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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42853

Timing of warm water refuge use in Crystal River National Wildlife Refuge by manatees—Results and insights from Global Positioning System telemetry data Timing of warm water refuge use in Crystal River National Wildlife Refuge by manatees—Results and insights from Global Positioning System telemetry data

Managers at the U.S. Fish and Wildlife Service Crystal River National Wildlife Refuge (CRNWR) desire to update their management plan regarding the operation of select springs including Three Sisters Springs. They wish to refine existing parameters used to predict the presence of federally threatened Trichechus manatus latirostris (Florida manatee) in the springs and thereby improve their...
Authors
Daniel H. Slone, Susan M. Butler, James P. Reid, Catherine G. Haase

Vaccine effects on heterogeneity in susceptibility and implications for population health management Vaccine effects on heterogeneity in susceptibility and implications for population health management

Heterogeneity in host susceptibility is a key determinant of infectious disease dynamics but is rarely accounted for in assessment of disease control measures. Understanding how susceptibility is distributed in populations, and how control measures change this distribution, is integral to predicting the course of epidemics with and without interventions. Using multiple experimental and...
Authors
Kate E. Langwig, Andrew R. Wargo, Darbi R. Jones, Jessie R. Viss, Barbara J. Rutan, Nicholas A. Egan, Pedro Sa-Guimaraes, Min Sun Kim, Gael Kurath, M. Gabriela M. Gomes, Marc Lipsitch

Intraspecific evolutionary relationships among peregrine falcons in western North American high latitudes Intraspecific evolutionary relationships among peregrine falcons in western North American high latitudes

Subspecies relationships within the peregrine falcon (Falco peregrinus) have been long debated because of the polytypic nature of melanin-based plumage characteristics used in subspecies designations and potential differentiation of local subpopulations due to philopatry. In North America, understanding the evolutionary relationships among subspecies may have been further complicated by...
Authors
Sandra L. Talbot, George K. Sage, Sarah A. Sonsthagen, Megan C. Gravley, Ted Swem, Jeffrey C. Williams, Jonathan L. Longmire, Skip Ambrose, Melanie J. Flamme, Stephen B. Lewis, Laura M. Phillips, Clifford Anderson, Clayton M White

An expert elicitation process to project the frequency and magnitude of Florida manatee mortality events caused by red tide (Karenia brevis) An expert elicitation process to project the frequency and magnitude of Florida manatee mortality events caused by red tide (Karenia brevis)

Red tides (blooms of the harmful alga Karenia brevis) are one of the major sources of mortality for the Florida manatee (Trichechus manatus latirostris), especially in southwest Florida. It has been hypothesized that the frequency and severity of red tides may increase in the future because of global climate change and other factors. To improve our ecological forecast for the effects of...
Authors
Julien Martin, Michael C. Runge, Leanne J. Flewelling, Charles J. Deutsch, Jan H. Landsberg

Hatching success and predation of Bog Turtle (Glyptemys muhlenbergii) eggs in New Jersey and Pennsylvania Hatching success and predation of Bog Turtle (Glyptemys muhlenbergii) eggs in New Jersey and Pennsylvania

Nest-site selection by most turtles affects the survival of females and their offspring. Although bog turtles (Glyptemys muhlenbergii) do not typically leave their wetlands for nesting, nest-site selection can impact hatching success and hatchling survival. Between 1974 and 2012, we monitored the fates of 258 bog turtle eggs incubated in the field and 91 eggs incubated under laboratory...
Authors
Robert T. Zappalorti, Annalee M. Tutterow, Shannon E. Pittman, Jeffrey E. Lovich

Batrachochytrium salamandrivorans and the risk of a second amphibian pandemic Batrachochytrium salamandrivorans and the risk of a second amphibian pandemic

Amphibians are experiencing devastating population declines globally. A major driver is chytridiomycosis, an emerging infectious disease caused by the fungal pathogens Batrachochytrium dendrobatidis (Bd) and Batrachochytrium salamandrivorans (Bsal). Bdwas described in 1999 and has been linked with declines since the 1970s, while Bsal is a more recently discovered pathogen that was...
Authors
Tiffany A. Yap, Natalie T. Nguyen, Megan Serr, Alex Shepak, Vance Vredenburg

