Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42675
Assessing survey design for long-term population trend detection in piping plovers Assessing survey design for long-term population trend detection in piping plovers
Determining appropriate spatio-temporal scales for monitoring migratory shorebirds is challenging. Effective surveys must detect population trends without excessive or insufficient sampling, yet many programs lack formal evaluations of survey effectiveness. Using data from 2012 to 2019 on Louisiana’s barrier islands (Whiskey, west Raccoon, east Raccoon, and Trinity), we assessed how...
Authors
Eve Bohnett, Jessica Schulz, Robert C. Dobbs, Thomas Hoctor, Bilal Ahmad, Wajid Rashid, J. Hardin Waddle
Changes in aeolian saltation cloud properties with wind speed and ripples Changes in aeolian saltation cloud properties with wind speed and ripples
Aeolian sediment transport shapes landscapes on Earth and other planetary surfaces, yet key uncertainties remain in how the near-bed saltation cloud responds to changing wind and surface conditions. Leveraging recent advances in image-based particle tracking, we conducted wind tunnel experiments using high-speed imaging and Particle Tracking Velocimetry to quantify sand grain...
Authors
Madeline Margaret Kelley, Ian Walker, Mark Schmeeckle, Christy Swann, Ron Dorn, Michaela Roberts, Patrick O'Brien
Seasonal variation in bay-marsh sediment exchange through a back-barrier salt marsh tidal creek Seasonal variation in bay-marsh sediment exchange through a back-barrier salt marsh tidal creek
Salt marsh resilience to sea-level rise largely depends on the balance of sediment exchanges with surrounding bays. In this study, we investigate mechanisms that determine residual sediment fluxes using continuous measurements of bay-marsh sediment exchange conducted in a tidal creek spanning 13 months (753 tidal cycles) in an intertidal marsh recently subsidized with sediment via thin...
Authors
G.A. Snedden, S. Smith
Placing environmental DNA monitoring for new detections into perspective: Fishes in the Milwaukee River, Wisconsin Placing environmental DNA monitoring for new detections into perspective: Fishes in the Milwaukee River, Wisconsin
Invasive species management frameworks, such as the early detection of and rapid response to invasive species, use monitoring programs to detect new species occurrences. Resource managers use environmental DNA (eDNA) as one tool for these monitoring programs. An eDNA detection in a new location may lack perspective for resource managers and researchers because of the rarity of potential...
Authors
Richard Erickson, Patrick DeHaan, Nicholas Frohnauer, Cari-Ann Hayer, Keta L. Oettinger, Tariq Tajjioui, Kyle Von Ruden, Hailey M. Willner, Stephen Spear
Post-hatching maternal attendance in wild Burmese Pythons in southern Florida Post-hatching maternal attendance in wild Burmese Pythons in southern Florida
No abstract available.
Authors
Jacquelyn Guzy, Mark Sandfoss, John-Kaarli Rentof, Judith Baird-Lujano, Genesis Aponte Santiago, Jose Torres, Lisa McBride, Matthew Fox Metcalf, Amanda Kissel, Christina Romagosa, Amy Yackel Adams, Brandon Welty, Melissa Miller, Matthew McCollister, Frank Mazzotti, Kristen Hart
Exploring the importance of metapopulation dynamics with population control strategies for invasive silver carp in the upper Mississippi River Exploring the importance of metapopulation dynamics with population control strategies for invasive silver carp in the upper Mississippi River
Invasive bigheaded carps (Bighead Carp Hypophthalmichthys nobilis, Silver Carp Hypophthalmichthys molitrix, and their hybrids Hypophthalmichthys spp.) currently infest the Mississippi River Basin. Bigheaded carps can outcompete native species in invaded waters and can also transform the surrounding environment. Currently, resource managers seek to limit the population abundance of...
