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Publications

Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

Filter Total Items: 175547

Best practices for genetic and genomic data archiving Best practices for genetic and genomic data archiving

Genetic and genomic data are collected for a vast array of scientific and applied purposes. Despite mandates for public archiving, data are typically used only by the generating authors. The reuse of genetic and genomic datasets remains uncommon because it is difficult, if not impossible, due to non-standard archiving practices and lack of contextual metadata. But as the new field of...
Authors
Deborah M. Leigh, Amy G. Vandergast, Margaret Hunter, Eric D. Crandall, W. Chris Funk, Colin J Garroway, Sean M. Hoban, Sara J. Oyler-McCance, Christian Rellstab, Gernot Segelbacher, Chloe Schmidt, Ella Vazquez-Dominguez, Ivan Paz-Vinas

Structural heterogeneity predicts ecological resistance and resilience to wildfire in arid shrublands Structural heterogeneity predicts ecological resistance and resilience to wildfire in arid shrublands

Context Dynamic feedbacks between physical structure and ecological function drive ecosystem productivity, resilience, and biodiversity maintenance. Detailed maps of canopy structure enable comprehensive evaluations of structure–function relationships. However, these relationships are scale-dependent, and identifying relevant spatial scales to link structure to function remains...
Authors
Andrii Zaiats, Megan E Cattau, David S. Pilliod, Rongsong Liu, Patricia Kaye T. Dumandan, Ahmad Hojatimalekshah, Donna M. Delparte, Trevor Caughlin

Reframing wildlife disease management problems with decision analysis Reframing wildlife disease management problems with decision analysis

Contemporary wildlife disease management is complex because managers need to respond to a wide range of stakeholders, multiple uncertainties, and difficult trade-offs that characterize the interconnected challenges of today. Despite general acknowledgment of these complexities, managing wildlife disease tends to be framed as a scientific problem, in which the major challenge is lack of...
Authors
Margaret McEachran, Johanna A. Harvey, Riley Olivia Mummah, Molly Bletz, Claire S. Teitelbaum, Elias Rosenblatt, F. Javiera Rudolph, Fernando Arce, Shanglai Yin, Diann Prosser, Brittany A. Mosher, Jennifer M. Mullinax, Graziella Vittoria DiRenzo, Jannelle Couret, Michael C. Runge, Evan H. Campbell Grant, Jonathan D. Cook

Testing megathrust rupture models using tsunami deposits Testing megathrust rupture models using tsunami deposits

The 26 January 1700 CE Cascadia subduction zone earthquake ruptured much of the plate boundary and generated a tsunami that deposited sand in coastal marshes from northern California to Vancouver Island. Although the depositional record of tsunami inundation is extensive in some of these marshes, few sites have been investigated in enough detail to map the inland extent of sand...
Authors
SeanPaul La Selle, Alan R. Nelson, Robert C. Witter, Bruce E. Jaffe, Guy Gelfenbaum, Jason Scott Padgett

Development of a hydrogeologic visualization model for western Sarpy County, Nebraska Development of a hydrogeologic visualization model for western Sarpy County, Nebraska

Population in western Sarpy County, Nebraska, has steadily increased over the last several decades and has led to increased groundwater use for domestic purposes. To meet the increase in demand, the Papio-Missouri River Natural Resources District is seeking to use all available sources of groundwater in western Sarpy County. Additionally, elevated groundwater nitrate plus nitrite as...
Authors
Nathaniel J. Schaepe, Mikaela L. Cherry, Amanda T. Flynn, Christopher M. Hobza

Environmental DNA Environmental DNA

The widespread adoption of environmental DNA (eDNA) detection tools for biodiversity monitoring has led to the need for universal data standards to inform principled eDNA data applications. Improvements in understanding the meaning and possible uncertainty of eDNA data can minimize erroneous conclusions, increase confidence in eDNA data, and maximize conservation outcomes. -Environmental...
Authors
Margaret Hunter, Kristian Meissner, Catherine Abbott, Florien Leese, Gernot Segelbacher
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