Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42707
National protocol framework for the inventory and monitoring of bees National protocol framework for the inventory and monitoring of bees
This national protocol framework is a standardized tool for the inventory and monitoring of the approximately 4,200 species of native and non-native bee species that may be found within the National Wildlife Refuge System (NWRS) administered by the U.S. Fish and Wildlife Service (USFWS). However, this protocol framework may also be used by other organizations and individuals to monitor...
Authors
Sam Droege, Joseph D. Engler, Elizabeth A. Sellers, Lee O’Brien
Genetic variation at the MHC DRB1 locus is similar across Gunnison's prairie dog (Cynomys gunnisoni) colonies regardless of plague history Genetic variation at the MHC DRB1 locus is similar across Gunnison's prairie dog (Cynomys gunnisoni) colonies regardless of plague history
Yersinia pestis was introduced to North America around 1900 and leads to nearly 100% mortality in prairie dog (Cynomys spp.) colonies during epizootic events, which suggests this pathogen may exert a strong selective force. We characterized genetic diversity at an MHC class II locus (DRB1) in Gunnison's prairie dog (C. gunnisoni) and quantified population genetic structure at the...
Authors
Kacy R. Cobble, Katy J. Califf, Nathan E. Stone, Megan M. Shuey, Dawn Birdsell, Rebecca E. Colman, James M. Schupp, Maliha Aziz, Roger Van Andel, Tonie E. Rocke, David M. Wagner, Joseph D. Busch
Life history characteristics and vital rates of Yellowstone Cutthroat Trout in two headwater basins Life history characteristics and vital rates of Yellowstone Cutthroat Trout in two headwater basins
The Yellowstone Cutthroat Trout Oncorhynchus clarkii bouvieri is native to the Rocky Mountains and has declined in abundance and distribution as a result of habitat degradation and introduced salmonid species. Many of its remaining strongholds are in headwater basins with minimal human disturbances. Understanding the life histories, vital rates, and behaviors of Yellowstone Cutthroat...
Authors
Patrick Uthe, Robert K. Al-Chokhachy, Alexander V. Zale, Bradley B. Shepard, Thomas E. McMahon, Tracy Stephens
First steps for mitigating bycatch of Pink-footed Shearwaters Ardenna creatopus: Identifying overlap of foraging areas and fisheries in Chile First steps for mitigating bycatch of Pink-footed Shearwaters Ardenna creatopus: Identifying overlap of foraging areas and fisheries in Chile
The Pink-footed Shearwater, Ardenna creatopus, is listed as in danger of extinction by Chile and under Annex 1 of ACAP, with an estimated global population of approximately 56,000 individuals. Incidental bycatch of this species in fisheries is thought to be an important cause in population decline (i.e. annual estimated mortality of >1000 adults). This species is an endemic breeder in...
Authors
Ryan Carle, Jonathan J. Felis, Verónica López, Josh Adams, Peter Hodum, Jessie Beck, Valentina Colodro, Rodrigo Vega, Andres Gonzalez
Regulation of the hunting season as a tool for adaptive harvest management — First results for pink-footed geese Anser brachyrhynchus Regulation of the hunting season as a tool for adaptive harvest management — First results for pink-footed geese Anser brachyrhynchus
Adjustment of hunting season length is often used to regulate harvest of waterbirds but the effects are disputed. We describe the first results of season length extension on the harvest of the pink-footed goose, which has been selected as the first test case of adaptive harvest management of waterbirds in Europe. In Denmark, the season (previously 1 September to 31 December) was extended...
