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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42710

Characterization of streamflow and nutrient occurrence in the upper White River Basin, Colorado, 1980–2020 Characterization of streamflow and nutrient occurrence in the upper White River Basin, Colorado, 1980–2020

In 2016, Colorado Parks and Wildlife identified filamentous algae collected from the main stem White River as Cladophora glomerata, a pervasive nuisance aquatic alga. Excessive levels of filamentous algae can compromise aesthetic quality, limit recreational activities, and have negative effects on aquatic life including strong fluctuations in dissolved oxygen levels and a reduction in...
Authors
Natalie K. Day

Investigation of potential factors controlling benthic algae in the upper White River Basin, Colorado, 2018–21 Investigation of potential factors controlling benthic algae in the upper White River Basin, Colorado, 2018–21

Nuisance levels of benthic filamentous green algae are becoming increasingly common in surface waters of Colorado and the western United States. In 2018 the U.S. Geological Survey began a study in cooperation with the White River and Douglas Creek Conservation Districts, Colorado River Basin Salinity Control Forum, and the Colorado River Water Conservation District to collect and analyze...
Authors
Natalie K. Day, Mark F. Henneberg

Drivers and timing of grass carp movement within the Sandusky River, Ohio: Implications to potential spawning barrier response strategy Drivers and timing of grass carp movement within the Sandusky River, Ohio: Implications to potential spawning barrier response strategy

Understanding the timing and drivers of migration can be beneficial for improving response efforts aimed at reducing invasive species densities. Efforts by management agencies to remove grass carp (Ctenopharyngodon idella), an invasive species to the Laurentian Great Lakes, have been ongoing in Lake Erie tributaries since 2018. To bolster efforts, deployment of a non-physical barrier has...
Authors
Justin Bopp, Travis O. Brenden, Matthew D. Faust, Christopher Vandergoot, Richard Kraus, James Roberts, Lucas Nathan

The Everglades vulnerability analysis: Linking ecological models to support ecosystem restoration The Everglades vulnerability analysis: Linking ecological models to support ecosystem restoration

Understanding of the Everglades’ ecological vulnerabilities and restoration needs has advanced over the past decade but has not been applied in an integrated manner. To address this need, we developed the Everglades Vulnerability Analysis (EVA), a decision support tool that uses modular Bayesian networks to predict the ecological outcomes of a subset of the ecosystem’s health indicators...
Authors
Laura D’Acunto, Leonard G. Pearlstine, Saira Haider, Caitlin E. Hackett, Dilip Shinde, Stephanie Romanach

Influence of lamprey rearing type on measures of performance Influence of lamprey rearing type on measures of performance

Declines in populations of Pacific Lamprey (Entosphenus tridentatus) have raised concerns by the Columbia River tribes, who then initiated efforts to protect and restore them throughout their historical range. The Columbia River Inter-Tribal Fish Commission (CRITFC) devised a restoration plan for lamprey in the Columbia River Basin which highlights the significance of lamprey to the...
Authors
Theresa L. Liedtke, Lisa K. Weiland, Mary L. Moser, Kinsey Frick, Ralph Lampman, Aaron D. Jackson, Ann Gannam, James Baron, Brian K. Ekstrom

Fusing geophysical and remotely sensed data for observing overwash occurrence, frequency, and impact Fusing geophysical and remotely sensed data for observing overwash occurrence, frequency, and impact

Overwash is an important process that enables a barrier island to migrate landward to adapt to rising sea levels but can also impact vegetated areas and create coastal hazards for populated barrier islands. Our overall objectives were to hindcast overwash events from September 2008 to November 2009 and assess whether overwash impacts could be detected using moderate-resolution imagery...
Authors
Nicholas Enwright, P. Soupy Dalyander, Robert L Jenkins, Elizabeth S. Godsey, Spencer J. Stelly

The pathogenesis of a 2022 North American highly pathogenic clade 2.3.4.4b H5N1 avian influenza virus in mallards (Anas platyrhynchos) The pathogenesis of a 2022 North American highly pathogenic clade 2.3.4.4b H5N1 avian influenza virus in mallards (Anas platyrhynchos)

