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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42704

Bird habitat value and management priorities of the California Winter Rice Habitat Incentive Program Bird habitat value and management priorities of the California Winter Rice Habitat Incentive Program

Flooding rice (Oryza sativa) agricultural fields during winter to facilitate rice straw decomposition has mitigated the loss of some of the natural wetlands in California’s Central Valley. We conducted bird surveys in 253 rice checks (2,158 ha) within 177 rice fields in the Sacramento Valley during the fall and winter of 2021-2022 and 2022-2023 to evaluate factors influencing bird use of...
Authors
Sarah H. Peterson, Josh T. Ackerman, Carley R. Schacter, C. Alex Hartman, Mark P. Herzog

Advancing at-risk species recovery planning in an era of rapid ecological change with a transparent, flexible, and expert-engaged approach Advancing at-risk species recovery planning in an era of rapid ecological change with a transparent, flexible, and expert-engaged approach

In the face of unprecedented ecological changes, the conservation community needs strategies to recover species at risk of extinction. On the Island of Maui, we collaborated with species experts and managers to assist with climate-resilient recovery planning for 36 at-risk native plant species by identifying priority areas for the management of recovery populations. To do this, we...
Authors
Lucas Fortini, Christina Leopold, Fred Amidon, Devin Leopold, Scott Fretz, James D. Jacobi, Loyal Mehrhoff, Jonathan Price, Fern Duval, Matthew Kier, Hank Oppenheimer, Lauren Weisenburger, Robert Sutter

Determination of antimycin–a in a liquid formulation by high performance liquid chromatography–mass spectrometry Determination of antimycin–a in a liquid formulation by high performance liquid chromatography–mass spectrometry

Pesticide formulations containing the active ingredient antimycin–a (ANT–A) have been used by fisheries and aquaculture managers for several decades to remove nuisance fish species. Analytical methods for measuring ANT–A during pesticide treatments have been done using high performance liquid chromatography (HPLC) paired with multiple detection methods (for example, electrochemical...
Authors
Gavin N. Saari, J. Nolan Steiner, Bryan Lada, Nadia Carmosini

Pathology of lesions in corals from the US Virgin Islands after emergence of stony coral tissue loss disease Pathology of lesions in corals from the US Virgin Islands after emergence of stony coral tissue loss disease

Stony coral tissue loss disease (SCTLD) was first documented in Florida in 2014 and has since spread through the Caribbean causing unprecedented mortality in more than 20 species of corals. The cause of SCTLD is unknown, but bacteria are suspected based on regression of gross lesions in some corals treated with antibiotics. Limited pathology studies on SCTLD exist, but it is likely that...
Authors
Thierry M. Work, Jeff Miller, Thomas Kelley, Aine C. Hawthorn, Tina Weatherby, Caroline Rogers

Ticks without borders: Microbiome of immature neotropical tick species parasitizing migratory songbirds along northern Gulf of Mexico Ticks without borders: Microbiome of immature neotropical tick species parasitizing migratory songbirds along northern Gulf of Mexico

Introduction: The long-distance, seasonal migrations of birds make them an effective ecological bridge for the movement of ticks. The introduction of exotic tick species to new geographical regions can cause the emergence of novel tick-borne pathogens. This study examined the prevalence of exotic tick species parasitizing migratory songbirds at stopover sites along the northern Gulf of...
Authors
Shahid Karim, Theodore J. Zenzal, Lorenza Beati, Raima Sen, Abdulsalam Adegoke, Deepak Kumar, Latoyia P. Downs, Mario Keko, Ashly Nussbaum, Daniel J. Becker, Frank R. Moore

Toxicity of crude oil-derived polar unresolved complex mixtures to Pacific herring embryos: Insights beyond polycyclic aromatic hydrocarbons Toxicity of crude oil-derived polar unresolved complex mixtures to Pacific herring embryos: Insights beyond polycyclic aromatic hydrocarbons

Crude oil toxicity to early life stage fish is commonly attributed to polycyclic aromatic hydrocarbons (PAHs). However, it remains unclear how the polar unresolved complex mixture (UCM), which constitutes the bulk of the water-soluble fraction of crude oil, contributes to crude oil toxicity. Additionally, the role of photomodification-induced toxicity in relation to the polar UCM is not...
Authors
Maxwell L. Harsha, Yanila Salas-Ortiz, Alysha D. Cypher, Ed Osborn, Eduardo Turcios Valle, Jacob L. Gregg, Paul Hershberger, Yuri Kurerov, Sarah King, Aleksandar I. Goranov, Patrick G. Hatcher, Anastasia Konefal, T. Erin Cox, Justin Blaine Greer, James P. Meador, Matthew A. Tarr, Patrick L. Tomco, David C. Podgorski

