Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 43455
Cost-efficient filtration and replication strategies match or exceed detection sensitivity for marine eDNA diversity at an intertidal site under a standardized laboratory workflow Cost-efficient filtration and replication strategies match or exceed detection sensitivity for marine eDNA diversity at an intertidal site under a standardized laboratory workflow
Optimizing environmental DNA (eDNA) metabarcoding to maximize species detection while minimizing costs and effort remains a challenge, particularly in high-throughput workflows. In the marine intertidal zone off Point Conception, California, we compared eDNA richness accumulation between filtration approaches that differed in filter type and downstream processing, field and laboratory...
Authors
Nicholas O. Schulte, Joseph M. Craine, Jessica K. Devitt, Galen W. Miller, Steven D. Gaines, Kevin D. Lafferty, Jessica M. Altstatt
Creation of aerial camera system boresight installations in Bangor, Maine; Monroe, Louisiana; and Bassville Park, Florida Creation of aerial camera system boresight installations in Bangor, Maine; Monroe, Louisiana; and Bassville Park, Florida
Aerial camera systems rely on boresights for defining internal and external metrics. The U.S. Fish and Wildlife Service’s Migratory Bird Surveys Branch required boresights to calibrate their camera systems for creating georeferenced imagery that can then be used in geographic information systems. The U.S. Geological Survey created high-accuracy boresight installations in Bangor, Maine...
Authors
Andrew C. Strassman, Sierra M. Schuster, Jamie A. Schoen, Aaron C. Murphy
Establishing conservation benchmarks for threatened Bull Trout using spawner-recruitment relationships Establishing conservation benchmarks for threatened Bull Trout using spawner-recruitment relationships
Understanding the relationship between breeding adults and juvenile recruitment is fundamental to conserving at-risk species. Knowing whether recruitment is depensatory or compensatory at low adult abundances can aid in developing conservation strategies and recovery goals. However, this relationship requires long-term monitoring of two life stages, which can be costly and uncommon...
Authors
Hayley Corrine Glassic, Robert Al-Chokhachy, Leo R. Rosenthal, Matthew C. Boyer, Thomas Weaver, Kristen L. Cook, David Schmetterling, Ryan P. Kovach, Clint C. Muhlfeld, Timothy Cline
Combining branching processes and Allee effects into an integral projection model to assess invasion risk Combining branching processes and Allee effects into an integral projection model to assess invasion risk
Invasive species threaten both ecological systems and economies. Successful establishment is governed partly by demographic stochasticity, where random individual-level variation can significantly influence invasion dynamics. A critical factor is the Allee effect, which describes reduced population growth at low densities, potentially serving as a barrier to persistence. Size-dependent...
Authors
James P. Pierce, Cynthia Kolar Tam, Joseph J. Parkos, Grace L. Loppnow, Mark W. Fritts, Alison A. Coulter, Richard A. Erickson
Seasonal space use and spatial overlap of lake sturgeon populations inhabiting Lake St. Clair Seasonal space use and spatial overlap of lake sturgeon populations inhabiting Lake St. Clair
Multi-jurisdictional management of adult lake sturgeon (Acipenser fulvescens) requires characterizing seasonal dynamics of their spatial distributions. Despite decades of research into lake sturgeon movement ecology, system-wide spatiotemporal behavior remains poorly understood in large lakes, particularly those with metapopulations differentiated by spawning river or migratory...
Authors
Skye D. Fissette, Andrew S. Briggs, Charles C. Krueger, Darryl W. Hondorp
Cross-ecosystem transfer of microplastics via emergent aquatic insects to riparian spiders in a municipal wastewater-impacted system Cross-ecosystem transfer of microplastics via emergent aquatic insects to riparian spiders in a municipal wastewater-impacted system
Microplastics (plastic particles ≤5 mm) are a persistent and widespread pollutant in aquatic ecosystems, where they can accumulate in the larvae of aquatic insects inhabiting benthic habitats. Aquatic insects cross aquatic-terrestrial boundaries through metamorphosis, yet few studies have investigated their role in transporting microplastics to terrestrial ecosystems as emergent adults...
