Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42712
Group inverse sampling: An economical approach to inverse sampling Group inverse sampling: An economical approach to inverse sampling
Inverse sampling is an adaptive design in the sense that the final sampling effort during a search for rare events will depend on what is found during the survey. Conventional inverse sampling (CIS) designs successively select individual sampling units to find, for example, the k th rare event. In real sampling situations, use of successive one‐by‐one sampling can be cost prohibitive...
Authors
Bardia Panahbehagh, David R. Smith
Case studies of riparian and watershed restoration in the southwestern United States—Principles, challenges, and successes Case studies of riparian and watershed restoration in the southwestern United States—Principles, challenges, and successes
Globally, rivers and streams are highly altered by impoundments, diversions, and stream channelization associated with agricultural and water delivery needs. Climate change imposes additional challenges by further reducing discharge, introducing variability in seasonal precipitation patterns, and increasing temperatures. Collectively, these changes in a river or stream’s annual hydrology...
Authors
Barbara E. Ralston, Daniel A. Sarr
Atypical feeding behavior of Long-tailed Ducks in the wake of a commercial fishing boat while clamming Atypical feeding behavior of Long-tailed Ducks in the wake of a commercial fishing boat while clamming
A foraging group of Clangula hyemalis (Long-tailed Duck) was observed on 10 February 2010 diving behind a commercial boat that was clamming near Monomoy Island, Nantucket Sound, MA. We used a shotgun to collect 9 of the ducks, and our analyses of gizzard and gullet (esophagus and proventriculus) revealed 37 food items in the gizzard and 16 in the gullet. Mollusca were the dominant food...
Authors
Matthew Perry, Peter C. Osenton, Timothy P. White
Research, monitoring, and evaluation of emerging issues and measures to recover the Snake River Fall Chinook Salmon ESU, 1/1/2016 - 12/31/2016 Research, monitoring, and evaluation of emerging issues and measures to recover the Snake River Fall Chinook Salmon ESU, 1/1/2016 - 12/31/2016
The portion of the Snake River fall Chinook Salmon Oncorhynchus tshawytscha ESU that spawns upstream of Lower Granite Dam transitioned from low to high abundance during 1992–2016 in association with U.S. Endangered Species Act recovery efforts and other federally mandated actions. This annual report focuses on (1) numeric and habitat use responses by natural- and hatchery-origin spawners...
Authors
William P. Connor, Frank L. Mullins, Kenneth F. Tiffan, John M. Plumb, Russell W. Perry, John M. Erhardt, Rulon J. Hemingway, Brad K. Bickford, Tobyn N. Rhodes
Reclamation after oil and gas development does not speed up succession or plant community recovery in big sagebrush ecosystems in Wyoming Reclamation after oil and gas development does not speed up succession or plant community recovery in big sagebrush ecosystems in Wyoming
Article for intended outlet: Restoration Ecology. Abstract: Reclamation is an application of treatment(s) following a disturbance to promote succession and accelerate the return of target conditions. Previous studies have framed reclamation in the context of succession by studying its effectiveness in re-establishing late-successional plant communities. Re-establishment of these plant...
Authors
Caitlin M. Rottler, Ingrid C. Burke, Kyle A. Palmquist, John B. Bradford, William K. Lauenroth
Snake River Fall Chinook Salmon life history investigations Snake River Fall Chinook Salmon life history investigations
Predation by nonnative fishes is one factor that has been implicated in the decline of juvenile salmonids in the Pacific Northwest. Impoundment of much of the Snake and Columbia rivers has altered food webs and created habitat favorable for species such as Smallmouth Bass Micropterus dolomieu. Smallmouth Bass are common throughout the Columbia River basin and have become the most...
Authors
John M. Erhardt, Brad K. Bickford, Rulon J. Hemingway, Tobyn N. Rhodes, Kenneth F. Tiffan
Preface to the special issue “Impact of omics on comparative immunology” Preface to the special issue “Impact of omics on comparative immunology”
No abstract available.
Authors
Pierre Boudinot, Unni Grimholt, John D. Hansen
Renibacterium salmoninarum Renibacterium salmoninarum
No abstract available.
Authors
Diane G. Elliott
Infectious haematopoietic necrosis virus Infectious haematopoietic necrosis virus
Infectious haematopoietic necrosis virus (IHNV) is a Rhabdovirus that causes significant disease in Pacific salmon (Oncorhynchus spp.), Atlantic salmon (Salmo salar), and rainbow and steelhead trout (O. mykiss). IHNV causes necrosis of the haematopoietic tissues, and consequently it was named infectious haematopoietic necrosis. This virus is waterborne and may transmit horizontally and...
Authors
Jo-Ann Leong, Gael Kurath
Assessment of PIT tag retention and post-tagging survival in metamorphosing juvenile Sea Lamprey Assessment of PIT tag retention and post-tagging survival in metamorphosing juvenile Sea Lamprey
Background: Passive integrated transponder (PIT) tags have been used to document and monitor the movement or behavior of numerous species of fishes. Data on short-term and long-term survival and tag retention are needed before initiating studies using PIT tags on a new species or life stage. We evaluated the survival and tag retention of 153 metamorphosing juvenile Sea Lamprey Petromyzon...
Authors
Lee G. Simard, V. Alex Sotola, J. Ellen Marsden, Scott M. Miehls
Influence of temperature on the efficacy of homologous and heterologous DNA vaccines against viral hemorrhagic septicemia in Pacific Herring Influence of temperature on the efficacy of homologous and heterologous DNA vaccines against viral hemorrhagic septicemia in Pacific Herring
Homologous and heterologous (genogroup Ia) DNA vaccines against viral hemorrhagic septicemia virus (genogroup IVa) conferred partial protection in Pacific Herring Clupea pallasii. Early protection at 2 weeks postvaccination (PV) was low and occurred only at an elevated temperature (12.6°C, 189 degree days), where the relative percent survival following viral exposure was similar for the...
Authors
Lucas Hart, Niels Lorenzen, Katja Einer-Jensen, Maureen K. Purcell, Paul Hershberger
Maternal transfer of mercury to songbird eggs Maternal transfer of mercury to songbird eggs
We evaluated the maternal transfer of mercury to eggs in songbirds, determined whether this relationship differed between songbird species, and developed equations for predicting mercury concentrations in eggs from maternal blood. We sampled blood and feathers from 44 house wren (Troglodytes aedon) and 34 tree swallow (Tachycineta bicolor) mothers and collected their full clutches (n =...
Authors
Joshua T. Ackerman, C. Alex Hartman, Mark P. Herzog