Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42707
A user guide to selecting invasive annual grass spatial products for the western United States A user guide to selecting invasive annual grass spatial products for the western United States
Invasive annual grasses (IAGs)—including Bromus tectorum (cheatgrass), Taeniatherum caput-medusae (medusahead), and Ventenata dubia (ventenata) species—present significant challenges for rangeland management by altering plant communities, impacting ecosystem function, reducing forage for wildlife and livestock, and increasing fire risk. Numerous spatial data products are used to map IAGs...
Authors
Nathan D. Van Schmidt, Jessica E. Shyvers, D. Joanne Saher, Bryan C. Tarbox, Julie A. Heinrichs, Cameron L. Aldridge
Compendium to invasive annual grass spatial products for the western United States, January 2010-February 2021 Compendium to invasive annual grass spatial products for the western United States, January 2010-February 2021
Invasive annual grasses (IAGs) degrade native plant communities, alter fire cycles, impact ecosystem processes, and threaten the persistence of some species. Therefore, controlling the spread of IAGs has become a land management priority in the western United States. A wide array of geospatial data has been developed in the last decade to help land managers combat the invasion and...
Authors
D. Joanne Saher, Jessica E. Shyvers, Bryan C. Tarbox, Nathan D. Van Schmidt, Julie A. Heinrichs, Cameron L. Aldridge
FishStan: Hierarchical Bayesian models for fisheries FishStan: Hierarchical Bayesian models for fisheries
Fisheries managers and ecologists use statistical models to estimate population-level relations and demographic rates (e.g., length-maturity curves, growth curves, and mortality rates). These relations and rates provide insight into populations and inputs for other models. For example, growth curves may vary across lakes showing fish populations differ due to management actions or...
Authors
Richard A. Erickson, Daniel S. Stich, Jillian Lee Hebert
Greater sage-grouse respond positively to intensive post-fire restoration treatments Greater sage-grouse respond positively to intensive post-fire restoration treatments
Habitat loss is the most prevalent threat to biodiversity in North America. One of the most threatened landscapes in the United States is the sagebrush (Artemisia spp.) ecosystem, much of which has been fragmented or converted to non-native grasslands via the cheatgrass-fire cycle. Like many sagebrush obligates, greater sage-grouse (Centrocercus urophasianus) depend upon sagebrush for...
Authors
Sharon A. Poessel, David M Barnard, Cara Applestein, Matthew J. Germino, Ethan A. Ellsworth, Donald J. Major, Ann Moser, Todd E. Katzner
Bioaccumulation of perfluoroalkyl substances in a Lake Ontario food web Bioaccumulation of perfluoroalkyl substances in a Lake Ontario food web
Per- and polyfluoroalkyl substances (PFAS) are a group of synthetic chemicals detected throughout the environment. To better understand the distribution of PFAS in an aquatic system (the Laurentian Great Lakes), stable isotope enrichment (δ13C and δ15N), fatty acid (FA) profiles, and PFAS were measured in various species from the Lake Ontario (LO) aquatic food web. Sampled organisms...
Authors
Junda Ren, Adam Point, Sadjad Fakouri Baygi, Sujan Fernando, Philip K. Hopke, Thomas M. Holsen, Brian F. Lantry, Brian Weidel, Bernard S. Crimmins
Microbial source tracking and evaluation of best management practices for restoring degraded beaches of Lake Michigan Microbial source tracking and evaluation of best management practices for restoring degraded beaches of Lake Michigan
Attempts to mitigate shoreline microbial contamination require a thorough understanding of pollutant sources, which often requires multiple years of data collection (e.g., point/nonpoint) and the interacting factors that influence water quality. Because restoration efforts can alter shoreline or beach morphology, revisiting source inputs is often necessary. Microbial source tracking (MST...
