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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 43280

Non-destructive sampling of larval amphibians shows tail tissues reflect whole-body methylmercury concentrations and trophic-related differences in bioaccumulation Non-destructive sampling of larval amphibians shows tail tissues reflect whole-body methylmercury concentrations and trophic-related differences in bioaccumulation

Mercury (Hg), and specifically methylmercury (MeHg), is a contaminant of global concern to humans and wildlife, but there is still limited understanding of its effects on many taxa. Amphibians are closely associated with water, where Hg is converted to MeHg, and high concentrations of MeHg can reduce survival of amphibians in the wild. However, limited non-lethal proxies exist for...
Authors
Brian J. Tornabene, Blake Hossack, Daniel A. Grear, Thomas L. Anderson, Brad Glorioso, Hardin Waddle, Jon D Davenport, Collin Eagles-Smith, Caitlin T. Rumrill, Kelly L. Smalling

Culturing emerging, imperiled, and poorly understood fishes Culturing emerging, imperiled, and poorly understood fishes

Most fish hatcheries and farms raise fish for food, to supply the bait and ornamental fish trades, or to create or enhance recreational and commercial fishing opportunities. Culture methods for these species are well established and are described in various chapters of this book. However, a growing number of facilities are responsible for cultivation of emerging, imperiled, or lesser...
Authors
James Candrl, Theo Smith

Mississippi’s resiliency and changing environmental conditions Mississippi’s resiliency and changing environmental conditions

Mississippi is experiencing shifts in environmental conditions, many of which are expected to intensify in the coming decades, and will have important implications for ecosystems, species, and natural resource management across the state. Historical climate analyses and downscaled projections summarized for the state’s Environmental Protection Agency (EPA) level III Ecoregions show that
Authors
Hailey Nicole Shanovich, Alex Lamle, Louise Vaughn

Whitefishes—Coregonus spp. Whitefishes—Coregonus spp.

Coregonines represent a diverse group of fishes of the Salmonidae subfamily Coregoninae that have ecological, cultural, and economical importance throughout their range. They are prey for other commercially and recreationally important predatory fish and are harvested for human consumption (Cleland 1982). Coregonines are generally cool- and coldwater species distributed across the...
Authors
Marc Chalupnicki, Gregg Mackey, John A. Sweka, Steve Davis, Kevin Loftus, Timothy Drew

Review of Grasse River Lake Sturgeon habitat use and possible post-Superfund remediation agency actions Review of Grasse River Lake Sturgeon habitat use and possible post-Superfund remediation agency actions

The Grass River (hereafter Grasse River) historically served as a major source of fisheries production for the Saint Lawrence River (hereafter St. Lawrence River) basin, providing critical spawning habitat and support for other life history stages of numerous species including the culturally and ecologically significant Lake Sturgeon (Acipenser fulvescens). Decades of environmental...
Authors
Dawn Dittman, Edward Roseman, Taaja Tucker-Silva, Robin L. DeBruyne, Jason Fischer

High and dry: The persistence of diverse coastal marsh communities depends on available upland area and connection to surrounding waters High and dry: The persistence of diverse coastal marsh communities depends on available upland area and connection to surrounding waters

Sea-level-rise and alterations to natural hydrology have contributed to coastal land loss. To combat coastal land loss and maintain the ecosystem services provided by marshes, marsh creation has been broadly implemented. Marsh creation projects can be performed in conjunction with the construction of elevated terrestrial ridges that seek to mimic historic delta-formed distributary ridges...
Authors
Erik Naiti-Johnson, Jonathan M. Willis, Gregg A. Snedden, Giovanna McClenachan

A simplified two-station approach for modeling metabolism in dam tailwaters subject to diel flow variation A simplified two-station approach for modeling metabolism in dam tailwaters subject to diel flow variation

Tailwaters are ubiquitous and highly managed ecosystems whose food webs often rely disproportionately on autochthonous energy. In situ continuous dissolved oxygen data are increasingly being used to estimate gross primary productivity and ecosystem respiration in rivers, but this approach is complicated in tailwaters, where upriver discontinuities (i.e., dams) violate commonly employed...
Authors
Ian Wesley Bishop, Bridget R. Deemer, Theodore Kennedy, Robert A. Payn, Robert O. Hall, Charles B. Yackulic