Balancing the scales: Including under-represented herptile species in a One Health approach Balancing the scales: Including under-represented herptile species in a One Health approach

The One Health High-Level Expert Panel’s definition of One Health includes optimizing the health of people, animals (wild and domestic) and ecosystems. For many One Health practitioners, wildlife that can spread zoonoses are the focus, particularly if they can come in contact with people. However, ecosystem health is often best-indicated by less-encountered species, for instance...
Authors
M. Camille Hopkins, David Lesbarrères, Natalie Claunch, Eveline J. Emmenegger, Bennett Hardy, María Torres-Sánchez, Tariq Stark, Angela Julian, Sarah McGrath-Blaser, Christine Parker-Graham, Katie Haman, Ashley Morgan, Debra C. Miller

Simple stated preference questions can enhance transdisciplinary projects: Linking perceived risks with willingness to spray and pay Simple stated preference questions can enhance transdisciplinary projects: Linking perceived risks with willingness to spray and pay

Transdisciplinary projects can uncover crucial insights on people’s past and future risk-mitigation behavior. We focus on a novel risk context: increasing health threats from ticks on Staten Island, a New York City borough where the combination of high population density and extensive park systems and green spaces has resulted in a rise in locally-acquired tick-transmitted disease cases...
Authors
Aaron Joey Enriquez, Kevin Berry, Maria del Pilar Fernandez, Nichar Gregory, Kacey C. Ernst, Mary H. Hayden, Maria A. Diuk-Wasser

Urban tick exposure on Staten Island is higher in pet owners Urban tick exposure on Staten Island is higher in pet owners

Over the past decade, Lyme and other tick-borne diseases have expanded into urban areas, including Staten Island, New York. While Lyme disease is often researched with a focus on human risk, domestic pets are also at risk of contracting the disease. The present study aims to describe differences in tick exposure, knowledge, attitude, and practices (KAP) between pet owners and non-owners...
Authors
Noriko Tamari, Kacey C. Ernst, Aaron Joey Enriquez, Maria A. Diuk-Wasser, Maria P. Fernandez, Kevin Berry, Mary H. Hayden

Secondary contact erodes Pleistocene diversification in a wide-ranging freshwater mussel (Quadrula) Secondary contact erodes Pleistocene diversification in a wide-ranging freshwater mussel (Quadrula)

The isolated river drainages of eastern North America serve as a natural laboratory to investigate the roles of allopatry and secondary contact in the evolutionary trajectories of recently diverged lineages. Drainage divides facilitate allopatric speciation, but due to their sensitivity to climatic and geomorphological changes, neighboring rivers frequently coalesce, creating recurrent
Authors
Sean M. Keogh, Nathan Johnson, Chase H. Smith, Bernard E. Sietman, Jeffrey T. Garner, Charles R. Randklev, Andrew M. Simons

Assessing predictions from optimal egg theory for an ectotherm relative to habitat duration Assessing predictions from optimal egg theory for an ectotherm relative to habitat duration

Optimal egg size theory predicts females must balance investment per offspring to maximize fitness based on environmental quality. In wetlands, environmental quality can be duration of water and predator presence. Ectotherms using habitats that dry or contain predators are likely under selection to optimize offspring production. We measured reproductive output of wood frogs (Rana...
Authors
Jon M. Davenport, Andrew Feltmann, LeeAnn Fishback, Blake R. Hossack

Patchy response of cheatgrass and nontarget vegetation to indaziflam and imazapic applied after wildfire in sagebrush steppe Patchy response of cheatgrass and nontarget vegetation to indaziflam and imazapic applied after wildfire in sagebrush steppe

Control of nonnative grasses is needed where they are altering fire regimes and degrading rangelands, such as cheatgrass (Bromus tectorum) invasion of perennial sagebrush-steppe communities. Aerial broadcast of the pre-emergent and postemergent herbicide imazapic has been used for decades over vast areas to control cheatgrass after fire. Recent small-scale studies indicate that the pre...
Authors
Chad Raymond Kluender, Matthew J. Germino, Brynne E. Lazarus, Ty Matthews
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