Authors
Jesper Madsen, Kevin K. Clausen, Thomas K. Christensen, Fred A. Johnson
SNP discovery in candidate adaptive genes using exon capture in a free-ranging alpine ungulate SNP discovery in candidate adaptive genes using exon capture in a free-ranging alpine ungulate
Identification of genes underlying genomic signatures of natural selection is key to understanding adaptation to local conditions. We used targeted resequencing to identify SNP markers in 5321 candidate adaptive genes associated with known immunological, metabolic and growth functions in ovids and other ungulates. We selectively targeted 8161 exons in protein-coding and nearby 5′ and 3′
Authors
Gretchen H. Roffler, Stephen J. Amish, Seth Smith, Ted F. Cosart, Marty Kardos, Michael K. Schwartz, Gordon Luikart
Changing disturbance regimes, ecological memory, and forest resilience Changing disturbance regimes, ecological memory, and forest resilience
Ecological memory is central to how ecosystems respond to disturbance and is maintained by two types of legacies – information and material. Species life-history traits represent an adaptive response to disturbance and are an information legacy; in contrast, the abiotic and biotic structures (such as seeds or nutrients) produced by single disturbance events are material legacies...
Authors
Jill F. Johnstone, Craig D. Allen, Jerry F. Franklin, Lee E. Frelich, Brian J. Harvey, Philip E. Higuera, Michelle C. Mack, Ross K. Meentemeyer, Margaret R. Metz, George LW Perry, Tania Schoennagel, Monica G. Turner
Hydrology of flooded and wetland forests Hydrology of flooded and wetland forests
In this chapter we will examine the hydrology of forested areas that are subject to soil saturation by rain, groundwater, or surface flooding. They include mangroves and other tidal forests, the forested portions of peatlands, and tree dominated wetlands defined by the Ramsar Convention (Mathews 1993). They also include estuarine tidal forests, palustrine forested wetlands, and the...
Authors
T. M. Williams, Ken W. Krauss, T. Okruszko
Low survival rates of Swan Geese (Anser cygnoides) estimated from neck-collar resighting and telemetry Low survival rates of Swan Geese (Anser cygnoides) estimated from neck-collar resighting and telemetry
Waterbird survival rates are a key component of demographic modeling used for effective conservation of long-lived threatened species. The Swan Goose (Anser cygnoides) is globally threatened and the most vulnerable goose species endemic to East Asia due to its small and rapidly declining population. To address a current knowledge gap in demographic parameters of the Swan Goose, available...
Authors
Chang-Yong Choi, Ki-Sup Lee, Nikolay D. Poyarkov, Jin-Young Park, Hansoo Lee, John Y. Takekawa, Lacy M. Smith, Craig R. Ely, Xin Wang, Lei Cao, Anthony D. Fox, Oleg Goroshko, Nyambayar Batbayar, Diann J. Prosser, Xiangming Xiao
Differences found in the macroinvertebrate community composition in the presence or absence of the invasive alien crayfish, Orconectes hylas Differences found in the macroinvertebrate community composition in the presence or absence of the invasive alien crayfish, Orconectes hylas
Introductions of alien species into aquatic ecosystems have been well documented, including invasions of crayfish species; however, little is known about the effects of these introductions on macroinvertebrate communities. The woodland crayfish (Orconectes hylas (Faxon)) has been introduced into the St. Francis River watershed in southeast Missouri and has displaced populations of native...
Authors
Brandye T. Freeland-Riggert, Stefan H. Cairns, Barry C. Poulton, Chris M. Riggert
Safety of the molluscicide Zequanox (R) to nontarget macroinvertebrates Gammarus lacustris (Amphipoda: Gammaridae) and Hexagenia spp. (Ephemeroptera: Ephemeridae) Safety of the molluscicide Zequanox (R) to nontarget macroinvertebrates Gammarus lacustris (Amphipoda: Gammaridae) and Hexagenia spp. (Ephemeroptera: Ephemeridae)
Zequanox® is a commercial formulation of the killed bacterium, Pseudomonas fluorescens (strain CL145A), that was developed to control dreissenid mussels. In 2014, Zequanox became the second product registered by the United States Environmental Protection Agency (USEPA) for use in open water environments as a molluscicide. Previous nontarget studies demonstrated the safety and selectivity...
Authors
Diane L. Waller, James A. Luoma, Richard A. Erickson
The reintroduction landscape: Finding success at the intersection of ecological, social, and institutional dimensions The reintroduction landscape: Finding success at the intersection of ecological, social, and institutional dimensions
No abstract available.
Authors
Jason B. Dunham, Rollie White, Chris S Allen, Bruce G. Marcot, Dan Shively