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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42707

Organic layers preserved in ice patches: A new record of Holocene environmental change on the Beartooth Plateau, USA Organic layers preserved in ice patches: A new record of Holocene environmental change on the Beartooth Plateau, USA

Growing season temperatures play a crucial role in controlling treeline elevation at regional to global scales. However, understanding of treeline dynamics in response to long-term changes in temperature is limited. In this study, we analyze pollen, plant macrofossils, and charcoal preserved in organic layers within a 10,400-year-old ice patch and in sediment from a 6000-year-old wetland...
Authors
Mio Alt, Kathryn Puseman, Craig Lee, Gregory T. Pederson, Joseph R. McConnell, Nathan J. Chellman, David B. McWethy

Glacial vicariance and secondary contact shape demographic histories in a freshwater mussel species complex Glacial vicariance and secondary contact shape demographic histories in a freshwater mussel species complex

Characterizing the mechanisms influencing the distribution of genetic variation in aquatic species can be difficult due to the dynamic nature of hydrological landscapes. In North America’s Central Highlands, a complex history of glacial dynamics, long-term isolation, and secondary contact have shaped genetic variation in aquatic species. Although the effects of glacial history have been
Authors
Nathan Johnson, Andrew R. Henderson, Jess W. Jones, Caitlin Beaver, Steve A. Ahlstedt, Gerald R. Dinkins, Nathan L. Eckert, Mark J. Endries, Jeffrey T. Garner, John L. Harris, Paul D. Hartfield, Don W. Hubbs, Timothy W. Lane, Monte A. McGregor, Kendall R. Moles, Cheryl Morrison, Matthew D. Wagner, James D. Williams, Chase H. Smith

Practical guide to measuring wetland carbon pools and fluxes Practical guide to measuring wetland carbon pools and fluxes

Wetlands cover a small portion of the world, but have disproportionate influence on global carbon (C) sequestration, carbon dioxide and methane emissions, and aquatic C fluxes. However, the underlying biogeochemical processes that affect wetland C pools and fluxes are complex and dynamic, making measurements of wetland C challenging. Over decades of research, many observational...
Authors
Sheel Bansal, Irena F. Creed, Brian Tangen, Scott D. Bridgham, Ankur R. Desai, Ken Krauss, Scott C Neubauer, Gregory E. Noe, Donald O. Rosenberry, Carl C. Trettin, Kimberly Wickland, Scott T. Allen, Ariane Arias-Ortiz, Anna R. Armitage, Dennis Baldocchi, Kakoli Banerjee, David Bastviken, Peter Berg, Matthew J. Bogard, Alex T. Chow, William H. Conner, Christopher Craft, Courtney Creamer, Tonya Delsontro, Jamie Duberstein, Meagan J. Eagle, M. Siobhan Fennessey, Sarah A. Finkelstein, Mathias Goeckede, Sabine Grunwald, Meghan Halibisky, Ellen R. Herbert, Mohammad Jahangir, Olivia Johnson, Miriam C. Jones, Jeffrey Kelleway, Sarah Knox, Kevin D. Kroeger, Kevin Kuehn, David Lobb, Amanda Loder, Shizhou Ma, Damien Maher, Gavin McNicol, Jacob Meier, Beth A. Middleton, Christopher T. Mills, Purbasha Mistry, Abhijith Mitra, Courtney Mobilian, Amanda M. Nahlik, Sue Newman, Jessica O’Connell, Patty Oikawa, Max Post van der Burg, Charles A Schutte, Chanchung Song, Camille L. Stagg, Jessica Turner, Rodrigo Vargas, Mark Waldrop, Markus Wallin, Zhaohui Aleck Wang, Eric Ward, Debra A. Willard, Stephanie A. Yarwood, Xiaoyan Zhu

Fire regime shapes butterfly communities through changes in nectar resources in an Australian tropical savanna Fire regime shapes butterfly communities through changes in nectar resources in an Australian tropical savanna

Fire-dependent savanna provides key habitat for butterflies globally, but we know little about how fire regimes, including fire frequency and season, affect them. These impacts are likely to be primarily indirect, through changes in overall habitat structure, the abundance of larval host plants, and/or the provision of nectar resources for adults. We examined the relationships among fire...
Authors
Julia B. Leone, Diane L. Larson, Anna E. Richards, Jon Schatz, Alan N. Andersen

Characterizing the movement of per- and polyfluoroalkyl substances in an avian aquatic–terrestrial food web Characterizing the movement of per- and polyfluoroalkyl substances in an avian aquatic–terrestrial food web

The movement of per- and polyfluoroalkyl substances (PFAS) through linked aquatic–terrestrial food webs is not well understood. Tree swallows (Tachycineta bicolor) in such systems may be exposed to PFAS from multiple abiotic and/or biotic compartments. We show from fatty acid signatures and carbon stable isotopes that tree swallow nestlings in southwestern Ontario fed on both terrestrial...
Authors
Kailee E. Hopkins, Melissa A. McKinney, Amandeep Saini, Robert J. Letcher, Natalie Karouna-Renier, Kim J. Fernie