Authors
Colleen M. Wardlaw, Karen A. Kidd, Brittany G. Perrotta, John Fast, Ryan S. Prosser
Black Carp Mylopharyngodon piceus reproductive development and maturation in the Mississippi River basin Black Carp Mylopharyngodon piceus reproductive development and maturation in the Mississippi River basin
Black Carp Mylopharyngodon piceus are native to most major east Asian drainages and are internationally cultured for use as a food-fish or a biological control for molluscs. We describe the reproductive biology of Black Carp from the growing invasive population in the Mississippi River basin through examination of incidental commercial fisheries and biologist captures. Our objectives...
Authors
Patrick Kroboth, Anne M. Herndon, Cayla Lynn Carlson, Fred Williams, Rachel Nicole Alvarez, Amy E. George
Serendipitous insight into pre-hatch microstructure formation in larval lake whitefish (Coregonus clupeaformis) otoliths Serendipitous insight into pre-hatch microstructure formation in larval lake whitefish (Coregonus clupeaformis) otoliths
Otoliths are useful tools to estimate daily age, growth, and ontogenetic shifts in the early life stages of fish, providing information to support management efforts. Little effort, however, has gone into the examination of pre-hatch increment development. To assess variation in pre-hatch otolith size and increment formation, lake whitefish (Coregonus clupeaformis) sagittal otoliths were...
Authors
Kaitlyn M. Dawson, Michael R. Lowe, Janet S. McConnell, Brad A. Buechel, Andrew M. Muir
Acute toxicity and tissue concentrations of 6PPD-quinone in Arctic grayling (Thymallus arcticus, Thymallinae) Acute toxicity and tissue concentrations of 6PPD-quinone in Arctic grayling (Thymallus arcticus, Thymallinae)
Studies of N-(1,3-dimethylbutyl)-N'-phenyl-p-phenylenediamine-quinone (6PPDQ) toxicity have identified sensitive and resistant species within the subfamily Salmoninae, but thus far fewer than 10 species, all in two genera (Oncorhynchus and Salvelinus), have shown sensitivity in experiments. The Arctic grayling (Thymallus arcticus, Salmonidae, Thymallinae) was extirpated from its range in...
Authors
David J. Riecks Soucek, Adam H. Moody, Rebecca A. Consbrock, James S. Candrl, Jeffery A. Steevens
An evaluation of next-generation biological control methods for the invasive brown treesnake in the Mariana Islands An evaluation of next-generation biological control methods for the invasive brown treesnake in the Mariana Islands
The brown treesnake (BTS) invasion in Guam continues to cause extensive ecological and economic damage, yet existing control tools cannot achieve islandwide suppression or eradication, highlighting the need for new strategies. This review evaluates the feasibility of classical and genetic biocontrol approaches for BTS and identifies priority knowledge gaps. Classical biocontrol, which...
Authors
Jonathan Q. Richmond, Tim Harvey-Samuel, Melia G. Nafus, Adam Alberto Perez, Mona Renee Bellinger, Antoinette J. Piaggio, Riley Taitingfong, Margaret Hunter, Robert D. Fisher
Leveraging the double uniparental inheritance of freshwater mussels to detect male spawning activity through eDNA Leveraging the double uniparental inheritance of freshwater mussels to detect male spawning activity through eDNA
Sampling aquatic habitats for environmental DNA (eDNA) has emerged as a valuable population monitoring tool, particularly for species that are difficult to survey with conventional methods. However, eDNA approaches are limited in their ability to provide demographic information, resulting in most applications focusing on documenting species presence and distributions. Advancing molecular...
Authors
Katy E. Klymus, Dannise V. Ruiz Ramos, Nathan Thompson, Catherine A. Richter, Sasha J. Tetzlaff, Aron D. Katz, Jeremy S. Tiemann, Mark D. Johnson, John Brant, Kenton Lohraff
Aspergillosis (Avian) case definition for wildlife Aspergillosis (Avian) case definition for wildlife
Diagnostic laboratories receive carcasses and samples for diagnostic evaluation and pathogen/toxin detection. Case definitions bring clarity and consistency to the evaluation process. Their use within and between organizations allows more uniform reporting of diseases and etiologic agents. The intent of a case definition is to provide scientifically based criteria for determining: (a) if...
Authors
Valerie Shearn-Bochsler, Brian Stevens, E. Jane Parmley, Kimberli J.G. Miller