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Publications

Read publications and other informational products to learn more about USGS science occurring in the Mississippi Basin.

Filter Total Items: 5583

From subsidies to stressors: Shifting ecological baselines alter biological responses to nutrients in highly modified agricultural streams From subsidies to stressors: Shifting ecological baselines alter biological responses to nutrients in highly modified agricultural streams

Subsidy–stress gradients offer a useful framework for understanding ecological responses to perturbation and may help inform ecological metrics in highly modified systems. Historic, region-wide shifts from bottomland hardwood forest to row crop agriculture can cause positively skewed impact gradients in alluvial plain ecoregions, resulting in tolerant organisms that typically exhibit a...
Authors
Stephen Edward Devilbiss, Jason M. Taylor, Matthew B. Hicks

Forecasting water levels using the ConvLSTM algorithm in the Everglades, USA Forecasting water levels using the ConvLSTM algorithm in the Everglades, USA

Forecasting water levels in complex ecosystems like wetlands can support effective water resource management, ecological conservation, and understanding surface and groundwater hydrology. Predictive models can be used to simulate the complex interactions among natural processes, hydrometeorological factors, and human activities. The Greater Everglades in the USA is a well-known example...
Authors
Raidan Bassah, Gerald A. Corzo Perez, Biswa Bhattacharya, Saira M. Haider, Eric D. Swain, Nicholas Aumen

Ecosystem drivers of freshwater mercury bioaccumulation are context-dependent: Insights from continental-scale modeling Ecosystem drivers of freshwater mercury bioaccumulation are context-dependent: Insights from continental-scale modeling

Significant variation in mercury (Hg) bioaccumulation is observed across the diversity of freshwater ecosystems in North America. While there is support for the major drivers of Hg bioaccumulation, the relative influence of different external factors can vary widely among waterbodies, which makes predicting Hg risk across large spatial scales particularly challenging. We modeled Hg...
Authors
Christopher James Kotalik, James Willacker, Jeff S. Wesner, Branden L. Johnson, Colleen M. Flanagan Pritz, Sarah J. Nelson, David M. Walters, Collin A. Eagles-Smith

Metal-rich lacustrine sediments from legacy mining perpetuate copper exposure to aquatic-riparian food webs Metal-rich lacustrine sediments from legacy mining perpetuate copper exposure to aquatic-riparian food webs

Historic copper mining left a legacy of metal-rich tailings resulting in ecological impacts along and within Torch Lake, an area of concern in the Keweenaw Peninsula, Michigan, USA. Given the toxicity of copper to invertebrates, this study assessed the influence of this legacy on present day nearshore aquatic and terrestrial ecosystems. We measured the metal (Co, Cu, Ni, Zn, Cd) and...
Authors
Brittany G. Perrotta, Karen A. Kidd, Kate M. Campbell, Marie Noele Croteau, Tyler Kane, Amy M. Marcarelli, R. Blaine McCleskey, Gordon Paterson, Craig A. Stricker, David Walters

Evaluation of the sensitivity of a federally endangered freshwater mussel (Venustaconcha trabalis) to selected chemicals Evaluation of the sensitivity of a federally endangered freshwater mussel (Venustaconcha trabalis) to selected chemicals

Protection of critically endangered species requires identification of factors limiting their survival and growth. Previous studies have demonstrated that unionid mussels are sensitive to some chemicals and the sensitivity was similar among different taxonomic families and tribes of mussels. However, common species of mussels were generally used in these previous studies; little is known...
Authors
Ning Wang, Chris D. Ivey, Danielle M. Cleveland, James L. Kunz, Rebecca Schapansky, Timothy W. Lane, M. Christopher Barnhart

Automating physics-based models to estimate thermoelectric-power water use Automating physics-based models to estimate thermoelectric-power water use

Thermoelectric (TE) power plants withdraw more water than any other sector of water use in the United States and consume water at rates that can be significant especially in water-stressed regions. Historical TE water-use data have been inconsistent, incomplete, or discrepant, resulting in an increased research focus on improving the accuracy and availability of TE water-use data using...
Authors
Melissa A. Harris, Timothy H. Diehl, Lillian E. Gorman Sanisaca, Amy E. Galanter, Melissa A. Lombard, Kenneth D. Skinner, Catherine A. Chamberlin, Brendan A. McCarthy, Richard G. Niswonger, Jana S. Stewart, Kristen J. Valseth