Deer management generally reduces densities of nymphal Ixodes scapularis, but not prevalence of infection with Borrelia burgdorferi sensu stricto Deer management generally reduces densities of nymphal Ixodes scapularis, but not prevalence of infection with Borrelia burgdorferi sensu stricto

Human Lyme disease–primarily caused by the bacterium Borrelia burgdorferi sensu stricto (s.s.) in North America–is the most common vector-borne disease in the United States. Research on risk mitigation strategies during the last three decades has emphasized methods to reduce densities of the primary vector in eastern North America, the blacklegged tick (Ixodes scapularis). Controlling...
Authors
Alynn Martin, Danielle Buttke, Jordan Raphael, Kelsey Taylor, Sarah Maes, Christina M. Parise, Howard Ginsberg, Paul C. Cross

Landscape configuration alters movement behavior and space-use of a Hawaiian forest bird community Landscape configuration alters movement behavior and space-use of a Hawaiian forest bird community

Habitat loss and fragmentation are considered the greatest threats to ecosystems worldwide. Movement reveals how individuals meet their habitat requirements and respond to environmental heterogeneity, and thus can provide a powerful tool for investigating how animals respond to changes in landscape configuration. In our study, we examined the effects of landscape configuration on the...
Authors
Kristina L. Paxton, Jennifer R Smetzer, Patrick J. Hart, Marti J Anderson, Eben H. Paxton

Conserved grasslands support similar pollinator diversity as pollinator-specific practice regardless of proximal cropland and pesticide exposure Conserved grasslands support similar pollinator diversity as pollinator-specific practice regardless of proximal cropland and pesticide exposure

Pollinator diversity and abundance are declining globally. Cropland agriculture and the corresponding use of agricultural pesticides may contribute to these declines, while increased pollinator habitat (flowering plants) can help mitigate them. Here we tested whether the relative effect of wildflower plantings on pollinator diversity and counts were modified by proportion of nearby...
Authors
Johanna M. Kraus, Kelly Smalling, Mark W. Vandever, Carrie E. Givens, Cassandra Smith, Dana W. Kolpin, Michelle L. Hladik

Divergent community trajectories with climate change across a fine-scale gradient in snow depth Divergent community trajectories with climate change across a fine-scale gradient in snow depth

Fine-scale microclimate variation due to complex topography can shape both current vegetation distributional patterns and how vegetation responds to changing climate. Topographic heterogeneity in mountains is hypothesized to mediate responses to regional climate change at the scale of metres. For alpine vegetation especially, the interplay between changing temperatures and...
Authors
Meagan Ford Oldfather, Sarah C. Elmendorf, Elisa Van Cleemput, Jonathan J. Henn, Jared D. Huxley, Caitlin T. White, Hope C. Humphries, Marko J. Spasojevic, Katharine N. Suding, Nancy C. Emery

Incorporating environmental heterogeneity and observation effort to predict host distribution and viral spillover from a bat reservoir Incorporating environmental heterogeneity and observation effort to predict host distribution and viral spillover from a bat reservoir

Predicting the spatial occurrence of wildlife is a major challenge for ecology and management. In Latin America, limited knowledge of the number and locations of vampire bat roosts precludes informed allocation of measures intended to prevent rabies spillover to humans and livestock. We inferred the spatial distribution of vampire bat roosts while accounting for observation effort and
Authors
Rita Ribeiro, Jason Matthiopoulos, Finn Lindgre, Carlos Tello, Carlos M. Zariquiey, William Valderrama, Tonie E. Rocke, Daniel G. Streicker

Understanding marsh elevation and accretion processes and vulnerability to rising sea levels across climatic and geomorphic gradients in California, USA Understanding marsh elevation and accretion processes and vulnerability to rising sea levels across climatic and geomorphic gradients in California, USA

Tidal marshes build elevations by below- and aboveground organic and mineral soil processes. Marsh elevation and accretion data can be used to determine if marshes are keeping pace with sea-level rise. Using a network of 54 deep rod surface elevation tables with paired feldspar marker horizon plots, we tracked elevation and accretion trends across 16 marshes in California, USA. All sites...
Authors
Karen M. Thorne, McKenna Leigh Bristow, Lyndsay L. Rankin, Katya E. Kovalenko, Justine Annaliese Neville, Chase M. Freeman, Glenn R. Guntenspergen

Characterization of acoustic detection efficiency using an unmanned surface vessel as a mobile receiver platform Characterization of acoustic detection efficiency using an unmanned surface vessel as a mobile receiver platform

Studies involving acoustic telemetry typically use stationary acoustic receivers arranged in an array or grid. Unmanned surface vehicle (USV)-based mobile receivers offer advantages over the latter approach: the USV can be programmed to autonomously carry a receiver to and from target locations, more readily adapting to a survey’s spatial scope and scale. This work examines the acoustic...
Authors
Eric M. Gaskell, Tyler Reid Funnell, Christopher Holbrook, Darryl W. Hondorp, Xiaobo Tan
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