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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42702

Balanced sediment fluxes in southern California’s Mediterranean-climate zone salt marshes Balanced sediment fluxes in southern California’s Mediterranean-climate zone salt marshes

Salt marsh elevation and geomorphic stability depends on mineral sedimentation. Many Mediterranean-climate salt marshes along southern California, USA coast import sediment during El Niño storm events, but sediment fluxes and mechanisms during dry weather are potentially important for marsh stability. We calculated tidal creek sediment fluxes within a highly modified, sediment-starved, 1...
Authors
Jordan A. Rosencranz, Neil K. Ganju, Richard F. Ambrose, Sandra M. Brosnahan, Patrick J. Dickhudt, Glenn R. Guntenspergen, Glen M. MacDonald, John Y. Takekawa, Karen M. Thorne

Differential influences of local subpopulations on regional diversity and differentiation for greater sage-grouse (Centrocercus urophasianus) Differential influences of local subpopulations on regional diversity and differentiation for greater sage-grouse (Centrocercus urophasianus)

The distribution of spatial genetic variation across a region can shape evolutionary dynamics and impact population persistence. Local population dynamics and among-population dispersal rates are strong drivers of this spatial genetic variation, yet for many species we lack a clear understanding of how these population processes interact in space to shape within-species genetic variation...
Authors
Jeffery R. Row, Sara J. Oyler-McCance, Brad C. Fedy

Evidence for wild waterfowl origin of H7N3 influenza A virus detected in captive-reared New Jersey pheasants Evidence for wild waterfowl origin of H7N3 influenza A virus detected in captive-reared New Jersey pheasants

In August 2014, a low-pathogenic H7N3 influenza A virus was isolated from pheasants at a New Jersey gamebird farm and hunting preserve. In this study, we use phylogenetic analyses and calculations of genetic similarity to gain inference into the genetic ancestry of this virus and to identify potential routes of transmission. Results of maximum-likelihood (ML) and maximum-clade...
Authors
Andrew M. Ramey, Mia Kim Torchetti, Rebecca L. Poulson, Deborah L. Carter, Andrew B. Reeves, Paul Link, Patrick Walther, Camille Lebarbenchon, David E. Stallknecht

Resource management and operations in central North Dakota: Climate change scenario planning workshop summary November 12-13, 2015, Bismarck, ND Resource management and operations in central North Dakota: Climate change scenario planning workshop summary November 12-13, 2015, Bismarck, ND

The Scaling Climate Change Adaptation in the Northern Great Plains through Regional Climate Summaries and Local Qualitative-Quantitative Scenario Planning Workshops project synthesizes climate data into 3-5 distinct but plausible climate summaries for the northern Great Plains region; crafts quantitative summaries of these climate futures for two focal areas; and applies these local...
Authors
Nicholas A. Fisichelli, Gregor Schuurman, Amy J. Symstad, Andrea Ray, Jonathan M. Friedman, Brian Miller, Erika Rowland

Arctic sea ice a major determinant in Mandt's black guillemot movement and distribution during non-breeding season Arctic sea ice a major determinant in Mandt's black guillemot movement and distribution during non-breeding season

Mandt's black guillemot (Cepphus grylle mandtii) is one of the few seabirds associated in all seasons with Arctic sea ice, a habitat that is changing rapidly. Recent decreases in summer ice have reduced breeding success and colony size of this species in Arctic Alaska. Little is known about the species' movements and distribution during the nine month non-breeding period (September–May)...
Authors
G.J. Divoky, David C. Douglas, I. J. Stenhouse

The effects of anthropogenic land cover change on pollen-vegetation relationships in the American Midwest The effects of anthropogenic land cover change on pollen-vegetation relationships in the American Midwest

Fossil pollen assemblages provide information about vegetation dynamics at time scales ranging from centuries to millennia. Pollen-vegetation models and process-based models of dispersal typically assume stable relationships between source vegetation and corresponding pollen in surface sediments, as well as stable parameterizations of dispersal and productivity. These assumptions...
Authors
Ellen Ruth Kujawa, Simon Goring, Andria Dawson, Randy Calcote, Eric Grimm, Sara C. Hotchkiss, Stephen T. Jackson, Elizabeth A. Lynch, Jason S. McLachlan, Jeannine-Marie St-Jacques, Charles Umbanhowar, John W. Williams

Terrestrial vegetation monitoring protocol for the Mediterranean Coast Network—Cabrillo National Monument, Channel Islands National Park, and Santa Monica Mountains National Recreation Area: Standard Operating Procedures, Version 1.0 Terrestrial vegetation monitoring protocol for the Mediterranean Coast Network—Cabrillo National Monument, Channel Islands National Park, and Santa Monica Mountains National Recreation Area: Standard Operating Procedures, Version 1.0