Exposure to the Polychlorinated biphenyl mixture Aroclor 1254 elicits neurological and cardiac developmental effects in early life stage zebrafish (Danio rerio) Exposure to the Polychlorinated biphenyl mixture Aroclor 1254 elicits neurological and cardiac developmental effects in early life stage zebrafish (Danio rerio)

The goal of this study was to compare the bioaccumulation of the PCB mixture Aroclor 1254 in zebrafish to cardiac and neurologic outcomes. The establishment of effect concentrations (ECs) for cardiac and neurotoxic effects of PCBs in early life stage fish is challenging due to a lack of measured PCB concentrations in test media (e.g., fish tissue), the lack of standard exposure methods...
Authors
Corey A. Green, Jeffrey M. Morris, Jason Tyler Magnuson, Rachel Leads, Claire R. Lay, Michel Gielazyn, Lisa Rosman, Daniel Schlenk, Aaron P. Roberts

Navigating new threats: Prey naivete in native mammals Navigating new threats: Prey naivete in native mammals

1. Invasive predators pose a substantial threat to global biodiversity. Native prey species frequently exhibit naïveté to the cues of invasive predators, and this phenomenon may contribute to the disproportionate impact of invasive predators on prey populations. However, not all species exhibit naïveté, which has led to the generation of many hypotheses to explain patterns in prey...
Authors
Rebecca K. McKee, Kristen Hart, Spencer Zeitoune, Robert A. McCleery

Fish-assemblage evaluation in the lower Sandusky River, Ohio, following dam removal Fish-assemblage evaluation in the lower Sandusky River, Ohio, following dam removal

The Sandusky River, Ohio, USA, has experienced more than a century of alterations, including dam implementation and removal, causing a cascade of habitat changes. The physical changes in the river led to establishment of several invasive species. Ten hoop-net sampling sites, spaced about 500 m apart were established in the river to monitor fish assemblage and their habitat preferences...
Authors
Kailee Amanda Schulz, Matthew Ross Acre, Andrew T. Mueller, James J. Wamboldt, Dustin Broaddus, Tyler Hessler, Tammy Michelle Wilson, Robert L. Mapes, Jon Amberg, Robin D. Calfee

Haploid gynogens facilitate disomic marker development in paleotetraploid sturgeons Haploid gynogens facilitate disomic marker development in paleotetraploid sturgeons

Acipenseriformes (sturgeons and paddlefishes) are of substantial conservation concern, and development of genomic resources for these species is difficult due to past whole genome duplication. Development of disomic markers for polyploid organisms can be challenging due to difficulty in resolving alleles at a single locus from those among duplicated loci. In this study, we detail the...
Authors
Richard Flamio, Dominic G Swift, David S Portnoy, Kimberly Chojnacki, Aaron J. DeLonay, Jeffrey Powell, Patrick Braaten, Edward J. Heist

The MIEM guidelines: Minimum information for reporting of environmental metabarcoding data The MIEM guidelines: Minimum information for reporting of environmental metabarcoding data

Environmental DNA (eDNA) and RNA (eRNA) metabarcoding has become a popular tool for assessing biodiversity from environmental samples, but inconsistent documentation of methods, data and metadata makes results difficult to reproduce and synthesise. A working group of scientists have collaborated to produce a set of minimum reporting guidelines for the constituent steps of metabarcoding...
Authors
Katy E. Klymus, Jacoby D. Baker, Cathryn L. Abbott, Rachel J. Brown, Joseph M. Craine, Zachary Gold, Margaret Hunter, Mark D. Johnson, Devin Nicole Jones-Slobodian, Michelle J. Jungbluth, Sean P. Jungbluth, Yer Lor, Aaron P. Maloy, Christopher M. Merkes, Rachel T. Noble, Nastassia V. Patin, Adam Sepulveda, Stephen Frank Spear, Joshua A. Steele, Miwa Takahashi, Alison W. Watts, Susanna Theroux

A universal method for the simultaneous determination of environmental pollutants in marine biological samples: Per- and polyfluoroalkyl substances and antibiotics as a case study A universal method for the simultaneous determination of environmental pollutants in marine biological samples: Per- and polyfluoroalkyl substances and antibiotics as a case study

Conventional detection technologies for environmental contaminants have primarily focused on providing accurate qualitative and quantitative evaluations for single pollutant types, leading to increased costs and an inability to satisfy the growing demand for detecting a broader spectrum of pollutants. Here, we introduced a novel analytical method to simultaneously measure the...
Authors
Di Fang, Ge Yang, Bentuo Xu, Jialin Li, Jiayi Lin, Chunmiao Zheng, Jason Tyler Magnuson, Wenhui Qiu
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