eDNA

New terrestrial environmental DNA (eDNA) sampling techniques are sensitive tools for early detection of the highly invasive brown treesnakes (BTS). In a new collaborative research effort involving four USGS science centers, scientists have initiated the development of an innovative point-of-use (POU) assay for BTS. POU assays are tests that can be run in the field with minimal equipment and no...

Since Public Law 109-148, USGS has partnered with state and federal agencies to conduct science to support the national response to highly pathogenic avian influenza (HPAI). In 2014, the first reports of HPAI in US wild birds came from USGS cause-of-death investigations confirmed by the USDA.

Siren: the National Early Detection and Rapid Response (EDRR) Information System is an online resource for invasive species information sharing and collaboration that serves as the information hub of the National EDRR Framework.

European green crabs are one of the most widespread marine invasive species on the planet. Where they are abundant, green crabs compete with other crabs and disturb sediment which can lead to loss of eelgrass and associated habitat essential for commercial, cultural, and ecologically important fish and invertebrate species. Green crab also are a major predator of clams, mussels, and oysters.

The coronavirus pandemic, Chronic Wasting Disease (CWD) in white-tailed deer, and white-nose syndrome in bats have spawned great interest in diseases of native fish and wildlife. Many aspects of widely known diseases of wild (as opposed to domestic) animal populations are poorly understood, including their ecology, incidence, distribution, and methods for reducing effects of disease on culturally...

The USGS has developed the Rapid environmental (e)DNA Assessment and Deployment Initiative & Network (READI-Net) to accelerate the implementation of environmental DNA (eDNA) analysis as a best practice for the early detection of aquatic biological threats. READI-Net provides tools and a strategy to collect and deliver early detection data for natural resource managers and public health protection...

The environmental DNA (eDNA) samples collected, processed, and sequenced by the Upper Midwest Environmental Sciences Center (UMESC) and partner agencies are being archived in a cloud-based database application. Consolidating eDNA data will significantly improve researchers and managers ability to visualize, analyze, and integrate sequence data as a monitoring and early detection system for...

Remote locations, rugged topography, extreme weather conditions, high numbers of threatened and endangered taxa, and widespread degradation of native ecosystems by invasive species makes routine monitoring to determine status and trends of ecosystems and native and invasive taxa difficult and expensive in the Hawaiian Islands. There is a need to supplement existing monitoring protocols with more...

Current tools for detection of Burmese pythons in South Florida have resulted in low detection rates. Environmental DNA - eDNA - has shown to be effective at detecting these invasive snakes, and can help to determine range limits for the species, information that is critical for management and control efforts.