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Browse more than 65,000 articles authored by our scientists over the past 100+ year history of the USGS and refine search by topic, location, year, and advanced search.

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Bedrock gorge incision via anthropogenic meander cutoff Bedrock gorge incision via anthropogenic meander cutoff

Bedrock river-gorge incision represents a fundamental landscape-shaping process, but a dearth of observational data at >10 yr timescales impedes understanding of gorge formation. I quantify 102 yr rates and processes of gorge incision using historical records, field observations, and topographic and image analysis of a human-caused bedrock meander cutoff along the North Fork Fortymile...
Authors
Adrian Bender

Comparative genomics analyses support the reclassification of Bisgaard taxon 40 as Mergibacter gen. nov., with Mergibacter septicus sp. nov. as type species: Novel insights into the phylogeny and virulence factors of a Pasteurellaceae family member associ Comparative genomics analyses support the reclassification of Bisgaard taxon 40 as Mergibacter gen. nov., with Mergibacter septicus sp. nov. as type species: Novel insights into the phylogeny and virulence factors of a Pasteurellaceae family member associ

The Pasteurellaceae family has been associated with fatal diseases in numerous avian species. Several new taxa within this family, including Bisgaard taxon 40, have been recently described in wild birds, but their genomic characteristics and pathogenicity are not well understood. We isolated Bisgaard taxon 40 from four species of seabirds, including one sampled during a mass, multi...
Authors
Eliana De Luca, Sonsiray Alvarez-Narvaez, Grazieli Maboni, Rodrigo P Baptista, Nicole M Nemeth, Kevin D. Niedringhaus, Jason T. Ladner, Jeffrey M. Lorch, Galina Koroleva, Sean Lovett, Gustavo F Palacios, Susan Sanchez

Tissue and salinity specific Na+/Cl− cotransporter (NCC) orthologues involved in the adaptive osmoregulation of sea lamprey (Petromyzon marinus) Tissue and salinity specific Na+/Cl− cotransporter (NCC) orthologues involved in the adaptive osmoregulation of sea lamprey (Petromyzon marinus)

Two orthologues of the gene encoding the Na+-Cl− cotransporter (NCC), termed ncca and nccb, were found in the sea lamprey genome. No gene encoding the Na+-K+-2Cl− cotransporter 2 (nkcc2) was identified. In a phylogenetic comparison among other vertebrate NCC and NKCC sequences, the sea lamprey NCCs occupied basal positions within the NCC clades. In freshwater, ncca mRNA was found only in...
Authors
Andre Barany-Ruiz, Ciaran S Shaughnessy, Ryan M. Pelis, Juan Fuentes, Juan M Mancera, Stephen D. McCormick

Foreword: Control and conservation of lampreys beyond 2020 - Proceedings from the 3rd Sea Lamprey International Symposium (SLIS III) Foreword: Control and conservation of lampreys beyond 2020 - Proceedings from the 3rd Sea Lamprey International Symposium (SLIS III)

Introduction to the special issue on the 3rd Sea Lamprey International Symposium. The compiled papers in this special issue consist of a combination of syntheses requested in advance of the symposium and perspectives that emerged from the symposium break-out discussions. These written contributions address the symposium goals of updating our understanding of sea lamprey control and...
Authors
Robert L. McLaughlin, Jean V. Adams, Pedro R. Almeida, Jessica Barber, Dale P. Burkett, Margaret F. Docker, Nicholas S. Johnson, Mary L. Moser, Andrew M. Muir, Michael J. Siefkes, Todd B. Steeves, Michael P. Wilkie

Co-occurring lotic crayfishes exhibit variable long-term responses to extreme-flow events and temperature Co-occurring lotic crayfishes exhibit variable long-term responses to extreme-flow events and temperature

Crayfish serve critical roles in aquatic ecosystems as engineers, omnivores, and prey. It is unclear how increasingly frequent extreme-flow events and warming air temperatures will affect crayfish populations, partly because there are few long-term crayfish monitoring datasets. Using a unique 10-y dataset, we asked 1) whether recruitment of crayfishes in summer responded to extreme-flow...
Authors
Corey Garland Dunn, Michael J. Moore, Nicholas A. Sievert, Craig P. Paukert, Robert J. DiStefano

