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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42700

Soil reservoir dynamics of ophidiomyces ophidiicola, the causative agent of snake fungal disease Soil reservoir dynamics of ophidiomyces ophidiicola, the causative agent of snake fungal disease

Wildlife diseases pose an ever-growing threat to global biodiversity. Understanding how wildlife pathogens are distributed in the environment and the ability of pathogens to form environmental reservoirs is critical to understanding and predicting disease dynamics within host populations. Snake fungal disease (SFD) is an emerging conservation threat to North American snake populations...
Authors
Lewis J. Campbell, Joanna Burger, Robert T. Zappalorti, John F. Bunnell, Megan Winzeler, Daniel R. Taylor, Jeffrey M. Lorch

A decision-analytical framework for developing harvest regulations A decision-analytical framework for developing harvest regulations

The development of harvest regulations for fish or wildlife is a complex decision that needs to weigh multiple objectives, consider a set of alternative regulatory options, integrate scientific understanding about the population dynamics of the harvested species as well as the human response to regulations, account for uncertainty, and provide an avenue for feedback from monitoring...
Authors
Michael C. Runge

Predictability of invasive Argentine ant distribution across Mediterranean ecoregions of southern California Predictability of invasive Argentine ant distribution across Mediterranean ecoregions of southern California

The invasiveness of nonnative taxa can vary across a landscape due to environmental gradients, suggesting that location-dependent management strategies may be more effective at reducing spread compared to a “one size fits all” approach across the entire introduced range. Using bait stations placed along linear transects within habitat preserves, we tested for effects of ecoregion...
Authors
Jonathan Q. Richmond, Tritia Matsuda, Cheryl S. Brehme, Emily E. Perkins, Robert N. Fisher

Untargeted lipidomics for determining cellular and sub-cellular responses in Zebrafish (Danio rerio) liver cells following exposure to complex mixtures in U.S. streams Untargeted lipidomics for determining cellular and sub-cellular responses in Zebrafish (Danio rerio) liver cells following exposure to complex mixtures in U.S. streams

Surface waters often contain a variety of chemical contaminants potentially capable of producing adverse outcomes in both humans and wildlife due to impacts from industrial, urban, and agricultural activity. Here, we report the results of a zebrafish liver (ZFL) cell-based lipidomics approach to assess the potential ecotoxicological effects of complex contaminant mixtures using water...
Authors
Huajun Zhen, Quincy Teng, Jonathan D Mosley, Timothy W. Collette, Yang Yue, Paul M. Bradley, Drew R. Ekman

Integrating wildlife habitat models with state-and-transitions models to enhance the management of rangelands for multiple objectives Integrating wildlife habitat models with state-and-transitions models to enhance the management of rangelands for multiple objectives

State-and-transition models (STMs) are tools used in rangeland management to describe linear and nonlinear vegetation dynamics as conceptual models. STMs can be improved by including additional ecosystem services, such as wildlife habitat, so that managers can predict how local populations might respond to state changes and to illustrate the tradeoffs in managing for different ecosystem...
Authors
Jennifer M. Timmer, Crystal Y. Tipton, Retta A. Bruegger, David J. Augustine, Christopher P.K. Dickey, Maria E. Fernandez-Gimenez, Cameron L. Aldridge

A hidden Markov model for estimating age-specific survival when age and size are uncertain A hidden Markov model for estimating age-specific survival when age and size are uncertain

Estimates of age-specific survival probabilities are needed for age-structured population models and to inform conservation decisions. However, determining the age of individuals in wildlife populations is often problematic. We present a hidden Markov model for estimating age-specific survival from capture–recapture or capture–recapture–recovery data when age is unknown and indicators of...
Authors
Timothy A. Gowan, Michael D. Tringali, Jeffrey A. Hostetler, Julien Martin, Leslie I. Ward-Geiger, Jennifer M Johnson

