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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42704

Monitoring the movements of juvenile Pacific Lamprey (Entosphenus tridentatus) in the Yakima River, Washington, using acoustic telemetry, 2019–20 Monitoring the movements of juvenile Pacific Lamprey (Entosphenus tridentatus) in the Yakima River, Washington, using acoustic telemetry, 2019–20

Anthropogenic barriers to main-stem and tributary passage are one of the primary threats associated with declining populations of Pacific Lamprey (Entosphenus tridentatus) in the Columbia River Basin. Juvenile lamprey are of special interest because their downstream migration to the ocean may be affected by barriers such as dams or water diversions. Telemetry studies that describe the...
Authors
Theresa L. Liedtke, Ralph T. Lampman, Patrick Monk, Amy C. Hansen, Tobias J. Kock, Tyler E. Beals, Daniel Z. Deng, Michael S. Porter

Revised taxonomy of rhabdoviruses infecting fish and marine mammals Revised taxonomy of rhabdoviruses infecting fish and marine mammals

Rhabdoviridae is a large family of negative-sense (-) RNA viruses that includes important pathogens of ray-finned fish and marine mammals. As for all viruses, the taxonomic assignment of rhabdoviruses occurs through a process implemented by the International Committee on Taxonomy of Viruses (ICTV). A recent revision of taxonomy conducted in conjunction with the ICTV Rhabdoviridae Study...
Authors
Peter J. Walker, Laurent Bigarre, Gael Kurath, Laurent Dacheux, Laurane Pallandre

Reducing uncertainty in climate change responses of inland fishes: A decision-path approach Reducing uncertainty in climate change responses of inland fishes: A decision-path approach

Climate change will continue to be an important consideration for conservation practitioners. However, uncertainty in identifying appropriate management strategies, particularly for understudied species and regions, constrains the implementation of science-based solutions and adaptation strategies. Here, we share a decision-path approach to reduce uncertainty in climate change responses...
Authors
Abigail Lynch, Bonnie Myers, Jesse P. Wong, Cindy Chu, Ralph W. Tingley, Jeffrey A. Falke, Thomas J. Kwak, Craig P. Paukert, Trevor J. Krabbenhoft

Association of antler asymmetry with hoof disease in elk Association of antler asymmetry with hoof disease in elk

Treponeme-associated hoof disease (TAHD) is an emergent disease of elk (Cervus canadensis) in the Pacific West of the United States. Although lesions are usually restricted to the feet, anecdotal reports suggested increased prevalence of abnormal antlers in affected elk. We used hunter harvest reports for 1,688 adult male elk harvested in southwestern Washington, USA, during 2016-2018...
Authors
Glen A. Sargeant, Margaret A. Wild, Kyle Garrison, Dylan Conradson

The importance of lake emergent aquatic vegetation for estimating Arctic-boreal methane emissions The importance of lake emergent aquatic vegetation for estimating Arctic-boreal methane emissions

Areas of lakes that support emergent aquatic vegetation emit disproportionately more methane than open water but are under-represented in upscaled estimates of lake greenhouse gas emissions. These shallow areas are typically less than ∼1.5 m deep and can be detected with synthetic aperture radar (SAR). To assess the importance of lake emergent vegetation (LEV) zones to landscape-scale...
Authors
Ethan D. Kyzivat, Laurence C. Smith, Fenix Garcia-Tigreros, Chang Huang, Chao Wang, Theodore Langhorst, Jessica V. Fayne, Merritt E. Harlan, Yuta Ishitsuka, Dongmei Feng, Wayana Dolan, Lincoln H. Pitcher, Kimberly Wickland, Mark Dornblaser, Robert G. Striegl, Tamlin M. Pavelsky, David E. Butman, Colin J. Gleason

Worldwide wetland loss and conservation of biodiversity and ecosystem services Worldwide wetland loss and conservation of biodiversity and ecosystem services

