Publications

Executive Summary Data from a long-term capture-recapture program were used to assess the status and dynamics of populations of two long-lived, federally endangered catostomids in Upper Klamath Lake, Oregon. Lost River suckers (LRS; Deltistes luxatus) and shortnose suckers (SNS; Chasmistes brevirostris) have been captured and tagged with passive integrated transponder (PIT) tags during...

All decisions have the same recognizable elements. Context, objectives, alternatives, consequences, and deliberation. Decision makers and analysts familiar with these elements can quickly see the underlying structure of a decision. There are only a small number of classes of decisions. These classes differ in the cognitive and scientific challenge they present to the decision maker; the...

The Cuban treefrog, Osteopilus septentrionalis, is native to Cuba, the Bahamas, and the Cayman Islands, and is invasive in areas where it has been introduced and established in the Caribbean as well as Florida. Despite repeated occurrences in several states over many years, it was not believed that Cuban treefrogs had successfully established outside of Florida in the mainland United...

Highway programs typically focus on reducing vehicle collisions with large mammals because of economic or safety reasons while overlooking the millions of birds that die annually from traffic. We studied wildlife‐vehicle collisions along an interstate highway in southern Idaho, USA, with among the highest reported rates of American Barn Owl Tyto furcata road mortality. Carcass data from...

Hydraulic connection between channels and floodplains (“connectivity”) is a fundamental determinant of ecosystem function in large floodplain rivers. Factors controlling material processing in these rivers depend not only on the degree of connectivity but also on the sediment conditions, nutrient loads, and source. Nutrient cycling in the nutrient‐rich upper Mississippi River (MISS) is...

Executive Summary The largest populations of federally endangered Lost River (Deltistes luxatus) and shortnose suckers (Chasmistes brevirostris) exist in Upper Klamath Lake, Oregon, and Clear Lake Reservoir, California. Upper Klamath Lake populations are decreasing because adult mortality, which is relatively low, is not being balanced by recruitment of young adult suckers into known...

The Florida manatee (Trichechus manatus latirostris) has limited diversity in the immunoglobulin heavy chain. We therefore investigated the antigen receptor loci of the other arm of the adaptive immune system: the T cell receptor. Manatees are the first species from Afrotheria, a basal eutherian superorder, to have an in-depth characterization of all T cell receptor loci. By annotating...

We surveyed for Least Bell’s Vireos (LBVI) (Vireo bellii pusillus) and Southwestern Willow Flycatchers (SWFL) (Empidonax traillii extimus) along the San Luis Rey River, between College Boulevard in Oceanside and Interstate 15 in Fallbrook, California (middle San Luis Rey River), in 2017. Surveys were conducted from April 13 to July 11 (LBVI) and from May 16 to July 28 (SWFL). We found...

Introduction The year 2017 was a year of review and renewal for the Department of the Interior (DOI) Climate Science Centers (CSCs) and the U.S. Geological Survey (USGS) National Climate Change and Wildlife Science Center (NCCWSC). The Southeast, Northwest, Alaska, Southwest, and North Central CSCs’ 5-year summary review reports were released in 2017 and contain the findings of the...

Preserving remaining nonhybridized populations Cutthroat Trout Oncorhynchus clarkii is a conservation priority often requiring management action. Although proactive programs for Rainbow Trout O. mykiss and hybrid suppression offer a flexible tool, particularly in large interconnected river basins, this management approach is used less frequently than alternatives such as barriers and...

Coastal communities are increasingly concerned about the dynamic balance between freshwater and saltwater because of its implications for societal, economic, and ecological resources. While the mixing of freshwater and saltwater sources defines coastal estuaries and lagoons, sudden changes in this balance can have a large effect on critical ecosystems and infrastructure. Any change to...

Environmental DNA (eDNA) detection is a technique used to non-invasively detect cryptic, low density, or logistically difficult-to-study species, such as imperiled manatees. For eDNA measurement, genetic material shed into the environment is concentrated from water samples and analyzed for the presence of target species. Cytochrome bquantitative PCR and droplet digital PCR eDNA assays...