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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42715

Anura—Frogs Anura—Frogs

No abstract available.
Authors
Darrel R. Frost, Emily Moriarty Lemmon, Roy W. McDiarmid, Joseph R. Mendelson III

The pathogenesis of clade 2.3.4.4 H5 highly pathogenic avian influenza viruses in Ruddy Duck (Oxyura jamaicensis) and Lesser Scaup (Aythya affinis) The pathogenesis of clade 2.3.4.4 H5 highly pathogenic avian influenza viruses in Ruddy Duck (Oxyura jamaicensis) and Lesser Scaup (Aythya affinis)

Waterfowl are the natural hosts of avian influenza virus (AIV) and disseminate the virus worldwide through migration. Historically, surveillance and research efforts for AIV in waterfowl have focused on dabbling ducks. The role of diving ducks in AIV ecology has not been well characterized. In this study, we examined the relative susceptibility and pathogenicity of clade 2.3.4.4 H5...
Authors
Erica Spackman, Diann J. Prosser, Mary J. Pantin-Jackwood, Alicia Berlin, Christopher B. Stephens

Salvator merianae (Argentine Tegu). Attempted Predation. Salvator merianae (Argentine Tegu). Attempted Predation.

No abstract available.
Authors
Emma Hanslowe, Charles V. Calafiore, Kathryn N. Sykes, Noah Van Ee, Bryan Falk, Amy Yackel, Robert Reed

Restricted gene flow between resident Oncorhynchus mykiss and an admixed population of anadromous steelhead Restricted gene flow between resident Oncorhynchus mykiss and an admixed population of anadromous steelhead

The species Oncorhynchus mykiss is characterized by a complex life history that presents a significant challenge for population monitoring and conservation management. Many factors contribute to genetic variation in O. mykiss populations, including sympatry among migratory phenotypes, habitat heterogeneity, hatchery introgression, and immigration (stray) rates. The relative influences of...
Authors
Andrew P. Matala, Brady Allen, Shawn R. Narum, Elaine Harvey

Durable terrestrial bedrock predicts submarine canyon formation Durable terrestrial bedrock predicts submarine canyon formation

Though submarine canyons are first-order topographic features of Earth, the processes responsible for their occurrence remain poorly understood. Potentially analogous studies of terrestrial rivers show that the flux and caliber of transported bedload are significant controls on bedrock incision. Here we hypothesize that coarse sediment load could exert a similar role in the formation of...
Authors
Elliot Smith, Noah J. Finnegan, Erich R. Mueller, Rebecca J. Best

Age, year‐class strength variability, and partial age validation of Kiyis from Lake Superior Age, year‐class strength variability, and partial age validation of Kiyis from Lake Superior

ge estimates of Lake Superior Kiyis Coregonus kiyi from scales and otoliths were compared and 12 years (2003–2014) of length frequency data were examined to assess year‐class strength and validate age estimates. Ages estimated from otoliths were precise and were consistently older than ages estimated from scales. Maximum otolith‐derived ages were 20 years for females and 12 years for...
Authors
Taylor A. Lepak, Derek H. Ogle, Mark Vinson

Compositional signatures in acoustic backscatter over vegetated and unvegetated mixed sand-gravel riverbeds Compositional signatures in acoustic backscatter over vegetated and unvegetated mixed sand-gravel riverbeds

Multibeam acoustic backscatter has considerable utility for remote characterization of spatially heterogeneous bed sediment composition over vegetated and unvegetated riverbeds of mixed sand and gravel. However, the use of high-frequency, decimeter-resolution acoustic backscatter for sediment classification in shallow water is hampered by significant topographic contamination of the...
Authors
Daniel D. Buscombe, Paul E. Grams, Matthew A. Kaplinski

Spatial and temporal patterns in golden eagle diets in the western United States, with implications for conservation planning Spatial and temporal patterns in golden eagle diets in the western United States, with implications for conservation planning

Detailed information on diets and predatory ecology of Golden Eagles (Aquila chrysaetos) is essential to prioritize prey species management and to develop landscape-specific conservation strategies, including mitigation of the effects of energy development across the western United States. We compiled published and unpublished data on Golden Eagle diets to (1) summarize available...
Authors
Geoffrey Bedrosian, James W. Watson, Karen Steenhof, Michael N. Kochert, Charles R. Preston, Brian Woodbridge, Gary E. Williams, Kent R. Keller, Ross H. Crandall

Surveillance for highly pathogenic influenza A viruses in California during 2014–2015 provides insights into viral evolutionary pathways and the spatiotemporal extent of viruses in the Pacific Americas Flyway Surveillance for highly pathogenic influenza A viruses in California during 2014–2015 provides insights into viral evolutionary pathways and the spatiotemporal extent of viruses in the Pacific Americas Flyway

We used surveillance data collected in California before, concurrent with, and subsequent to an outbreak of highly pathogenic (HP) clade 2.3.4.4 influenza A viruses (IAVs) in 2014–2015 to (i) evaluate IAV prevalence in waterfowl, (ii) assess the evidence for spill-over infections in marine mammals and (iii) genetically characterize low-pathogenic (LP) and HP IAVs to refine inference on...
Authors
Andrew M. Ramey, Nichola J. Hill, Troy Cline, Magdalena Plancarte, Susan De La Cruz, Michael L. Casazza, Joshua T. Ackerman, Joseph P. Fleskes, T. Winston Vickers, Andrew B. Reeves, Frances Gulland, Christine Fontaine, Diann J. Prosser, Jonathan Runstadler, Walter M. Boyce

Challenges and solutions for applying the travel cost demand model to geographically remote visitor destinations: A case study of bear viewing at Katmai National Park and Preserve Challenges and solutions for applying the travel cost demand model to geographically remote visitor destinations: A case study of bear viewing at Katmai National Park and Preserve

Remote and unique destinations present difficulties when attempting to construct traditional travel cost models to value recreation demand. The biggest limitation comes from the lack of variation in the dependent variable, defined as the number of trips taken over a set time frame. There are various approaches that can be used for overcoming limitations of the traditional travel cost...
Authors
Leslie Richardson, Christopher Huber, John B. Loomis

Using pharyngeal teeth and chewing pads to estimate juvenile Silver Carp total length in the La Grange Reach, Illinois River Using pharyngeal teeth and chewing pads to estimate juvenile Silver Carp total length in the La Grange Reach, Illinois River

The Silver Carp Hypophthalmichthys molitrix is an invasive species in the Mississippi River basin; an understanding of their vulnerability to predation as juveniles may inform control by native predators and predator enhancement (e.g., stocking). Digestion of Silver Carp prey recovered from diets makes it difficult to determine the size‐classes that are most vulnerable to predation by...
Authors
Eli G. Lampo, Brent C. Knights, Jonathan M. Vallazza, Cory A. Anderson, Will T. Rechkemmer, Levi E. Solomon, Andrew F. Casper, Richard M. Pendleton, James T. Lamer

Shifts in an invasive rodent community favoring black rats (Rattus rattus) following restoration of native forest Shifts in an invasive rodent community favoring black rats (Rattus rattus) following restoration of native forest

One potential, unintended ecological consequence accompanying forest restoration is a shift in invasive animal populations, potentially impacting conservation targets. Eighteen years after initial restoration (ungulate exclusion, invasive plant control, and out planting native species) at a 4 ha site on Maui, Hawai'i, we compared invasive rodent communities in a restored native dry...
Authors
Aaron B. Shiels, Arthur C. Medeiros, Erica I. von Allmen
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