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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42702

Exogenous thyroid hormones regulate the activity of citrate synthase and cytochrome c oxidase in warm- but not cold-acclimated lake whitefish (Coregonus clupeaformis) Exogenous thyroid hormones regulate the activity of citrate synthase and cytochrome c oxidase in warm- but not cold-acclimated lake whitefish (Coregonus clupeaformis)

Thermal acclimation is known to elicit metabolic adjustments in ectotherms, but the cellular mechanisms and endocrine control of these shifts have not been fully elucidated. Here we examined the relationship between thermal acclimation, thyroid hormones and oxidative metabolism in juvenile lake whitefish. Impacts of thermal acclimation above (19 °C) or below (8 °C) the thermal optimum...
Authors
Megan A. Zak, Amy M. Regish, Stephen D. McCormick, Richard G. Manzon

Protozoal hepatitis in a western burrowing owl (Athene cunicularia hypugaea) Protozoal hepatitis in a western burrowing owl (Athene cunicularia hypugaea)

A western burrowing owl (Athene cunicularia hypugaea) found dead in southern California had many light-colored lesions visible grossly on its liver, and histopathology revealed extensive necrosis throughout the hepatic parenchyma. Single-celled organisms were seen in clear spaces within the areas of necrosis. The owl was diagnosed with protozoal hepatitis.
Authors
J. Christian Franson

An accurate method for measuring triploidy of larval fish spawns An accurate method for measuring triploidy of larval fish spawns

A standard flow cytometric protocol was developed for estimating triploid induction in batches of larval fish. Polyploid induction treatments are not guaranteed to be 100% efficient, thus the ability to quantify the proportion of triploid larvae generated by a particular treatment helps managers to stock high-percentage spawns and researchers to select treatments for efficient triploid...
Authors
Jill A. Jenkins, Rassa O. Draugelis-Dale, Robert Glennon, Anita M. Kelly, Bonnie L. Brown, John Morrison

Delineation of marsh types and marsh-type change in coastal Louisiana for 2007 and 2013 Delineation of marsh types and marsh-type change in coastal Louisiana for 2007 and 2013

The Bureau of Ocean Energy Management researchers often require detailed information regarding emergent marsh vegetation types (such as fresh, intermediate, brackish, and saline) for modeling habitat capacities and mitigation. In response, the U.S. Geological Survey in cooperation with the Bureau of Ocean Energy Management produced a detailed change classification of emergent marsh...
Authors
Stephen B. Hartley, Brady R. Couvillion, Nicholas M. Enwright

Relationships between gas field development and the presence and abundance of pygmy rabbits in southwestern Wyoming Relationships between gas field development and the presence and abundance of pygmy rabbits in southwestern Wyoming

More than 5957 km2 in southwestern Wyoming is currently covered by operational gas fields, and further development is projected through 2030. Gas fields fragment landscapes through conversion of native vegetation to roads, well pads, pipeline corridors, and other infrastructure elements. The sagebrush steppe landscape where most of this development is occurring harbors 24 sagebrush...
Authors
Stephen S. Germaine, Sarah K. Carter, Drew A. Ignizio, Aaron T. Freeman

Declines in low-elevation subalpine tree populations outpace growth in high-elevation populations with warming Declines in low-elevation subalpine tree populations outpace growth in high-elevation populations with warming

Species distribution shifts in response to climate change require that recruitment increase beyond current range boundaries. For trees with long life spans, the importance of climate-sensitive seedling establishment to the pace of range shifts has not been demonstrated quantitatively.Using spatially explicit, stochastic population models combined with data from long-term forest surveys...
Authors
Erin Conlisk, Cristina Castanha, Matthew J. Germino, Thomas T. Veblen, Jeremy M. Smith, Lara M. Kueppers

Deleterious effects of net clogging on the quantification of stream drift Deleterious effects of net clogging on the quantification of stream drift

Drift studies are central to stream and river ecological research. However, a fundamental aspect of quantifying drift — how net clogging affects the accuracy of results — has been widely ignored. Utilizing approaches from plankton and suspended sediment studies in oceanography and hydrology, we examined the rate and dynamics of net clogging across a range of conditions. We found that...
Authors
Jeffrey D. Muehlbauer, Theodore A. Kennedy, Adam J. Copp, Thomas A. Sabol

Evidence of sound production by spawning lake trout (Salvelinus namaycush) in lakes Huron and Champlain Evidence of sound production by spawning lake trout (Salvelinus namaycush) in lakes Huron and Champlain

Two sounds associated with spawning lake trout (Salvelinus namaycush) in lakes Huron and Champlain were characterized by comparing sound recordings to behavioral data collected using acoustic telemetry and video. These sounds were named growls and snaps, and were heard on lake trout spawning reefs, but not on a non-spawning reef, and were more common at night than during the day. Growls...
Authors
Nicholas S. Johnson, Dennis Higgs, Thomas R. Binder, J. Ellen Marsden, Tyler John Buchinger, Linnea Brege, Tyler Bruning, Steve A. Farha, Charles C. Krueger

Trends in Rainbow Trout recruitment, abundance, survival, and growth during a boom-and-bust cycle in a tailwater fishery Trends in Rainbow Trout recruitment, abundance, survival, and growth during a boom-and-bust cycle in a tailwater fishery

Data from a large-scale mark-recapture study was used in an open population model to determine the cause for long-term trends in growth and abundance of a Rainbow Trout Oncorhynchus mykiss population in the tailwater of Glen Canyon Dam, AZ. Reduced growth affected multiple life stages and processes causing negative feedbacks that regulated the abundance of the population, including...
Authors
Josh Korman, Micheal D. Yard, Theodore A. Kennedy

An evaluation of silver-stage American Eel conspecific chemical cueing during outmigration An evaluation of silver-stage American Eel conspecific chemical cueing during outmigration

American Eel Anguilla rostrata abundance has declined in recent decades, in part because sexually maturing, silver-stage adults, outmigrating from freshwater to oceanic spawning grounds, encounter migratory blockades or perish when passing through active hydroelectric turbines. To help improve downstream passage effectiveness and increase survival rates, the role of silver-stage American...
Authors
Andrew K. Schmucker, Nicholas S. Johnson, Heather S. Galbraith, Weiming Li

Acoustic deterrence of bighead carp (Hypophthalmichthys nobilis) to a broadband sound stimulus Acoustic deterrence of bighead carp (Hypophthalmichthys nobilis) to a broadband sound stimulus

Recent studies have shown the potential of acoustic deterrents against invasive silver carp (Hypophthalmichthys molitrix). This study examined the phonotaxic response of the bighead carp (H. nobilis) to pure tones (500–2000 Hz) and playbacks of broadband sound from an underwater recording of a 100 hp outboard motor (0.06–10 kHz) in an outdoor concrete pond (10 × 5 × 1.2 m) at the U.S...
Authors
Brooke J. Vetter, Kelsie Murchy, Aaron R. Cupp, Jon J. Amberg, Mark P. Gaikowski, Allen F. Mensinger

Frogs on the beach: Ecology of California Red-legged Frogs (Rana draytonii) in coastal dune drainages Frogs on the beach: Ecology of California Red-legged Frogs (Rana draytonii) in coastal dune drainages

California Red-legged Frogs (Rana draytonii) are typically regarded as inhabitants of permanent ponds, marshes, and slow-moving streams, but their ecology in other habitats, such as drainages among coastal dunes, remains obscure. Because coastal dune ecosystems have been degraded by development, off-highway vehicle use, stabilization, and invasive species, these unique ecosystems are the...
Authors
Brian J. Halstead, Patrick M. Kleeman
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