystem under elevated CO2 Plant and microbial biomarkers suggest mechanisms of soil organic carbon accumulation in a Mojave Desert ecosystem under elevated CO2

We investigated how properties of soil organic matter (SOM) were altered after 10 years exposure to elevated atmospheric CO2 concentration ([CO2]) in a Mojave Desert ecosystem, using plant and microbial biomarkers. We focused on roles of Larrea tridentata, the dominant evergreen shrub which form islands of fertility, and biological soil crusts which have extensive cover in plant...
Authors
Akihiro Koyama, Benjamin Harlow, Cheryl R. Kuske, Jayne Belnap, R. Dave Evans

Spatial distribution of estuarine diamond-backed terrapins (Malaclemys terrapin) and risk analysis from commercial blue crab (Callinectes sapidus) trapping at the Savannah Coastal Refuges Complex, USA Spatial distribution of estuarine diamond-backed terrapins (Malaclemys terrapin) and risk analysis from commercial blue crab (Callinectes sapidus) trapping at the Savannah Coastal Refuges Complex, USA

The diamond-backed terrapin (Malaclemys terrapin) is a small estuarine turtle distributed along the Atlantic and Gulf Coasts of the USA. Terrapin populations are declining throughout their range and one of the main causes is mortality by drowning as bycatch in commercially-fished blue crab (Callinetes sapidus) traps (aka pots). We conducted head counts of terrapins and documented the...
Authors
Jeffrey E. Lovich, Meagan Thomas, Kirsten E. Ironside, Charles B. Yackulic, Shellie R. Puffer

Exxon Valdez oil spill long-term herring research and monitoring program final report Exxon Valdez oil spill long-term herring research and monitoring program final report

This study includes annual field surveys of Ichthyophonus, viral hemorrhagic septicemia virus, and erythrocytic necrosis virus in adult and juvenile Pacific herring (Clupea pallasii) in Prince William Sound, Alaska and several reference populations in Alaska, British Columbia, and Washington. Results from controlled experimental studies with Ichthyophonus indicated that: • Pacific...
Authors
Paul Hershberger

Atmospheric and surface climate associated with 1986–2013 wildfires in North America Atmospheric and surface climate associated with 1986–2013 wildfires in North America

We analyze climate simulations conducted with the RegCM3 regional climate model on 50‐ and 15‐km model grids to diagnose the dependence of wildfire incidence and area burned variations on monthly climate long‐term means and anomalies over North America for the period 1986–2013. We created a new wildfire database by merging the Fire Program Analysis Fire‐Occurrence Database, the National
Authors
Steven W. Hostetler, Patrick J. Bartlein, Jay R. Alder

On the relationship between conditional (CAR) and simultaneous (SAR) autoregressive models On the relationship between conditional (CAR) and simultaneous (SAR) autoregressive models

We clarify relationships between conditional (CAR) and simultaneous (SAR) autoregressive models. We review the literature on this topic and find that it is mostly incomplete. Our main result is that a SAR model can be written as a unique CAR model, and while a CAR model can be written as a SAR model, it is not unique. In fact, we show how any multivariate Gaussian distribution on a...
Authors
Jay M. Ver Hoef, Ephraim M. Hanksb, Mevin Hooten

Identifying and eliminating sources of recreational water quality degradation along an urban coast Identifying and eliminating sources of recreational water quality degradation along an urban coast

Restoration of highly degraded urban coastal waters often requires large-scale, complex projects, but in the interim, smaller-scale efforts can provide immediate improvements to water quality conditions for visitor use. We examined short-term efforts to improve recreational water quality near the Grand Calumet River (GC) in the Laurentian Great Lakes. Identified as an Area of Concern...
Authors
Meredith B. Nevers, Muruleedhara Byappanahalli, Dawn Shively, Paul M. Buszka, P. Ryan Jackson, Mantha S. Phanikumar

Research, monitoring, and evaluation of emerging issues and measures to recover the Snake River fall Chinook salmon ESU Research, monitoring, and evaluation of emerging issues and measures to recover the Snake River fall Chinook salmon ESU

