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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 43327

Rapid colonization of a Hawaiian restoration forest by a diverse avian community Rapid colonization of a Hawaiian restoration forest by a diverse avian community

Deforestation of tropical forests has led to widespread loss and extirpation of forest bird species around the world, including the Hawaiian Islands which have experienced a dramatic loss of forests over the last 200–800 years. Given the important role birds play in forest ecosystem functions via seed dispersal and pollination, a bird community's response to forest restoration is an...
Authors
Eben H. Paxton, Stephanie G. Yelenik, Tracy E. Borneman, Eli Rose, Richard J. Camp, Steve J. Kendall

Bioenergetic evaluation of diel vertical migration by bull trout (Salvelinus confluentus) in a thermally stratified reservoir Bioenergetic evaluation of diel vertical migration by bull trout (Salvelinus confluentus) in a thermally stratified reservoir

Many species living in deeper lentic ecosystems exhibit daily movements that cycle through the water column, generally referred to as diel vertical migration (DVM). In this study, we applied bioenergetics modelling to evaluate growth as a hypothesis to explain DVM by bull trout (Salvelinus confluentus) in a thermally stratified reservoir (Ross Lake, WA, USA) during the peak of thermal
Authors
Madeleine Eckmann, Jason B. Dunham, Edward J. Connor, Carmen A. Welch

Lake trout spawning and habitat assessment at Stony Island Reef Lake trout spawning and habitat assessment at Stony Island Reef

Lake trout stocking began in the 1970s as part of a binational effort to restore a self-sustaining population of lake trout in Lake Ontario. Despite 48 years of restoration stocking, lake trout in Lake Ontario have not reestablished a self-sustaining population. Spawning surveys done at Stony Island Reef (SIR) in eastern Lake Ontario in 1987 and 1989 documented lake trout egg deposition...
Authors
Stacy Furgal, Brian F. Lantry, Brian Weidel, John M. Farrell, Dimitry Gorsky, Zy Biesinger

Agriculture Agriculture

Agricultural production is a fundamental activity conducted on 45% of the U.S. land area, 55% of Mexico’s land area, and 7% of Canada’s land area (World Bank 2016). Because of this vast spatial extent and the strong role that land management plays in how agricultural ecosystems function, agricultural lands and activities represent a large portion of the North American carbon budget...
Authors
Alexander N. Hristov, Jane M. F. Johnson, Charles W. Rice, Molly E. Brown, Richard T. Conant, Stephen J. Del Grosso, Noel P. Gurwick, C. Alan Rotz, Upendra M. Sainju, R. Howard Skinner, Tristram O. West, Benjamin R. K. Runkle, Henry Janzen, Sasha C. Reed, Nancy Cavallaro, Gyami Shrestha

Introduction to the Wetland Book 1: Wetland structure and function, management, and nethods Introduction to the Wetland Book 1: Wetland structure and function, management, and nethods

The Wetland Book 1 is designed as a ‘first port-of-call’ reference work for information on the structure and functions of wetlands, current approaches to wetland management, and methods for researching and understanding wetlands. Contributions by experts summarize key concepts, orient the reader to the major issues, and support further research on such issues by individuals and...
Authors
Nick C. Davidson, Beth A. Middleton, Robert J. McInnes, Mark Everard, Kenneth Irvine, Anne A. Van Dam, C. Max Finlayson

Life history with emphasis on geographic variation Life history with emphasis on geographic variation

Every organism is defined by a set of vital rates that evolve to enhance lifetime reproductive fitness and survival of individuals and their progeny. These traits vary due to the complex but sometimes predictable interactions between individuals, populations and their environments. Collectively, these attributes are referred to as life history traits and include age and size of maturity...
Authors
Jeffrey E. Lovich, J. Whitfield Gibbons, Kathryn Greene

Habitat Needs Assessment‐II for the Upper Mississippi River Restoration Program: Linking science to management perspectives Habitat Needs Assessment‐II for the Upper Mississippi River Restoration Program: Linking science to management perspectives

The Upper Mississippi River Restoration (UMRR) Program vision statement is for a healthier and more resilient Upper Mississippi River ecosystem that sustains the river’s multiple uses. To address this vision, the UMRR Program recently developed a suite of 12 indicators that quantify aspects of ecosystem health and resilience (i.e., connectivity, redundancy and diversity, and controlling...
Authors
Kat McCain, Sara Schmuecker, Nathan R. De Jager

Fatality estimator user’s guide Fatality estimator user’s guide

This publication is the User's Guide for software developed to estimate wildlife fatalities at wind-power facilities, although the software is applicable to a variety of circumstances in which the objective is to estimate the size of a superpopulation and the probability of detection of the individuals is less than one. Simple counts of carcasses do not accurately reflect fatality and do...
Authors
Manuela M. Huso, Nicholas Som, Lew Ladd

The Southern Appalachian Brook Trout management conundrum: What should restoration look like in the 21st Century? The Southern Appalachian Brook Trout management conundrum: What should restoration look like in the 21st Century?

Brook Trout Salvelinus fontinalis in the southern Appalachian portion of their range have been isolated in remote headwater systems for millennia. Recent genetic investigations indicate extremely low allelic diversity, heterozygosity and effective population sizes in many streams. In populations restored using multiple source stocks, limited introgression has been observed despite source...
Authors
Matt A. Kulp, Shawna Mitchell, David C. Kazyak, Bernard R. Kuhajda, Jason Henegar, T. Casey Weathers, Anna George, Joshua R. Ennen, Tim King

Characterization of microsatellite loci for the Gulf Coast waterdog (Necturus beyeri) using paired-end Illumina shotgun sequencing and cross-amplification in other Necturus Characterization of microsatellite loci for the Gulf Coast waterdog (Necturus beyeri) using paired-end Illumina shotgun sequencing and cross-amplification in other Necturus

Amphibians are one of the most threatened groups of vertebrates (Stuart et al. 2004; Wake and Vredenburg 2008), and the application of molecular techniques to amphibian ecology and genetics has dramatically improved our ability to conserve species and populations (see Shaffer et al. [2015] for review). Microsatellites, tandem repeats of two to six nucleotides in the nuclear genome, are...
Authors
Jennifer Y. Lamb, Brian R. Kreiser, Hardin Waddle, Carl P. Qualls
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