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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42707

22 years of aquatic plant spatiotemporal dynamics in the upper Mississippi River 22 years of aquatic plant spatiotemporal dynamics in the upper Mississippi River

Macrophyte (aquatic plant) recovery has occurred in rivers worldwide, but assemblage patterns and habitat requirements are generally not well understood. We examined patterns of species composition and macrophyte abundance in the Upper Mississippi River (UMR), spanning 22 years of monitoring and a period of vegetation recovery. Non-metric multidimensional scaling (NMDS) ordination...
Authors
Alicia Carhart, Jason J. Rohweder, Danelle M. Larson

Population dynamics and harvest management of eastern mallards Population dynamics and harvest management of eastern mallards

Managing sustainable harvest of wildlife populations requires regular collection of demographic data and robust estimates of demographic parameters. Estimates can then be used to develop a harvest strategy to guide decision-making. Mallards (Anas platyrhynchos) are an important species in the Atlantic Flyway for many users and they exhibited exponential growth in the eastern United...
Authors
Anthony J. Roberts, Jeffrey A. Hostetler, Joshua C. Stiller, Patrick K. Devers, William Link

Protocol for the reintroduction of California red-legged frogs to Santa Monica Mountains National Recreation Area Protocol for the reintroduction of California red-legged frogs to Santa Monica Mountains National Recreation Area

Once common and widespread in Southern California, California red-legged frogs (Rana draytonii) began declining sometime in the middle of the 20th century. They were listed as threatened under the Endangered Species Act in 1996. Three small and isolated populations remained in Los Angeles and Ventura Counties by the start of the 21st century. The nearest population of California red...
Authors
Kathleen Semple Delaney, Mark Mendelsohn, Sarah M. Wenner, Adam R. Backlin, Elizabeth Gallegos, Robert N. Fisher, Seth P.D. Riley

Automated soft pressure sensor array-based sea lamprey detection using machine learning Automated soft pressure sensor array-based sea lamprey detection using machine learning

Sea lamprey, a destructive invasive species in the Great Lakes in North America, is among very few fishes that rely on oral suction during migration and spawning. Recently, soft pressure sensors have been proposed to detect the attachment of sea lamprey as part of the monitoring and control effort. However, human decision is still required for the recognition of patterns in the measured...
Authors
Hongyang Shi, Yu Mei, Ian González-Afanador, Claudia Chen, Scott M. Miehls, Christopher Holbrook, Nelson Sepulveda, Xiaobo Tan

The NEON Ecological Forecasting Challenge The NEON Ecological Forecasting Challenge

The 21st century continues to be characterized by major changes to the environment and the ecosystem services upon which society depends. Anticipating and responding to these changes requires that scientists explicitly forecast future conditions in real time (Dietze et al. 2018). Ecological forecasting, like weather and epidemiological forecasting, involves integrating data and models to...
Authors
R. Quinn Thomas, Carl Boettiger, Cayelan C. Carey, Michael Dietze, Leah R. Johnson, Melissa A. Kenney, Jason S. McLachlan, Jody A. Peters, Eric R. Sokol, Jake Weltzin, Alyssa Willson, Whitney M. Woelmer

Habitat use by breeding waterbirds in relation to tidal marsh restoration in the San Francisco Bay estuary Habitat use by breeding waterbirds in relation to tidal marsh restoration in the San Francisco Bay estuary

The South Bay Salt Pond Restoration Project aims to restore many former salt production ponds, now managed for wildlife and water quality, to tidal marsh. However, because managed ponds support large densities of breeding waterbirds, reduction of pond habitat may influence breeding waterbird distribution and abundance. We investigated habitat use associated with breeding, feeding, and...
Authors
Carley Rose Schacter, C. Alex Hartman, Mark P. Herzog, Sarah H. Peterson, Max L. Tarjan, Yewei Wang, Cheryl Strong, Rachel Tertes, Neil Warnock, Josh T. Ackerman