Mercury biomagnification across food webs with varying non-native fish presence: Implications for native fish conservation in the upper Colorado River Basin Mercury biomagnification across food webs with varying non-native fish presence: Implications for native fish conservation in the upper Colorado River Basin

Environmental contaminants and non-native species introductions negatively affect aquatic ecosystem conservation. Mercury (Hg) accumulates within food webs where it can biomagnify to toxic concentrations, which can be affected by altered trophic relationships from non-native species. This study examined Hg concentrations (n samples = 655) and stable carbon and nitrogen isotope (n = 746)
Authors
Charles F. Wahl, Natalie K. Day, Travis S. Schmidt, James J. Roberts, Jessica E. Brandt, Craig A. Stricker

Growth of a threatened desert fish becomes resource dependent when released from temperature limitation in a regulated river Growth of a threatened desert fish becomes resource dependent when released from temperature limitation in a regulated river

1. Growth of ectotherms typically positively correlates with increasing temperature towards an optimal temperature range, followed by a decline in growth when temperatures exceed the optimal temperature range for that organism. When temperature is within or close to the optimal range, food availability and other environmental factors can play important roles in modifying growth rates...
Authors
Lindsay Erika Hansen, Drew Elliot Eppehimer, Maria C. Dzul, Bridget R. Deemer, Charles B. Yackulic

Transcriptional changes in wild Yukon River Chinook Salmon associated with Ichthyophonus infections Transcriptional changes in wild Yukon River Chinook Salmon associated with Ichthyophonus infections

Objective We compared differentially expressed genes in Chinook Salmon Oncorhynchus tshawytscha with three divergent Ichthyophonus statuses (undetected, subclinical infections, or clinical disease; n = 100) to investigate associated transcriptomic responses. Disease associated with the fish parasite Ichthyophonus sp. was first diagnosed in adult Chinook Salmon from the Yukon River in the...
Authors
Lizabeth Bowen, Vanessa R. von Biela, Jayde A. Ferguson, Shannon C. Waters-Dynes, Amy M. Regish, Michael P. Carey, Zachary Liller, Morag Clinton, Paul Hershberger, Christian E. Zimmerman

A sea ice entrapment event in the southern Chukchi Sea: Analysis and prediction A sea ice entrapment event in the southern Chukchi Sea: Analysis and prediction

Amplified Arctic warming is reducing sea ice cover, which is driving an increase in geopolitical interest in the region as it offers the possibility of reducing shipping times between Asia, Europe, and eastern North America, at the risk of increased ice hazards. Here, we examine the case of the Norseman II research ship that was trapped by sea ice in the southern Chukchi Sea for 14 days...
Authors
G. W.K. Moore, Michael A. Steele, Jinlun Zhang, Axel J. Schweiger, Thomas J. Ballinger, Irina S. Trukhanova, Michael Lawson, William S. Beatty, Scott Hameister

Loss and transformation of coastal wetlands due to global change in the conterminous United States: Past, present, and future Loss and transformation of coastal wetlands due to global change in the conterminous United States: Past, present, and future

Coastal wetlands are being transformed by global change, impacting the ecological and societal benefits provided by these ecosystems. Synthesizing knowledge of historical and expected future transformations in coastal wetlands can help inform forward-looking planning and stewardship efforts. Here, we review anticipated future ecological transformations in coastal wetlands of the...
Authors
Michael J. Osland, Bogdan Chivoiu, Kevin J. Buffington, Kristin Byrd, Joel Carr, Judith Z. Drexler, Nicholas Enwright, Neil K. Ganju, James B. Grace, Eric E. Grossman, Glenn R. Guntenspergen, Kurt P. Kowalski, Ken W. Krauss, Jessica R. Lacy, Gregory B. Noe, Davina L. Passeri, Stephanie Romanach, Christopher F. Smith, Camille L. Stagg, Karen M. Thorne, Janet R. Keough
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