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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42710

Metabarcoding of fecal samples to determine herbivore diets: A case study of the endangered Pacific pocket mouse Metabarcoding of fecal samples to determine herbivore diets: A case study of the endangered Pacific pocket mouse

Understanding the diet of an endangered species illuminates the animal’s ecology, habitat requirements, and conservation needs. However, direct observation of diet can be difficult, particularly for small, nocturnal animals such as the Pacific pocket mouse (Heteromyidae: Perognathus longimembris pacificus). Very little is known of the dietary habits of this federally endangered rodent...
Authors
Deborah D. Iwanowicz, Amy G. Vandergast, Robert S. Cornman, Cynthia R. Adams, Joshua R. Kohn, Robert N. Fisher, Cheryl S. Brehme

Water clarity of the Colorado River—Implications for food webs and fish communities Water clarity of the Colorado River—Implications for food webs and fish communities

The closure of Glen Canyon Dam in 1963 resulted in drastic changes to water clarity, temperature, and flow of the Colorado River in Glen, Marble, and Grand Canyons. The Colorado River is now much clearer, water temperature is less variable throughout the year, and the river is much colder in the summer months. The flow—regulated by the dam—is now less variable annually, but has larger...
Authors
Nicholas Voichick, Theodore A. Kennedy, David J. Topping, Ronald E. Griffiths, Kyrie Fry

Filling the interspace—restoring arid land mosses: source populations, organic matter, and overwintering govern success Filling the interspace—restoring arid land mosses: source populations, organic matter, and overwintering govern success

Biological soil crusts contribute to ecosystem functions and occupy space that could be available to invasive annual grasses. Given disturbances in the semiarid shrub steppe communities, we embarked on a set of studies to investigate restoration potential of mosses in sagebrush steppe ecosystems. We examined establishment and growth of two moss species common to the Great Basin, USA...
Authors
Lea Condon, David A. Pyke

Evaluation of fisher (Pekania pennanti) restoration in Olympic National Park and the Olympic Recovery Area: 2015 final annual progress report Evaluation of fisher (Pekania pennanti) restoration in Olympic National Park and the Olympic Recovery Area: 2015 final annual progress report

With the translocation and release of 90 fishers (Pekania pennanti) from British Columbia to Olympic National Park during 2008–2010, the National Park Service (NPS) and Washington Department of Fish and Wildlife (WDFW) accomplished the first phase of fisher restoration in Washington State. Beginning in 2013, we initiated a new research project to determine the current status of fishers...
Authors
Patricia J. Happe, Kurt J. Jenkins, Thomas J. Kay, Kristie Pilgrim, Michael K. Schwartz, Jeffrey C. Lewis, Keith B. Aubry

Chewing lice of swan geese (Anser cygnoides): New host-parasite associations Chewing lice of swan geese (Anser cygnoides): New host-parasite associations

Chewing lice (Phthiraptera) that parasitize the globally threatened swan goose Anser cygnoides have been long recognized since the early 19th century, but those records were probably biased towards sampling of captive or domestic geese due to the small population size and limited distribution of its wild hosts. To better understand the lice species parasitizing swan geese that are...
Authors
Chang-Yong Choi, John Y. Takekawa, Diann J. Prosser, Lacy M. Smith, Craig R. Ely, Anthony D. Fox, Lei Cao, Xin Wang, Nyambayar Batbayar, Tseveenmayadag Natsagdorj, Xiangming Xiao

Persistence and diversity of directional landscape connectivity improves biomass pulsing in expanding and contracting wetlands Persistence and diversity of directional landscape connectivity improves biomass pulsing in expanding and contracting wetlands

In flood-pulsed ecosystems, hydrology and landscape structure mediate transfers of energy up the food chain by expanding and contracting in area, enabling spatial expansion and growth of fish populations during rising water levels, and subsequent concentration during the drying phase. Connectivity of flooded areas is dynamic as waters rise and fall, and is largely determined by landscape
Authors
Simeon Yurek, Donald L. DeAngelis, Joel C. Trexler, Stephen Klassen, Laurel G. Larsen

Bayesian cross-validation for model evaluation and selection, with application to the North American Breeding Bird Survey Bayesian cross-validation for model evaluation and selection, with application to the North American Breeding Bird Survey

The analysis of ecological data has changed in two important ways over the last 15 years. The development and easy availability of Bayesian computational methods has allowed and encouraged the fitting of complex hierarchical models. At the same time, there has been increasing emphasis on acknowledging and accounting for model uncertainty. Unfortunately, the ability to fit complex models...
Authors
William A. Link, John R. Sauer

Hydrologic restoration in a dynamic subtropical mangrove-to-marsh ecotone Hydrologic restoration in a dynamic subtropical mangrove-to-marsh ecotone

Extensive hydrologic modifications in coastal regions across the world have occurred to support infrastructure development, altering the function of many coastal wetlands. Wetland restoration success is dependent on the existence of hydrologic regimes that support development of appropriate soils and the growth and persistence of wetland vegetation. In Florida, United States, the...
Authors
Rebecca J. Howard, Richard H. Day, Ken W. Krauss, Andrew S. From, Larry K. Allain, Nicole Cormier

A downstream voyage with mercury A downstream voyage with mercury

Retrospective essay for the Bulletin of Environmental Contamination and Toxicology. As I look back on my paper, “Effects of Low Dietary Levels of Methyl Mercury on Mallard Reproduction,” published in 1974 in the Bulletin of Environmental Contamination and Toxicology, a thought sticks in my mind. I realize just how much my mercury research was not unlike a leaf in a stream, carried this...
Authors
Gary Heinz

Nuclear and mitochondrial DNA analyses of golden eagles (Aquila chrysaetos canadensis) from three areas in western North America; initial results and conservation implications Nuclear and mitochondrial DNA analyses of golden eagles (Aquila chrysaetos canadensis) from three areas in western North America; initial results and conservation implications

Understanding the genetics of a population is a critical component of developing conservation strategies. We used archived tissue samples from golden eagles (Aquila chrysaetos canadensis) in three geographic regions of western North America to conduct a preliminary study of the genetics of the North American subspecies, and to provide data for United States Fish and Wildlife Service...
Authors
Erica H. Craig, Jennifer R. Adams, Lisette P. Waits, Mark R. Fuller, Diana M. Whittington

Recurrent hybridization and recent origin obscure phylogenetic relationships within the ‘white-headed’ gull (Larus sp.) complex Recurrent hybridization and recent origin obscure phylogenetic relationships within the ‘white-headed’ gull (Larus sp.) complex

Species complexes that have undergone recent radiations are often characterized by extensive allele sharing due to recent ancestry and (or) introgressive hybridization. This can result in discordant evolutionary histories of genes and heterogeneous genomes, making delineating species limits difficult. Here we examine the phylogenetic relationships among a complex group of birds, the...
Authors
Sarah A. Sonsthagen, Robert E. Wilson, Terry Chesser, Jean-Marc Pons, Pierre-Andre Crochet, Amy Driscoll, Carla Dove

Is consolidation drainage an indirect mechanism for increased abundance of cattail in northern prairie wetlands? Is consolidation drainage an indirect mechanism for increased abundance of cattail in northern prairie wetlands?

In the Prairie Pothole Region of North America, disturbances to wetlands that disrupt water-level fluctuations in response to wet–dry climatic conditions have the potential to alter natural vegetative communities in favor of species that proliferate in stable environments, such as cattail (Typha spp.). We evaluated the effect of water-level dynamics during a recent fluctuation in wet–dry
Authors
Mark T. Wiltermuth, Michael J. Anteau
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