Authors
Kassidy Frame, Gregory Sandland, Charles Labuzzetta, Grace Loppnow, Jessica Stanton, Yu-Chun Kao, Richard Erickson
Bioaccumulation and transfer of per- and polyfluoroalkyl substances (PFAS) in a stream and riparian food web contaminated by food processing wastewater Bioaccumulation and transfer of per- and polyfluoroalkyl substances (PFAS) in a stream and riparian food web contaminated by food processing wastewater
We evaluated the bioaccumulation and transfer of per- and polyfluoroalkyl substances (PFAS) in a stream food web contaminated by a food processing facility. Abiotic (i.e., water, sediment, and foam) and biotic (i.e., algae, aquatic insect larvae and adults, fish, and riparian spiders) matrices were sampled upstream and downstream of the facility’s wastewater outfall. Compared with...
Authors
Christopher Kotalik, Laura Hubbard, Brittany Perrotta, David Walters, Dana W. Kolpin, James Gray, Alison Zachritz, Johanna Kraus, Carrie Givens, Gary Lamberti, Karen Kidd
Variation in gene expression across infection status and elevation in a Hawaiian honeycreeper Variation in gene expression across infection status and elevation in a Hawaiian honeycreeper
Introduced pathogens exert novel selection on hosts, and although many host species have experienced drastic population declines in the absence of adaptation, some hosts have adapted to highly virulent pathogens. For instance, mosquitoes and Plasmodium relictum introduced to the Hawaiian Islands have resulted in extinctions and catastrophic population declines due to avian malaria...
Authors
Loren Cassin-Sackett, Katherine McClure, Taylor Callicrate, Eben Paxton, Robert C. Fleischer
Impacts of lake elevation decline on spawning habitat of a critical, native forage species Impacts of lake elevation decline on spawning habitat of a critical, native forage species
Objective Lake elevation decline is a global phenomenon with pronounced effects in arid regions that changes the characteristics of nearshore habitat area available to lacustrine spawners, potentially impacting recruitment and whole-lake food web dynamics. Our objective was to understand the potential effects of lake elevation decline on spawning habitat for the Tui Chub Siphateles...
Authors
Sarah Barnes, Robert Al-Chokhachy, Phaedra Budy
Manipulation of the Symbiodiniaceae microbiome confers multigenerational impacts on symbioses and reproductive ecology of its Exaiptasia diaphana host Manipulation of the Symbiodiniaceae microbiome confers multigenerational impacts on symbioses and reproductive ecology of its Exaiptasia diaphana host
Symbiodiniaceae-associated microbiota strongly influence cnidarian symbioses. We systematically reduced the bacterial and fungal communities associated with Symbiodiniaceae to study potential effects on the cnidarian holobiont Exaiptasia diaphana (Aiptasia). Clonal anemones were inoculated with xenic Breviolum minutum (SSB01) and microbiome-manipulated cultures after antibacterial or...
Authors
Mark Mccauley, Federica Montesanto, Samuel Bedgood, Cody Miner, Keyla Plichon, Virginia Weis, Sandra Loesgen
Satellite tracking reveals heavy use of local MPAs by green turtles (Chelonia mydas) nesting in southeast Florida, USA Satellite tracking reveals heavy use of local MPAs by green turtles (Chelonia mydas) nesting in southeast Florida, USA
Florida hosts a regionally important nesting aggregation of green turtles (Chelonia mydas) in the North Atlantic, yet internesting and post-nesting movements for this rookery remain poorly understood. Here, we used satellite telemetry to track 23 green turtles nesting on southeast Florida beaches from 2017 to 2021 to investigate their spatial ecology and use of marine protected areas...
Authors
Glenn Goodwin, Kristen Hart, Abby Evans, Derek Burkholder
Fish composition in a complex freshwater estuary: Environmental DNA metabarcoding versus capture surveys Fish composition in a complex freshwater estuary: Environmental DNA metabarcoding versus capture surveys
Objective The potential for environmental DNA (eDNA) to disperse widely from source organisms enables high detection efficiency but raises questions about eDNA's ability to differentiate fine-scale spatial patterns relative to conventional fish capture data.Methods We evaluate these questions in the St. Louis River estuary—a hydrologically and spatially complex coastal system within Lake...
Authors
Anett Trebitz, Joel Hoffman, Gregory Peterson, Chelsea Hatzenbuhler, Erik Pilgrim, Sara Okum, W. Chadderton, Andrew Tucker, Nicholas Bogyo, Jared Myers