Aim: Best strategies for future conservation and management to address global and regional trends in wetland loss and degradation are assessed in this article. Main concepts covered: Direct drivers of wetland loss and change include land drainage and filling, hydrologic alteration, degradation from pollutants and sediments, and conversion to agriculture, urban and industrial usage...
Authors
Beth Middleton

Wetlands under global change Wetlands under global change

Wetlands are among the ecosystem types most threatened by global change, including both climate change and other anthropogenic factors such as sea level rise, urban development, deforestation, agricultural land use, drainage, levees, tidal flow restrictions, pollution, eutrophication, and fires. Wetlands not only store disproportionate amounts of carbon compared to other terrestrial...
Authors
Eric Ward

Societal values of inland fishes Societal values of inland fishes

a. Aim: To demonstrate the societal values of inland fishes through nine services provided by inland fishes. Each service is defined, key stakeholders identified, and threats enumerated. Diverse case studies (geography, taxonomy, fishery-type) provide examples to highlight the societal values around the world. b. Main concepts: Nine societal services of inland fishes – 1. Livelihoods and...
Authors
Abigail Lynch, Robert I. Arthur, Claudio Baigun, Julie E. Claussen, Külli Kangur, Aaron A. Koning, Karen J. Murchie, Bonnie Myers, Gretchen L. Stokes, Ralph William Tingley, So-Jung Youn

Intrapopulation differences in polar bear movement and step selection patterns Intrapopulation differences in polar bear movement and step selection patterns

Background The spatial ecology of individuals often varies within a population or species. Identifying how individuals in different classes interact with their environment can lead to a better understanding of population responses to human activities and environmental change and improve population estimates. Most inferences about polar bear (Ursus maritimus) spatial ecology are based on...
Authors
Ryan R. Wilson, Michelle St Martin, Eric V. Regehr, Karyn D. Rode

Environmental drivers of cyanobacterial abundance and cyanotoxin production in backwaters of the Upper Mississippi River Environmental drivers of cyanobacterial abundance and cyanotoxin production in backwaters of the Upper Mississippi River

High densities of cyanobacteria in aquatic ecosystems can cause impacts to ecosystem services because they serve as a poor-quality food resource, produce toxins and can indirectly cause a variety of other negative impacts to water quality. There are many hypotheses about the potential environmental drivers of variation in cyanobacterial abundance and toxicity, but these hypotheses have...
Authors
Shawn M. Giblin, James H. Larson, Jeremy D. King

Cryptic extinction risk in a western Pacific lizard radiation Cryptic extinction risk in a western Pacific lizard radiation

Cryptic ecologies, the Wallacean Shortfall of undocumented species’ geographical ranges and the Linnaean Shortfall of undescribed diversity, are all major barriers to conservation assessment. When these factors overlap with drivers of extinction risk, such as insular distributions, the number of threatened species in a region or clade may be underestimated, a situation we term ‘cryptic...
Authors
Peter J. McDonald, Rafe M. Brown, Frederick Kraus, Philip Bowles, Umilaela Arifin, Samuel J Eliades, Robert N. Fisher, Maren Gaulke, L Lee Grismer, Ivan Ineich, Benjamin R. Karin, Camila G Meneses, Stephen J Richards, Marites B Sanguila, Cameron D Siler, Paul M. Oliver

Influences of seasonality and habitat quality on Great Lakes coastal wetland fish community composition and diets Influences of seasonality and habitat quality on Great Lakes coastal wetland fish community composition and diets

Great Lakes coastal wetlands (GLCW) have been severely degraded by anthropogenic activity over the last several decades despite their critical role in fish production. Many Great Lakes fish species use coastal wetland habitats for spawning, feeding, shelter, and nurseries throughout the year. The goal of our study was to compare GLCW fish community composition in the spring, summer, and...
Authors
Sara Diller, Anna M. Harrison, Kurt P. Kowalski, Valerie J. Brady, Jan J.H. Ciborowski, Matthew J. Cooper, Joshua D. Dumke, Joseph P. Gathman, Carl R. III Ruetz, Donald G. Uzarski, Douglas A. Wilcox, Jeffrey S Schaeffer
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