Authors
Meredith B. Nevers, Paul M. Buszka, Muruleedhara Byappanahalli, Travis Cole, Steven R. Corsi, P. Ryan Jackson, Julie L. Kinzelman, Cindy H Nakatsu, Mantha S. Phanikumar
Depth drives growth dynamics of dreissenid mussels in Lake Ontario Depth drives growth dynamics of dreissenid mussels in Lake Ontario
Understanding dreissenid mussel population dynamics and their impacts on lake ecosystems requires quantifying individual growth across a range of habitats. Most dreissenid mussel growth rates have been estimated in nutrient rich or nearshore environments, but mussels have continued to expand into deep, cold, low-nutrient habitats of the Great Lakes. We measured annual quagga mussel...
Authors
Ashley Elgin, Paul Glyshaw, Brian Weidel
Evaluation of post-stocking dispersal and mortality of juvenile lake trout Salvelinus namaycush in Lake Ontario using acoustic telemetry Evaluation of post-stocking dispersal and mortality of juvenile lake trout Salvelinus namaycush in Lake Ontario using acoustic telemetry
Wild reproduction by stocked lake trout Salvelinus namaycush in Lake Ontario has yet to produce a self-sustaining population, requiring a reliance on stocking. Once released, age-1 juvenile lake trout are not typically surveyed until age-2, creating a gap in knowledge of fine-scale post-release behaviors. A method to track fine-scale movements and estimate mortality of juvenile lake...
Authors
Alexander J. Gatch, Stacy L. Furgal, Dimitry Gorsky, J. Ellen Marsden, Zy F. Biesinger, Brian F. Lantry
An evaluation of fish spawning on degraded and remnant reefs in Saginaw Bay, Lake Huron An evaluation of fish spawning on degraded and remnant reefs in Saginaw Bay, Lake Huron
Saginaw Bay is a shallow, nutrient-rich embayment in Lake Huron that historically had a complex network of natural rocky reefs. These reef habitats were used as spawning and nursery areas for a variety of fish species, but decades of land-use related sedimentation caused many of these reefs to be degraded. Our study objectives were to analyze abiotic and biotic conditions on degraded and...
Authors
N Kalejs, Mitchell T. Zischke, J. Beugly, P. Collingsworth, Edward F. Roseman, R. Douglas Hunter, D. Fielder, T. Hook
Estimating detection and occupancy of secretive marsh bird species in low and high saline marshes in southwestern Louisiana using automated recording units Estimating detection and occupancy of secretive marsh bird species in low and high saline marshes in southwestern Louisiana using automated recording units
Secretive marsh birds (SMBs) are important indicator species of coastal wetlands but are difficult to detect and monitor. In coastal Louisiana, an important stronghold for these species, climate and hydrological models predict that freshwater and intermediate marshes will expand in the next 50 years, while brackish marshes will shrink. We used a multi-species Bayesian hierarchical...
Authors
Hardin Waddle, Landon R. Jones, Phillip L. Vasseur, Clint W. Jeske
A comparison of eDNA and visual survey methods for detection of longnose darter Percina nasuta in Missouri A comparison of eDNA and visual survey methods for detection of longnose darter Percina nasuta in Missouri
The longnose darter Percina nasuta is a rare and cryptic fish that recently disappeared from much of its historic range. We developed and used an environmental DNA (eDNA) assay for longnose darter paired with visual surveys to better determine the species’ range and compare detection probability between sampling approaches in an occupancy modeling framework. We detected longnose darter...
Authors
Jacob Thomas Westhoff, Leah K. Berkman, Katy E. Klymus, Nathan Thompson, Cathy A. Richter
Comparative virulence of spring viremia of carp virus (SVCV) genotypes in two koi varieties Comparative virulence of spring viremia of carp virus (SVCV) genotypes in two koi varieties
Spring viremia of carp virus (SVCV), is a lethal freshwater pathogen of cyprinid fish, and Cyprinus carpio koi is a primary host species. The virus was initially described in the 1960s after outbreaks occurred in Europe, but a global expansion of SVCV has been ongoing since the late 1990s. Genetic typing of SVCV isolates separates them into 4 genotypes that are correlated with geographic...
Authors
Eveline J. Emmenegger, Emma K. Bueren, Peng Jia, Noble Hendrix, Hong Liu