Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 43280
Bioaccumulation and transfer of per- and polyfluoroalkyl substances (PFAS) in a stream and riparian food web contaminated by food processing wastewater Bioaccumulation and transfer of per- and polyfluoroalkyl substances (PFAS) in a stream and riparian food web contaminated by food processing wastewater
We evaluated the bioaccumulation and transfer of per- and polyfluoroalkyl substances (PFAS) in a stream food web contaminated by a food processing facility. Abiotic (i.e., water, sediment, and foam) and biotic (i.e., algae, aquatic insect larvae and adults, fish, and riparian spiders) matrices were sampled upstream and downstream of the facility’s wastewater outfall. Compared with...
Authors
Christopher James Kotalik, Laura E. Hubbard, Brittany G. Perrotta, David M. Walters, Dana W. Kolpin, James L. Gray, Alison M. Zachritz, Johanna M. Kraus, Carrie E. Givens, Gary A. Lamberti, Karen A. Kidd
Bovine SNP array-based genetic assessment of American plains bison at American Prairie Bovine SNP array-based genetic assessment of American plains bison at American Prairie
American plains bison (Bison bison bison, bison hereafter) experienced an extreme demographic bottleneck in the late 1800s. The species has since rebounded but is primarily managed as small and isolated herds due to habitat and sociopolitical limitations. Thus, reintroducing bison and allowing herds to achieve as much of their natural dynamics as possible is a major conservation goal...
Authors
Shawna J Zimmerman, Rebecca M Gooley, Sara J. Oyler-McCance, Scott Heidebrink, Emily Herman, Paul Stothard, Hila Shamon, Cody W Edwards, Miranda Terwilliger, Budhan S Pukazhenthi, Klaus-Peter Koepfli
Variation in gene expression across infection status and elevation in a Hawaiian honeycreeper Variation in gene expression across infection status and elevation in a Hawaiian honeycreeper
Introduced pathogens exert novel selection on hosts, and although many host species have experienced drastic population declines in the absence of adaptation, some hosts have adapted to highly virulent pathogens. For instance, mosquitoes and Plasmodium relictum introduced to the Hawaiian Islands have resulted in extinctions and catastrophic population declines due to avian malaria...
Authors
Loren Cassin-Sackett, Katherine Maria McClure, Taylor Callicrate, Eben H. Paxton, Robert C. Fleischer
Impacts of lake elevation decline on spawning habitat of a critical, native forage species Impacts of lake elevation decline on spawning habitat of a critical, native forage species
Objective Lake elevation decline is a global phenomenon with pronounced effects in arid regions that changes the characteristics of nearshore habitat area available to lacustrine spawners, potentially impacting recruitment and whole-lake food web dynamics. Our objective was to understand the potential effects of lake elevation decline on spawning habitat for the Tui Chub Siphateles...
Authors
Sarah Barnes, Robert Al-Chokhachy, Phaedra E. Budy
Manipulation of the Symbiodiniaceae microbiome confers multigenerational impacts on symbioses and reproductive ecology of its Exaiptasia diaphana host Manipulation of the Symbiodiniaceae microbiome confers multigenerational impacts on symbioses and reproductive ecology of its Exaiptasia diaphana host
Symbiodiniaceae-associated microbiota strongly influence cnidarian symbioses. We systematically reduced the bacterial and fungal communities associated with Symbiodiniaceae to study potential effects on the cnidarian holobiont Exaiptasia diaphana (Aiptasia). Clonal anemones were inoculated with xenic Breviolum minutum (SSB01) and microbiome-manipulated cultures after antibacterial or...
Authors
Mark McCauley, Federica Montesanto, Samuel A. Bedgood, Cody Miner, Keyla Plichon, Virginia M. Weis, Sandra Loesgen
Satellite tracking reveals heavy use of local MPAs by green turtles (Chelonia mydas) nesting in southeast Florida, USA Satellite tracking reveals heavy use of local MPAs by green turtles (Chelonia mydas) nesting in southeast Florida, USA
Florida hosts a regionally important nesting aggregation of green turtles (Chelonia mydas) in the North Atlantic, yet internesting and post-nesting movements for this rookery remain poorly understood. Here, we used satellite telemetry to track 23 green turtles nesting on southeast Florida beaches from 2017 to 2021 to investigate their spatial ecology and use of marine protected areas...