Projecting climate dependent coastal flood risk with a hybrid statistical dynamical model Projecting climate dependent coastal flood risk with a hybrid statistical dynamical model

Numerical models for tides, storm surge, and wave runup have demonstrated ability to accurately define spatially varying flood surfaces. However these models are typically too computationally expensive to dynamically simulate the full parameter space of future oceanographic, atmospheric, and hydrologic conditions that will constructively compound in the nearshore to cause both extreme...
Authors
D. L. Anderson, P. Ruggiero, F. J. Mendez, Patrick L. Barnard, Li H. Erikson, Andrea C. O'Neill, M. Merrifield, A. Rueda, L. Cagigal, J. M. Marra

Classifying crop types using two generations of hyperspectral sensors (Hyperion and DESIS) with machine learning on the cloud Classifying crop types using two generations of hyperspectral sensors (Hyperion and DESIS) with machine learning on the cloud

Advances in spaceborne hyperspectral (HS) remote sensing, cloud-computing, and machine learning can help measure, model, map and monitor agricultural crops to address global food and water security issues, such as by providing accurate estimates of crop area and yield to model agricultural productivity. Leveraging these advances, we used the Earth Observing-1 (EO-1) Hyperion historical...
Authors
Itiya P. Aneece, Prasad Thenkabail

The triple argon isotope composition of groundwater on ten-thousand-year timescales The triple argon isotope composition of groundwater on ten-thousand-year timescales

Understanding the age and movement of groundwater is important for predicting the vulnerability of wells to contamination, constraining flow models that inform sustainable groundwater management, and interpreting geochemical signals that reflect past climate. Due to both the ubiquity of groundwater with order ten-thousand-year residence times and its importance for climate reconstruction...
Authors
Alan Seltzer, John A. Krantz, Jessica Ng, Wesley R. Danskin, David Bekaert, Peter H. Barry, David L. Kimbrough, Justin T. Kulongoski, Jeffrey P. Severinghaus

Correspondence analysis for mineral commodity research: An example workflow for mineralized calderas, southwest United States Correspondence analysis for mineral commodity research: An example workflow for mineralized calderas, southwest United States

Historical mine and mineral deposit datasets are routinely used to inform quantitative mineral assessment models, but they also can contain a wealth of supplementary qualitative information that is generally underutilized. We present a workflow that uses correspondence analysis, an exploratory tool commonly applied to multivariate abundance data, to better utilize qualitative data in...
Authors
Joshua Mark Rosera, Drew S Coleman

Clutch may predict growth of hatchling Burmese pythons better than food availability or sex Clutch may predict growth of hatchling Burmese pythons better than food availability or sex

Identifying which environmental and genetic factors affect growth pattern phenotypes can help biologists predict how organisms distribute finite energy resources in response to varying environmental conditions and physiological states. This information may be useful for monitoring and managing populations of cryptic, endangered, and invasive species. Consequently, we assessed the effects...
Authors
Jillian Maureen Josimovich, Bryan G. Falk, Alejandro Grajal-Puche, Emma B. Hanslowe, Ian A. Bartoszek, Robert Reed, Andrea Faye Currylow

Identifying factors that affect mountain lake sensitivity to atmospheric nitrogen deposition across multiple scales Identifying factors that affect mountain lake sensitivity to atmospheric nitrogen deposition across multiple scales

Increased nitrogen (N) deposition rates over the past century have affected both North American and European mountain lake ecosystems. Ecological sensitivity of mountain lakes to N deposition varies, however, because chemical and biological responses are modulated by local watershed and lake properties. We evaluated predictors of mountain lake sensitivity to atmospheric N deposition...
Authors
Benjamin Burpee, Jasmine Saros, Leora Nanus, Jill S. Baron, Janice Brahney, Kyle Christianson, Taylor Gantz, Andi Heard, Beth Hundey, Karin Koinig, Jiri Kopacek, Katrina Moser, Koren Nydick, Isabella A. Oleksy, Steven Sadro, Ruben Sommaruga, Rolf Vinebrooke, Jason Williams
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