The portion of the Snake River fall Chinook Salmon Oncorhynchus tshawytscha ESU that spawns upstream of Lower Granite Dam transitioned from low to high abundance during 1992–2017 in association with U.S. Endangered Species Act recovery efforts and other federally mandated actions. This annual report focuses on (1) numeric and habitat use responses by natural- and hatchery-origin spawners...
Authors
Kenneth Tiffan, John M. Plumb, Russell W. Perry, John Erhardt, Rulon J. Hemingway, Brad Bickford, Tobyn N. Rhodes, William P. Connor, Frank L. Mullins

Genetic structure in Elk persists after translocation Genetic structure in Elk persists after translocation

Elk (Cervus canadensis) translocation success is thought to be facilitated by high post‐release herd cohesion and limited movements; both should ensure genetic mixing following release. Such mixing is important to reduce potential effects of inbreeding or genetic drift, which can be especially important in small founding populations. We had a natural experiment where we could evaluate...
Authors
Lisa I Muller, Jennifer L. Murrow, Jason L. Lupardus, Joseph D. Clark, Joseph G. Yarkovich, William H. Stiver, E. Kim Delozier, Brittany L. Slabach, John L. Cox, Bradley F. Miller

Molecular and morphometric analyses reveal cryptic diversity within freshwater mussels (Bivalvia: Unionidae) of the western Gulf coastal drainages of the USA Molecular and morphometric analyses reveal cryptic diversity within freshwater mussels (Bivalvia: Unionidae) of the western Gulf coastal drainages of the USA

Past geological processes and climate change affected current species distributions and the genetic structure of riverine fauna. Western Gulf of Mexico coastal rivers harbour four mussel species within the genus Fusconaia(Bivalvia: Unionida). The distributions of these species are unclear owing to their indistinguishable shell morphologies. Using molecular phylogenetic and Fourier...
Authors
Anna M. Pieri, Kentaro Inoue, Nathan A. Johnson, Chase H. Smith, John L. Harris, Clint Robertson, Charles R. Randklev

Co‐occurrence dynamics of endangered Lower Keys marsh rabbits and free‐ranging domestic cats: Prey responses to an exotic predator removal program Co‐occurrence dynamics of endangered Lower Keys marsh rabbits and free‐ranging domestic cats: Prey responses to an exotic predator removal program

The Lower Keys marsh rabbit (Sylvilagus palustris hefneri) is one of many endangered endemic species of the Florida Keys. The main threats are habitat loss and fragmentation from sea‐level rise, development, and habitat succession. Exotic predators such as free‐ranging domestic cats (Felis catus) pose an additional threat to these endangered small mammals. Management strategies have...
Authors
Michael V. Cove, Beth Gardner, Theodore R. Simons, Allan F. O’Connell

Taiga bean goose: Harvest assessment for the Central Management Unit: 2018 Taiga bean goose: Harvest assessment for the Central Management Unit: 2018

In 2016 the European Goose Management International Working Group (EGM IWG) began development of an adaptive harvest management program for Taiga Bean Geese (TBG). In 2017, the EGM IWG adopted an interim harvest strategy consisting of a constant harvest rate (on adults) of 3% for the Central Management of Taiga Bean Geese. The interim strategy is intended to provide limited hunting...
Authors
Fred A. Johnson, Gitte Hoj Jensen, Mikko Alhainen, Anthony D. Fox, Jesper Madsen

Population dynamics of the northern tamarisk beetle (Diorhabda carinulata) in the Colorado River Basin Population dynamics of the northern tamarisk beetle (Diorhabda carinulata) in the Colorado River Basin

Throughout the Southwestern United States, riparian systems contain narrow belts of vegetation along streams and rivers. Although only a small percentage of the total land cover, this ecosystem is important for maintaining high species diversity and population densities of birds. Anthropogenic changes to Western riverine systems have enhanced their susceptibility to invasion by...
Authors
Levi R. Jamison, Charles van Riper
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