Authors
Glenn D. Goodwin, Kristen Hart, Abby C. Evans, Derek A. Burkholder
Movement characterizations of stocked juvenile lake sturgeon (Acipenser fulvescens) within the Genesee River, NY Movement characterizations of stocked juvenile lake sturgeon (Acipenser fulvescens) within the Genesee River, NY
Knowledge of the movements of post-stocked juvenile lake sturgeon (Acipenser fulvescens) within and beyond the Genesee River of New York is limited. Describing lake sturgeon post-stocking movements could further the understanding of population structure and the delineation of nursery habitat. This project aimed to characterize the movements of juvenile sturgeon by tagging and tracking 69...
Authors
Kyle T. Morton, Dimitry Gorsky, Dawn E. Dittman, Matthew E. Altenritter
Electric field-induced detachment and vibration analysis for Sea Lamprey Electric field-induced detachment and vibration analysis for Sea Lamprey
Objective: Sea lamprey Petromyzon marinus, a known ecological threat to native fish populations in the Great Lakes, use their oral suction disc to navigate challenging environments when moving upstream to spawn. This study investigated the physiological response of adult sea lamprey to detach under pulsed direct current electric fields. Methods: Adult sea lampreys in an attaching...
Authors
Muhamad Yusuf Bin Yaacob, Ian González-Afanador, Scott M. Miehls, Xiaobo Tan, Nelson Sepúlveda
Emigration probabilities and survival estimates of stocked juvenile lake sturgeon (Acipenser fulvescens) within the Genesee River, NY Emigration probabilities and survival estimates of stocked juvenile lake sturgeon (Acipenser fulvescens) within the Genesee River, NY
Knowledge of juvenile lake sturgeon (Acipenser fulvescens) survival is important both to understanding changes in population abundance and for assessing the efficacy of management practices like stocking. High mortality rates of juvenile fish are partially mitigated by stocking hatchery-raised individuals; however, survival of post-stocked lake sturgeon remains lower compared to survival...
Authors
Kyle T. Morton, Dimitry Gorsky, Dawn E. Dittman, Matthew E. Altenritter
Fish composition in a complex freshwater estuary: Environmental DNA metabarcoding versus capture surveys Fish composition in a complex freshwater estuary: Environmental DNA metabarcoding versus capture surveys
Objective The potential for environmental DNA (eDNA) to disperse widely from source organisms enables high detection efficiency but raises questions about eDNA's ability to differentiate fine-scale spatial patterns relative to conventional fish capture data.Methods We evaluate these questions in the St. Louis River estuary—a hydrologically and spatially complex coastal system within Lake...
Authors
Anett S Trebitz, Joel C. Hoffman, Gregory S. Peterson, Chelsea I. Hatzenbuhler, Erik M. Pilgrim, Sara L. Okum, W. Lindsay Chadderton, Andrew J. Tucker, Nicholas Bogyo, Jared Thomas Myers
Assessing diet and genotyping success of goat pellet surveys from 2019 in Glacier National Park Assessing diet and genotyping success of goat pellet surveys from 2019 in Glacier National Park
Fecal pellets contain genetic information and can be used to identify individuals, their diet, and more. Individual identification can be useful in understanding movements of individuals, developing population estimates, assessing vital rates, genetic diversity and structure, and evaluating trends over time (e.g., Epps et al 2024). Successful genotyping depends on the quality of the...
Authors
Salix Scoresby, Lindsay M Dose, Jami Belt, Tabitha A. Graves
Newly released Grand Canyon flash flood incident report Newly released Grand Canyon flash flood incident report
No abstract available.
Authors
Erica Paige Byerley