Quantifying the demographic vulnerabilities of dry woodlands to climate and competition using rangewide monitoring data Quantifying the demographic vulnerabilities of dry woodlands to climate and competition using rangewide monitoring data

Climate change is expected to alter the distribution and abundance of tree species, impacting ecosystem structure and function. Yet, anticipating where this will occur is often hampered by a lack of understanding of how demographic rates, most notably recruitment, vary in response to climate and competition across a species range. Using large-scale monitoring data on two dry woodland...
Authors
Robert K Shriver, Charles Yackulic, David M. Bell, John B. Bradford

Using tree swallows to assess reductions in PCB exposure as a result of dredging at Great Lakes Restoration Initiative (GLRI) sites in the Upper Midwest, USA Using tree swallows to assess reductions in PCB exposure as a result of dredging at Great Lakes Restoration Initiative (GLRI) sites in the Upper Midwest, USA

Tree swallows (Tachycineta bicolor) were used to assess the effectiveness of reducing polychlorinated biphenyl (PCB) exposure to wildlife as a result of contaminated sediment removal at locations across the Great Lakes under two dredging scenarios, full or spot dredging. For comparative purposes, other locations where no dredging occurred were also assessed. Calculating accumulation rate...
Authors
Christine M. Custer, Thomas W. Custer, Paul M. Dummer

Sea star wasting disease pathology in Pisaster ochraceus shows a basal-to-surface process affecting color phenotypes differently Sea star wasting disease pathology in Pisaster ochraceus shows a basal-to-surface process affecting color phenotypes differently

Sea star wasting disease (SSWD) refers to a suite of poorly described non-specific clinical signs including abnormal posture, epidermal ulceration, and limb autotomy (sloughing) causing mortalities of over 20 species of sea stars and subsequent ecological shifts throughout the northeastern Pacific. While SSWD is widely assumed to be infectious, with environmental conditions facilitating...
Authors
Thierry M. Work, Tina M. Weatherby, Christopher M. DeRito, Ryan M. Besemer, Ian Hewson

Wildfires and global change Wildfires and global change

No single factor produces wildfires; rather, they occur when fire thresholds (ignitions, fuels, and drought) are crossed. Anomalous weather events may lower these thresholds and thereby enhance the likelihood and spread of wildfires. Climate change increases the frequency with which some of these thresholds are crossed, extending the duration of the fire season and increasing the...
Authors
Juli G. Pausas, Jon Keeley

Impacts of sediment removal from and placement in coastal barrier island systems Impacts of sediment removal from and placement in coastal barrier island systems

Executive Summary On June 24, 2019, Congressman Raul Grijalva of Arizona, Chair of the House Committee on Natural Resources, sent a letter to the directors of the U.S. Fish and Wildlife Service and the U.S. Geological Survey to request their assistance in answering questions regarding coastal sediment resource management within the Coastal Barrier Resources System as defined by the...
Authors
Jennifer L. Miselis, James G. Flocks, Sara Zeigler, Davina Passeri, David R. Smith, Jill R. Bourque, Christopher R. Sherwood, Christopher G. Smith, Daniel J. Ciarletta, Kathryn Smith, Kristen Hart, David C. Kazyak, Alicia Berlin, Bianca Prohaska, Teresa Calleson, Kristi Yanchis

Synthetic aperture radar and optical mapping used to monitor change and replacement of Phragmites australis marsh in the Lower Mississippi River Delta, Louisiana Synthetic aperture radar and optical mapping used to monitor change and replacement of Phragmites australis marsh in the Lower Mississippi River Delta, Louisiana

Synthetic aperture radar (SAR) mapping of density as an enhancement of Phragmites australis optical live fractional cover (LFC) mapping was carried out in the lower Mississippi Delta during 2016 to 2019. Also, as part of the study, the replacement of P. australis with elephant-ear was analyzed. To that end, yearly maps from 2016 to 2019 of L-band SAR horizontal send, vertical receive (HV...
Authors
Elijah W. Ramsey III, Amina Rangoonwala
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