A spatial approach to combatting wildlife crime A spatial approach to combatting wildlife crime

Poaching can have devastating impacts on animal and plant numbers, and in many countries has reached crisis levels, with illegal hunters employing increasingly sophisticated techniques. Here, we show how geographic profiling – a mathematical technique originally developed in criminology and recently applied to animal foraging and epidemiology – can be adapted for use in investigations of...
Authors
Sally C. Faulkner, Michael C.A. Stevens, Stephanie S. Romanach, Peter A. Lindsey, Steven C. LeComber

Using halogens (Cl, Br, I) to understand the hydrogeochemical evolution of drought-derived saline porewater beneath a prairie wetland Using halogens (Cl, Br, I) to understand the hydrogeochemical evolution of drought-derived saline porewater beneath a prairie wetland

Numerous closed-basin prairie wetlands throughout the Prairie Pothole Region (PPR) of North America maintain moderate surface pond salinities (total dissolved solids [TDS] from 1 to 10 g L− 1) under semiarid climate by accumulation of gypsum and saline lenses of sulfate-rich porewater (TDS > 10 g L− 1) in wetland sediments during droughts. In order to understand the hydrogeochemical...
Authors
Zeno F. Levy, Christopher T. Mills, Zunli Lu, Martin B. Goldhaber, Donald O. Rosenberry, David M. Mushet, Laura K. Lautz, Xiaoli Zhou, Donald I. Siegel

Estimating disperser abundance using open population models that incorporate data from continuous detection PIT arrays Estimating disperser abundance using open population models that incorporate data from continuous detection PIT arrays

Autonomous passive integrated transponder (PIT) tag antenna systems continuously detect individually marked organisms at one or more fixed points over long time periods. Estimating abundance using data from autonomous antennae can be challenging, because these systems do not detect unmarked individuals. Here we pair PIT antennae data from a tributary with mark-recapture sampling data in...
Authors
Maria C. Dzul, Charles B. Yackulic, Josh Korman

Multi-model comparison highlights consistency in predicted effect of warming on a semi-arid shrub Multi-model comparison highlights consistency in predicted effect of warming on a semi-arid shrub

A number of modeling approaches have been developed to predict the impacts of climate change on species distributions, performance, and abundance. The stronger the agreement from models that represent different processes and are based on distinct and independent sources of information, the greater the confidence we can have in their predictions. Evaluating the level of confidence is...
Authors
Katherine M. Renwick, Caroline Curtis, Andrew R. Kleinhesselink, Daniel R. Schlaepfer, Bethany A. Bradley, Cameron L. Aldridge, Benjamin Poulter, Peter B. Adler

Behavioral response of giant gartersnakes (Thamnophis gigas) to the relative availability of aquatic habitat on the landscape Behavioral response of giant gartersnakes (Thamnophis gigas) to the relative availability of aquatic habitat on the landscape

Most extant giant gartersnake (Thamnophis gigas) populations persist in an agro-ecosystem dominated by rice, which serves as a surrogate to the expansive marshes lost to flood control projects and development of the Great Central Valley of California. Knowledge of how giant gartersnakes use the rice agricultural landscape, including how they respond to fallowing, idling, or crop...
Authors
Gabriel A. Reyes, Brian J. Halstead, Jonathan P. Rose, Julia S. M. Ersan, Anna C. Jordan, Allison M. Essert, Kristen J. Fouts, Alexandria M. Fulton, K. Benjamin Gustafson, Raymund F. Wack, Glenn D. Wylie, Michael L. Casazza

Development of microsatellite loci exhibiting reverse ascertainment bias and a sexing marker for use in Emperor Geese (Chen canagica) Development of microsatellite loci exhibiting reverse ascertainment bias and a sexing marker for use in Emperor Geese (Chen canagica)

The Alaskan population of Emperor Geese (Chen canagica) nests on the Yukon–Kuskokwim Delta in western Alaska. Numbers of Emperor Geese in Alaska declined from the 1960s to the mid-1980s and since then, their numbers have slowly increased. Low statistical power of microsatellite loci developed in other waterfowl species and used in previous studies of Emperor Geese are unable to...
Authors
Megan C. Gravley, George K. Sage, Joel A. Schmutz, Sandra L. Talbot
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