Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42710
State-level freshwater mussel programs: Current status and a research framework to aid in mussel management and conservation State-level freshwater mussel programs: Current status and a research framework to aid in mussel management and conservation
Despite increased focus on their ecology and conservation, freshwater mussels remain one of the most imperiled groups of aquatic organisms. We documented current management actions, resources, and challenges in managing freshwater mussels in the United States through a survey of state natural resource agencies. Approximately 85% of surveyed states (N = 40) actively managed mussel...
Authors
Kristen L. Bouska, Amanda E. Rosenberger, Stephen E. McMurray, Garth A. Lindner, Kayla N. Key
Implications of spatially variable costs and habitat conversion risk in landscape-scale conservation planning Implications of spatially variable costs and habitat conversion risk in landscape-scale conservation planning
“Strategic habitat conservation” refers to a process used by the U.S. Fish and Wildlife Service to develop cost-efficient strategies for conserving wildlife populations and their habitats. Strategic habitat conservation focuses on resolving uncertainties surrounding habitat conservation to meet specific wildlife population objectives (i.e., targets) and developing tools to guide where...
Authors
Max Post van der Burg, Neil Chartier, Ryan G. Drum
Prepublication communication of research results Prepublication communication of research results
Publishing of scientific findings is central to the scientific process, and it is traditional to consider findings “provisional” until accepted by a peer-reviewed journal. Until publication, communication of provisional findings beyond participants in the study is typically limited. This practice helps assure scientific integrity. However, a dilemma arises when a provisional finding has...
Authors
M. J. Adams, Reid N. Harris, Evan H. Campbell Grant, Matthew J. Gray, M. Camille Hopkins, Samuel A. Iverson, Robert Likens, Mark Mandica, D.H. Olson, Alex Shepack, Hardin Waddle
An introduction and practical guide to use of the Soil-Vegetation Inventory Method (SVIM) data An introduction and practical guide to use of the Soil-Vegetation Inventory Method (SVIM) data
Long-term vegetation dynamics across public rangelands in the western United States are not well understood because of the lack of large-scale, readily available historic datasets. The Bureau of Land Management’s Soil-Vegetation Inventory Method (SVIM) program was implemented between 1977 and 1983 across 14 western states, but the data have not been easily accessible. We introduce the...
Authors
Brittany S. Barker, David S. Pilliod, Justin L. Welty, Robert S. Arkle, Michael G. Karl, Gordon Toevs
Using automated radio telemetry to quantify activity patterns of songbirds during stopover Using automated radio telemetry to quantify activity patterns of songbirds during stopover
During migration, birds require stopover habitat to rest and refuel before resuming flight. While long-distance migratory flights represent a large energy investment, stopover accounts for roughly two-thirds of a bird's total energy expenditure during migration. Therefore, birds should minimize energy expenditure while also minimizing time and predation risk during stopover. To...
Authors
Lynn N. Schofield, Jill L. Deppe, Theodore J. Zenzal, Michael P. Ward, Robert H. Diehl, Rachel T. Bolus, Frank R. Moore
Effects of local shoreline and subestuary watershed condition on waterbird community integrity: Influences of geospatial scale and season in the Chesapeake Bay Effects of local shoreline and subestuary watershed condition on waterbird community integrity: Influences of geospatial scale and season in the Chesapeake Bay
In many coastal regions throughout the world, there is increasing pressure to harden shorelines to protect human infrastructures against sea level rise, storm surge, and erosion. This study examines waterbird community integrity in relation to shoreline hardening and land use characteristics at three geospatial scales: (1) the shoreline scale characterized by seven shoreline types...
Authors
Diann J. Prosser, Jessica L. Nagel, Shay Howlin, Paul Marban, Daniel D. Day, R. Michael Erwin
A novel technique for isolating DNA from Tempus™ blood RNA tubes after RNA isolation A novel technique for isolating DNA from Tempus™ blood RNA tubes after RNA isolation
Objective We use Tempus blood RNA tubes (Applied Biosystems) during health assessments of American moose (Alces alces spp.) as a minimally invasive means to obtain RNA. Here we describe a novel protocol to additionally isolate high-quality DNA from the supernatant remaining after the RNA isolation methodology. Metrics used to qualify DNA quality included measuring the concentration...
Authors
Jason A. Ferrante, Michelle R. Giles, Emily Benzie, Margaret Hunter
Using partial aggregation in spatial capture recapture Using partial aggregation in spatial capture recapture
Spatial capture–recapture (SCR) models are commonly used for analysing data collected using noninvasive genetic sampling (NGS). Opportunistic NGS often leads to detections that do not occur at discrete detector locations. Therefore, spatial aggregation of individual detections into fixed detectors (e.g., centre of grid cells) is an option to increase computing speed of SCR analyses...
Authors
Cyril Milleret, Pierre Dupont, Henrik Broseth, Jonas Kindberg, J. Andrew Royle, Richard Bischof
Real-time decision-making during emergency disease outbreaks Real-time decision-making during emergency disease outbreaks
In the event of a new infectious disease outbreak, mathematical and simulation models are commonly used to inform policy by evaluating which control strategies will minimize the impact of the epidemic. In the early stages of such outbreaks, substantial parameter uncertainty may limit the ability of models to provide accurate predictions, and policymakers do not have the luxury of waiting...
Authors
William J. M. Probert, Chris P. Jewell, Marleen Werkman, Christopher.J. Fonnesbeck, Yoshitaka Goto, Michael C. Runge, Satoshi Sekiguchi, Katriona Shea, Matt J. Keeling, Matthew J. Ferrari, Michael J. Tildesley
Impacts of coastal land use and shoreline armoring on estuarine ecosystems: An introduction to a special issue Impacts of coastal land use and shoreline armoring on estuarine ecosystems: An introduction to a special issue
The nearshore land-water interface is an important ecological zone that faces anthropogenic pressure from development in coastal regions throughout the world. Coastal waters and estuaries like Chesapeake Bay receive and process land discharges loaded with anthropogenic nutrients and other pollutants that cause eutrophication, hypoxia, and other damage to shallow-water ecosystems. In...
Authors
Diann J. Prosser, Thomas E. Jordan, Jessica L. Nagel, Rochelle D. Seitz, Donald E. Weller, Dennis F. Whigham
Sex-specific variation in denning by brown bears Sex-specific variation in denning by brown bears
Denning characteristics of brown bears (Ursus arctos) have been described in numerous studies; however, population specific factors (i.e., landscape characteristics and climate) can greatly influence the location and timing of denning. Our objective was to evaluate den-site characteristics and denning chronology for male and female brown bears in Lake Clark National Park and Preserve...
Authors
Lindsey Mangipane, Jerrold L. Belant, Buck Mangipane, David Gustine, Grant V. Hilderbrand
Examination of contaminant exposure and reproduction of ospreys (Pandion haliaetus) nesting in Delaware Bay and River in 2015 Examination of contaminant exposure and reproduction of ospreys (Pandion haliaetus) nesting in Delaware Bay and River in 2015
A study of ospreys (Pandion haliaetus) nesting in the coastal Inland Bays of Delaware, and the Delaware Bay and Delaware River in 2015 examined spatial and temporal trends in contaminant exposure, food web transfer and reproduction. Concentrations of organochlorine pesticides and metabolites, polychlorinated biphenyls (PCBs), coplanar PCB toxic equivalents, polybrominated diphenyl ethers...
Authors
Barnett A. Rattner, Rebecca S. Lazarus, Thomas G. Bean, Peter C. McGowan, Carl R. Callahan, Richard A. Erickson, Robert Hale