These Standard Operating Procedures are one part of a two-part protocol for monitoring terrestrial vegetation in the Mediterranean Coast Network. The second part of the protocol is the narrative: Tiszler, J., D. Rodriguez, K. Lombardo, T. Sagar, L. Aguilar, L. Lee, T. Handley, K. McEachern, L. Starcevich, M. Witter, T. Philippi, and S. Ostermann-Kelm. 2016. Terrestrial vegetation...
Authors
John Tiszler, Dirk Rodriguez, Keith Lombardo, Tarja Sagar, Luis Aguilar, Lena Le, Timothy Handley, Kathryn McEachern, Leigh Ann Harrod Starcevich, Marti Witter, Tom Philippi, Stacey Ostermann-Kelm

Graptemys pearlensis Ennen, Lovich, Kreiser, Selman, and Qualls 2010 – Pearl River Map Turtle Graptemys pearlensis Ennen, Lovich, Kreiser, Selman, and Qualls 2010 – Pearl River Map Turtle

The Pearl River Map Turtle, Graptemys pearlensis (Family Emydidae), is a moderate-sized aquatic turtle endemic to the Pearl River drainage of Louisiana and Mississippi. This taxon has long been a cryptic species, as it was considered part of G. pulchra before 1992 and part of G. gibbonsi until 2010. Graptemys pearlensis exhibits sexual dimorphism, with adult females being considerably...
Authors
Joshua R. Ennen, Jeffrey E. Lovich, Robert L. Jones

Mapping changing distributions of dominant species in oil-contaminated salt marshes of Louisiana using imaging spectroscopy Mapping changing distributions of dominant species in oil-contaminated salt marshes of Louisiana using imaging spectroscopy

The April 2010 Deepwater Horizon (DWH) oil spill was the largest coastal spill in U.S. history. Monitoring subsequent change in marsh plant community distributions is critical to assess ecosystem impacts and to establish future coastal management priorities. Strategically deployed airborne imaging spectrometers, like the Airborne Visible/Infrared Imaging Spectrometer (AVIRIS), offer the...
Authors
Michael Beland, Dar A. Roberts, Seth H. Peterson, Trent W. Biggs, Raymond F. Kokaly, Sarai Piazza, Keely L. Roth, Shruti Khanna, Susan L. Ustin

H9N2 influenza A virus isolated from a Greater White-fronted wild goose (Anser albifrons) in Alaska has a mutation in the PB2 gene, which is associated with pathogenicity in human pandemic 2009 H1N1 H9N2 influenza A virus isolated from a Greater White-fronted wild goose (Anser albifrons) in Alaska has a mutation in the PB2 gene, which is associated with pathogenicity in human pandemic 2009 H1N1

We report here the genomic sequence of an H9N2 influenza A virus [A/greater white-fronted goose/Alaska/81081/2008 (H9N2)]. This virus shares ≥99.8% identity with a previously reported virus. Both strains contain a G590S mutation in the polymerase basic 2 (PB2) gene, which is a pathogenicity marker in the pandemic 2009 H1N1 virus when combined with R591.
Authors
Andrew B. Reeves, S. Ip

A strategy for recovering continuous behavioral telemetry data from Pacific walruses A strategy for recovering continuous behavioral telemetry data from Pacific walruses

Tracking animal behavior and movement with telemetry sensors can offer substantial insights required for conservation. Yet, the value of data collected by animal-borne telemetry systems is limited by bandwidth constraints. To understand the response of Pacific walruses (Odobenus rosmarus divergens) to rapid changes in sea ice availability, we required continuous geospatial chronologies...
Authors
Anthony S. Fischbach, Chadwick V. Jay

Resource management and operations in southwest South Dakota: Climate change scenario planning workshop summary January 20-21, 2016, Rapid City, SD Resource management and operations in southwest South Dakota: Climate change scenario planning workshop summary January 20-21, 2016, Rapid City, SD

The Scaling Climate Change Adaptation in the Northern Great Plains through Regional Climate Summaries and Local Qualitative-Quantitative Scenario Planning Workshops project synthesizes climate data into 3-5 distinct but plausible climate summaries for the northern Great Plains region; crafts quantitative summaries of these climate futures for two focal areas; and applies these local...
Authors
Nicholas A. Fisichelli, Gregor W. Schuurman, Amy J. Symstad, Andrea Ray, Brian Miller, Molly Cross, Erika Rowland
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