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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42700

Effects of consumption-oriented versus trophy-oriented fisheries on Muskellunge population size structure in northern Wisconsin Effects of consumption-oriented versus trophy-oriented fisheries on Muskellunge population size structure in northern Wisconsin

To determine whether a consumption-oriented fishery was compatible with a trophy-oriented fishery for Muskellunge Esox masquinongy, we modeled effects of a spearing fishery and recreational angling fishery on population size structure (i.e., numbers of fish ≥ 102, 114, and 127 cm) in northern Wisconsin. An individual-based simulation model was used to quantify the effect of harvest...
Authors
Matthew D. Faust, Michael J. Hansen

Environmental drivers of differences in microbial community structure in crude oil reservoirs across a methanogenic gradient Environmental drivers of differences in microbial community structure in crude oil reservoirs across a methanogenic gradient

Stimulating in situ microbial communities in oil reservoirs to produce natural gas is a potentially viable strategy for recovering additional fossil fuel resources following traditional recovery operations. Little is known about what geochemical parameters drive microbial population dynamics in biodegraded, methanogenic oil reservoirs. We investigated if microbial community structure was
Authors
Jenna L. Shelton, Denise M. Akob, Jennifer C. McIntosh, Noah Fierer, John R. Spear, Peter D. Warwick, John E. McCray

Sagebrush, greater sage-grouse, and the occurrence and importance of forbs Sagebrush, greater sage-grouse, and the occurrence and importance of forbs

Big sagebrush (Artemisia tridentata Nutt.) ecosystems provide habitat for sagebrush-obligate wildlife species such as the Greater Sage-Grouse (Centrocercus urophasianus). The understory of big sagebrush plant communities is composed of grasses and forbs that are important sources of cover and food for wildlife. The grass component is well described in the literature, but the composition...
Authors
Victoria E. Pennington, Daniel R. Schlaepfer, Jeffrey L. Beck, John B. Bradford, Kyle A. Palmquist, William K. Lauenroth

Application of decision science to resilience management in Jamaica Bay Application of decision science to resilience management in Jamaica Bay

This book highlights the growing interest in management interventions designed to enhance the resilience of the Jamaica Bay socio-ecological system. Effective management, whether the focus is on managing biological processes or human behavior or (most likely) both, requires decision makers to anticipate how the managed system will respond to interventions (i.e., via predictions or...
Authors
Mitchell J. Eaton, Angela K. Fuller, Fred A. Johnson, M. P. Hare, Richard C. Stedman

Direct photolysis rates and transformation pathways of the lampricides TFM and niclosamide in simulated sunlight Direct photolysis rates and transformation pathways of the lampricides TFM and niclosamide in simulated sunlight

The lampricides 3-trifluoromethyl-4-nitrophenol (TFM) and 2′,5-dichloro-4′-nitrosalicylanilide (niclosamide) are directly added to many tributaries of the Great Lakes that harbor the invasive parasitic sea lamprey. Despite their long history of use, the fate of lampricides is not well understood. This study evaluates the rate and pathway of direct photodegradation of both lampricides...
Authors
Megan B. McConville, Terrance D. Hubert, Christina K. Remucal

Metabarcoding of fecal samples to determine herbivore diets: A case study of the endangered Pacific pocket mouse Metabarcoding of fecal samples to determine herbivore diets: A case study of the endangered Pacific pocket mouse

Understanding the diet of an endangered species illuminates the animal’s ecology, habitat requirements, and conservation needs. However, direct observation of diet can be difficult, particularly for small, nocturnal animals such as the Pacific pocket mouse (Heteromyidae: Perognathus longimembris pacificus). Very little is known of the dietary habits of this federally endangered rodent...
Authors
Deborah D. Iwanowicz, Amy G. Vandergast, Robert S. Cornman, Cynthia R. Adams, Joshua R. Kohn, Robert N. Fisher, Cheryl S. Brehme

Water clarity of the Colorado River—Implications for food webs and fish communities Water clarity of the Colorado River—Implications for food webs and fish communities

The closure of Glen Canyon Dam in 1963 resulted in drastic changes to water clarity, temperature, and flow of the Colorado River in Glen, Marble, and Grand Canyons. The Colorado River is now much clearer, water temperature is less variable throughout the year, and the river is much colder in the summer months. The flow—regulated by the dam—is now less variable annually, but has larger...
Authors
Nicholas Voichick, Theodore A. Kennedy, David J. Topping, Ronald E. Griffiths, Kyrie Fry

Persistence and diversity of directional landscape connectivity improves biomass pulsing in expanding and contracting wetlands Persistence and diversity of directional landscape connectivity improves biomass pulsing in expanding and contracting wetlands

In flood-pulsed ecosystems, hydrology and landscape structure mediate transfers of energy up the food chain by expanding and contracting in area, enabling spatial expansion and growth of fish populations during rising water levels, and subsequent concentration during the drying phase. Connectivity of flooded areas is dynamic as waters rise and fall, and is largely determined by landscape
Authors
Simeon Yurek, Donald L. DeAngelis, Joel C. Trexler, Stephen Klassen, Laurel G. Larsen

Bayesian cross-validation for model evaluation and selection, with application to the North American Breeding Bird Survey Bayesian cross-validation for model evaluation and selection, with application to the North American Breeding Bird Survey

The analysis of ecological data has changed in two important ways over the last 15 years. The development and easy availability of Bayesian computational methods has allowed and encouraged the fitting of complex hierarchical models. At the same time, there has been increasing emphasis on acknowledging and accounting for model uncertainty. Unfortunately, the ability to fit complex models...
Authors
William A. Link, John R. Sauer

Hydrologic restoration in a dynamic subtropical mangrove-to-marsh ecotone Hydrologic restoration in a dynamic subtropical mangrove-to-marsh ecotone

Extensive hydrologic modifications in coastal regions across the world have occurred to support infrastructure development, altering the function of many coastal wetlands. Wetland restoration success is dependent on the existence of hydrologic regimes that support development of appropriate soils and the growth and persistence of wetland vegetation. In Florida, United States, the...
Authors
Rebecca J. Howard, Richard H. Day, Ken W. Krauss, Andrew S. From, Larry K. Allain, Nicole Cormier

A downstream voyage with mercury A downstream voyage with mercury

Retrospective essay for the Bulletin of Environmental Contamination and Toxicology. As I look back on my paper, “Effects of Low Dietary Levels of Methyl Mercury on Mallard Reproduction,” published in 1974 in the Bulletin of Environmental Contamination and Toxicology, a thought sticks in my mind. I realize just how much my mercury research was not unlike a leaf in a stream, carried this...
Authors
Gary Heinz

Nuclear and mitochondrial DNA analyses of golden eagles (Aquila chrysaetos canadensis) from three areas in western North America; initial results and conservation implications Nuclear and mitochondrial DNA analyses of golden eagles (Aquila chrysaetos canadensis) from three areas in western North America; initial results and conservation implications

Understanding the genetics of a population is a critical component of developing conservation strategies. We used archived tissue samples from golden eagles (Aquila chrysaetos canadensis) in three geographic regions of western North America to conduct a preliminary study of the genetics of the North American subspecies, and to provide data for United States Fish and Wildlife Service...
Authors
Erica H. Craig, Jennifer R. Adams, Lisette P. Waits, Mark R. Fuller, Diana M. Whittington
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