Low estradiol production of non-laying whooping cranes (Grus americana) is associated with the failure of small follicles to enter follicular hierarchy Low estradiol production of non-laying whooping cranes (Grus americana) is associated with the failure of small follicles to enter follicular hierarchy

For endangered species managed ex situ, production of offspring is a key factor to ensure healthy and self-sustaining populations. However, current breeding goals for the whooping crane (Grus americana) are impeded by poor reproduction. Our study sought to better understand mechanisms regulating ovarian function in ex situ managed whooping cranes and the regulatory function of the...
Authors
Megan E. Brown, Budhan Pukazhenthi, Glenn H. Olsen, Chris Crowe, Warren Lynch, David E Wildt, Nucharin Songsasen

Status and trends of pelagic and benthic prey fish populations in Lake Michigan, 2022 Status and trends of pelagic and benthic prey fish populations in Lake Michigan, 2022

Fall bottom trawl (fall BT) and lakewide acoustic (AC) surveys are conducted annually to generate indices of pelagic and benthic prey fish densities in Lake Michigan. The fall BT survey has been conducted each fall since 1973 using 12-m trawls at depths ranging from 9 to 110 m at fixed locations distributed across seven transects; this survey estimates densities of seven prey fish...
Authors
Ralph W. Tingley, David Warner, Charles P. Madenjian, Patricia Dieter, Ben Turschak, Dale Hanson, Kristy Phillips, Caleb Geister

Potential factors controlling benthic algae in the upper White River Basin, Colorado, 2018–21 Potential factors controlling benthic algae in the upper White River Basin, Colorado, 2018–21

Nuisance levels of benthic algae are becoming increasingly common in surface waters of the western United States and can compromise aesthetic quality, limit recreational activities, block water infrastructure, and negatively affect aquatic life. In cooperation with the White River and Douglas Creek Conservation Districts, the Colorado River Basin Salinity Control Forum, and the Colorado...
Authors
Rachel G. Gidley, Natalie K. Day

Characterization of streamflow and nutrient occurrence in the upper White River Basin, Colorado, 1980–2020 Characterization of streamflow and nutrient occurrence in the upper White River Basin, Colorado, 1980–2020

In 2016, Colorado Parks and Wildlife identified filamentous algae collected from the main stem White River as Cladophora glomerata, a pervasive nuisance aquatic alga. Excessive levels of filamentous algae can compromise aesthetic quality, limit recreational activities, and have negative effects on aquatic life including strong fluctuations in dissolved oxygen levels and a reduction in...
Authors
Natalie K. Day

Investigation of potential factors controlling benthic algae in the upper White River Basin, Colorado, 2018–21 Investigation of potential factors controlling benthic algae in the upper White River Basin, Colorado, 2018–21

Nuisance levels of benthic filamentous green algae are becoming increasingly common in surface waters of Colorado and the western United States. In 2018 the U.S. Geological Survey began a study in cooperation with the White River and Douglas Creek Conservation Districts, Colorado River Basin Salinity Control Forum, and the Colorado River Water Conservation District to collect and analyze...
Authors
Natalie K. Day, Mark F. Henneberg

Drivers and timing of grass carp movement within the Sandusky River, Ohio: Implications to potential spawning barrier response strategy Drivers and timing of grass carp movement within the Sandusky River, Ohio: Implications to potential spawning barrier response strategy

Understanding the timing and drivers of migration can be beneficial for improving response efforts aimed at reducing invasive species densities. Efforts by management agencies to remove grass carp (Ctenopharyngodon idella), an invasive species to the Laurentian Great Lakes, have been ongoing in Lake Erie tributaries since 2018. To bolster efforts, deployment of a non-physical barrier has...
Authors
Justin Bopp, Travis O. Brenden, Matthew D. Faust, Christopher Vandergoot, Richard Kraus, James Roberts, Lucas Nathan
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