Software

This project contains 4 R Markdown scripts and requires a valid Movebank login is to access the data needed for these scripts. The purpose of this script is to import crow location data from movebank and group it by individual animal and season, run estimators of home range, and conducted integrated step selection function analysis.

hydroloom is a collection of functions to work with hydrologic geospatial fabrics. hydroloom is designed to provide general hydrologic network functionality for any hydrographic or hydrologic data. The package is intended for developers of workflows and other packages that require low level network and network data manipulation utilities. v1.2 adds downstream accumulation functionality...

This doi is for the supporting code for the following manuscript "Constraining sources of mid-Pleistocene to present explosive volcanism in the Gulf of Alaska using machine learning and compositional data analysis" by Jordan Lubbers, Matthew Loewen, and Kristi Wallace — in review G cubed

ipensive is a tool for processing infrasound array data. It was developed for volcano monitoring for operational use at the Alaska Volcano Observatory and has been slightly generalized for broader use. The code processes infrasound and hydroacoustic array data in 10-minute increments, generating images and a webpage for displaying/navigating those images. Much of the package is a wrapper...

This software estimates the current and projected distribution of Arizona Toad (Anaxyrus microscaphus) based on environmental conditions and perceived threats. It fits an integrated species distribution model to quantify relationships between covariates and relative abundance of Arizona Toad using species data from a variety of sources.

This document describes the peer-review and reconciliation process for version 1.0.0 of the kinematic-wave-model software package. The repository containing the referenced review items is located at: https://code.usgs.gov/ghsc/lhp/reference/kflow

This code can be used to rapidly create an annotated bibliography that will help users navigate and synthesize a large body of literature. Users can input a set of PDF or DOCX files that they have identified as relevant to their question as well as lists of relevant search terms. This code will convert the input documents into TXT files, trim the files to exclude extraneous text such as...

LANDCURATE is an interactive Shiny-based geospatial application designed to support adaptive habitat management on Alabama’s Wildlife Management Areas (WMAs). The application enables users to choose or upload a study area shapefile, and generate spatially explicit land cover classifications using a hybrid modeling framework. The classification approach integrates a Random Forest (RF)...

This guide walks users through how to search the Bulk Metadata Service and compare their product lists with those available on the service, helping them ensure their data stays up to date with the latest Landsat reprocessing events.

lasertramdb (laser time resolved analysis module dashboard) is a tool for processing laser ablation icp-ms data from raw counts per second into chemical concentrations. Built using PyQT it is a graphical user interface that gives the user significant control over which portion of the signal is used in calculating final concentrations, ultimately allowing them to be more accurate. All...

Code repository for a low coverage Whole Genome Sequencing analysis on fishes of the genus Coregonus

This repository contains code and data used to analyze the influence of initial condition uncertainty on model simulations of ecosystem carbon dynamics in the U.S. state of California.