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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 41554

Exposure to and biomarker responses from legacy and emerging contaminants along three drainages in the Milwaukee Estuary, Wisconsin, USA

Legacy contaminants and contaminants of emerging concern (CECs) were assessed in tree swallow (Tachycineta bicolor) tissue and diet samples from three drainages in the Milwaukee estuary, Wisconsin, USA, to understand exposures and possible biomarker responses. Two remote Wisconsin lakes were assessed for comparative purposes. Bioaccumulative classes of contaminants, such as polybrominated diphenyl
Authors
Christine M. Custer, Thomas W. Custer, Paul Dummer, Sandra L. Schultz, Natalie K. Karouna-Renier, Chi Yen Tseng, Cole W. Matson

Assessing trade-offs in developing a landscape-scale nest monitoring programme for a threatened shorebird

Effective monitoring of wildlife species requires thorough planning and development of survey programmes that can address management and conservation objectives. Decisions about monitoring programmes include where to survey, survey design and how much effort to allocate at survey sites are typically predicated on limited budgets and available resources. When the scope of inference requires monitor
Authors
Kristen S. Ellis, Michael J. Anteau, Garrett J. MacDonald, Megan Ring, Mark H. Sherfy, Rose J. Swift, Dustin L. Toy

The chytrid insurance hypothesis: Integrating parasitic chytrids into a biodiversity–ecosystem functioning framework for phytoplankton–zooplankton population dynamics

In temperate lakes, eutrophication and warm temperatures can promote cyanobacteria blooms that reduce water quality and impair food-chain support. Although parasitic chytrids of phytoplankton might compete with zooplankton, they also indirectly support zooplankton populations through the “mycoloop”, which helps move energy and essential dietary molecules from inedible phytoplankton to zooplankton.
Authors
András Abonyi, Johanna Fornberg, Serena Rasconi, Robert Ptacnik, Martin J. Kainz, Kevin D. Lafferty

Microplastic-mediated new mechanism of liver damage: From the perspective of the gut-liver axis

Microplastics (MPs) are environmental contaminants that are present in all environments and can enter the human body, accumulate in various organs, and cause harm through the ingestion of food, inhalation, and dermal contact. The connection between bowel and liver disease and the interplay between gut, liver, and flora has been conceptualized as the “gut-liver axis”. Microplastics can alter the st
Authors
Xiaomei Wang, Kaili Deng, Pei Zhen Zhang, Qiqing Chen, Jason Tyler Magnuson, Wenhui Qiu, Yuping Zhou

Videographic monitoring at caves to estimate population size of the endangered yǻyaguak (Mariana swiftlet) on Guam

The yǻyaguak (Mariana swiftlet; Aerodramus bartschi) is an endangered cave-nesting species historically found on Guam and the southern Mariana Islands, Micronesia. The population on Guam has been severely affected by the introduction of the brown treesnake Boiga irregularis. Population status assessments have, however, been challenging due to the limitations of traditional counting methods, which
Authors
P. Marcos Gorresen, Paul M. Cryan, Megan Parker, Frank Alig, Melia Gail Nafus, Eben H. Paxton

Monitoring of wave, current, and sediment dynamics along the Fog Point Living Shoreline, Glenn Martin National Wildlife Refuge, Maryland

Living shorelines with salt marsh species, rock breakwaters, and sand nourishment were built along the coastal areas in the Glenn Martin National Wildlife Refuge, Maryland, in 2016 in response to Hurricane Sandy (2012). The Fog Point living shoreline at Glenn Martin National Wildlife Refuge was designed with the “headland - breakwater - embayment” pattern. Scientists from the U.S. Geological Surve
Authors
H. Wang, Q. Chen, W.D. Capurso, N. Wang, L.M. Niemoczynski, M. Whitbeck, L. Zhu, G.A. Snedden, C.A. Wilson, M.S. Brownley

A systematic review of the effects of climate variability and change on black and brown bear ecology and interactions with humans

Climate change poses a pervasive threat to humans and wildlife by altering resource availability, changing co-occurrences, and directly or indirectly influencing human-wildlife interactions. For many wildlife agencies in North America, managing bears (Ursus spp.) and human-bear interactions is a priority, yet the direct and indirect effects of climate change are exacerbating management challenges.
Authors
Katherine Anne Kurth, Kate Malpeli, Joseph D. Clark, Heather E. Johnson, Frank T. van Manen

Identifying conservation introduction sites for endangered birds through the integration of lidar-based habitat suitability models and population viability analyses

Similar to other single-island endemic Hawaiian honeycreepers, the critically endangered ‘ākohekohe (Palmeria dolei) is threatened by climate-driven disease spread. To avert the imminent risk of extinction, managers are considering novel measures, including the conservation introduction (CI) of ‘ākohekohe from Maui to higher elevation habitats on the Island of Hawai’i. This study integrated lidar-
Authors
Lucas Fortini, Erica Gallerani, Christopher C Warren, Eben H. Paxton

Establishing fluvial silicon regimes and their stability across the Northern Hemisphere

Fluvial silicon (Si) plays a critical role in controlling primary production, water quality, and carbon sequestration through supporting freshwater and marine diatom communities. Geological, biogeochemical, and hydrological processes, as well as climate and land use, dictate the amount of Si exported by streams. Understanding Si regimes—the seasonal patterns of Si concentrations—can help identify
Authors
Keira Johnson, Kathi Jo Jankowski, Joanna C. Carey, Nicholas Lyon, William H. McDowell, Arial J. Shogren, Adam S. Wymore, Lienne R. Sethna, Wilfred M. Wollheim, Amanda Poste, Pirkko Kortelainen, Ruth C. Heindel, Hjalmar Laudon, Antti Raike, Jeremy B. Jones, Diane M. McKnight, Paul Julian, Sidney A. Bush, Pamela L. Sullivan

Vegetation responses to large dam removal on the Elwha River, Washington, USA

Large dam removal can trigger changes to physical and biological processes that influence vegetation dynamics in former reservoirs, along river corridors downstream of former dams, and at a river’s terminus in deltas and estuaries. We present the first comprehensive review of vegetation response to major fluvial disturbance caused by the world’s largest dam removal. After being in place for nearly
Authors
Patrick B. Shafroth, Laura G. Perry, James M. Helfield, Joshua Chenoweth, Rebecca L. Brown

Population genetics of museum specimens indicate decreasing genetic resiliency: The case of two bumble bees of conservation concern

Genetic resiliency is the likelihood that populations retain sufficient genetic diversity to respond to environmental change. It is rarely examined through time in conservation genetic studies due to challenges of acquiring and sequencing historical specimens. Focusing on populations of two sibling bumble bee species of conservation concern with different recent patterns of decline, we used museum
Authors
Ashley Rhode, Michael Branstetter, Karen E. Mock, Joyce Knoblett, David Pilliod, Jeffrey Everett, Paul Galpern, James P. Strange

Ecology of an insular snake assemblage in coastal Maine

Wildlife populations at the peripheries of their distributions or on isolated islands often display divergent and poorly understood morphological or life-history characteristics compared to core populations. We used a capture–mark–recapture dataset collected over a 19-year period to characterize a northern, insular snake assemblage in coastal Maine. We captured 611 individual snakes of 4 species (
Authors
John D. Willson, Ethan J. Royal, Jacquelyn C. Guzy, Meredith C. Swartwout, Chelsea S. Kross