Highly pathogenic (HP) avian influenza viruses (AIVs) of the clade 2.3.4.4 goose/Guangdong/1996 H5 lineage continue to be a problem in poultry and wild birds in much of the world. The recent incursion of a H5N1 clade 2.3.4.4b HP AIV from this lineage into North America has resulted in widespread outbreaks in poultry and consistent detections of the virus across diverse families of birds...
Authors
Erica Spackman, Mary J. Pantin-Jackwood, Scott A. Lee, Diann Prosser

Monkeypox virus in animals: Current knowledge of viral transmission and pathogenesis in wild animal reservoirs and captive animal models Monkeypox virus in animals: Current knowledge of viral transmission and pathogenesis in wild animal reservoirs and captive animal models

Mpox, formerly called monkeypox, is now the most serious orthopoxvirus (OPXV) infection in humans. This zoonotic disease has been gradually re-emerging in humans with an increasing frequency of cases found in endemic areas, as well as an escalating frequency and size of epidemics outside of endemic areas in Africa. Currently, the largest known mpox epidemic is spreading throughout the...
Authors
Elizabeth Falendysz, Juan G. Lopera, Tonie E. Rocke, Jorge E. Osorio

Assessing arthropod diversity metrics derived from stream environmental DNA: Spatiotemporal variation and paired comparisons with manual sampling Assessing arthropod diversity metrics derived from stream environmental DNA: Spatiotemporal variation and paired comparisons with manual sampling

Background Benthic invertebrate (BI) surveys have been widely used to characterize freshwater environmental quality but can be challenging to implement at desired spatial scales and frequency. Environmental DNA (eDNA) allows an alternative BI survey approach, one that can potentially be implemented more rapidly and cheaply than traditional methods.Methods We evaluated eDNA analogs of BI...
Authors
Aaron W. Aunins, Sara J. Mueller, Jennifer A. Fike, Robert S. Cornman

Soil medium and watering frequency alter growth and allocation for Blue Diamond cholla (Cylindropuntia multigeniculata), a rare cactus of the northeast Mojave Desert, USA Soil medium and watering frequency alter growth and allocation for Blue Diamond cholla (Cylindropuntia multigeniculata), a rare cactus of the northeast Mojave Desert, USA

Blue Diamond cholla (Cylindropuntia multigeniculata (Clokey) Blackb. [Cactaceae]) is a rare cactus of the Mojave Desert. We explored whether cultivation from joint cuttings is a viable method for supporting threatened populations. Terminal joints were collected from adult plants at the type locality and grown in a shade house: We tested whether 2 soil mixes that varied in the ratio of...
Authors
Sara J. Scoles-Sciulla, Alexander Stosich, Lesley A. DeFalco

Assessing tradeoffs between current and desired vegetation condition in a National Park using historical maps and high resolution lidar data Assessing tradeoffs between current and desired vegetation condition in a National Park using historical maps and high resolution lidar data

In the United States, National Park Service Civil War battlefield units are managed for both historical accuracy (i.e., to represent landscape conditions at the time of the conflict for historical interpretation), and for natural resource protection. However, managing for both goals can create conflicts as many battlefields were largely open or in second growth forests historically, but...
Authors
John A. Young, Carolyn Mahan

The invasive plant data landscape: A synthesis of spatial data and applications for research and management in the United States The invasive plant data landscape: A synthesis of spatial data and applications for research and management in the United States

Context An increase in the number and availability of datasets cataloging invasive plant distributions offers opportunities to expand our understanding, monitoring, and management of invasives across spatial scales. These datasets, created using on-the-ground observations and modeling techniques, are made both for and by researchers and managers.Objectives The large number and variety of...
Authors
Emily J. Fusco, Evelyn M. Beaury, Bethany A. Bradley, Michelle Cox, Catherine S. Jarnevich, Adam L. Mahood, R. Chelsea Nagy, Ty Nietupski, Jessica E. Halofsky
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