Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 43327
Effects of environmental variables on invasive amphibian activity: Using model selection on quantiles for counts Effects of environmental variables on invasive amphibian activity: Using model selection on quantiles for counts
Many different factors influence animal activity. Often, the value of an environmental variable may influence significantly the upper or lower tails of the activity distribution. For describing relationships with heterogeneous boundaries, quantile regressions predict a quantile of the conditional distribution of the dependent variable. A quantile count model extends linear quantile...
Authors
Benjamin J. Muller, Brian S. Cade, Lin Schwarzkoph
Deciphering the link between doubly uniparental inheritance of mtDNA and sex determination in bivalves: Clues from comparative transcriptomics Deciphering the link between doubly uniparental inheritance of mtDNA and sex determination in bivalves: Clues from comparative transcriptomics
Bivalves exhibit an astonishing diversity of sexual systems and sex-determining mechanisms. They can be gonochoric, hermaphroditic or androgenetic, with both genetic and environmental factors known to determine or influence sex. One unique sex-determining system involving the mitochondrial genome has also been hypothesized to exist in bivalves with doubly uniparental inheritance (DUI) of...
Authors
Charlotte Capt, Sébastien Renaut, Fabrizio Ghiselli, Liliana Milani, Nathan A. Johnson, Bernard E. Sietman, Donald Stewart, Sophie Breton
Long‐term trends in fall age ratios of black brant Long‐term trends in fall age ratios of black brant
Accurate estimates of the age composition of populations can inform past reproductive success and future population trajectories. We examined fall age ratios (juveniles:total birds) of black brant (Branta bernicla nigricans; brant) staging at Izembek National Wildlife Refuge near the tip of the Alaska Peninsula, southwest Alaska, USA, 1963 to 2015. We also investigated variation in fall...
Authors
David H. Ward, Courtney L. Amundson, Robert A. Stehn, Christian P. Dau
Forest floor and mineral soil respiration rates in a northern Minnesota red pine chronosequence Forest floor and mineral soil respiration rates in a northern Minnesota red pine chronosequence
We measured total soil CO2 efflux (RS) and efflux from the forest floor layers (RFF) in red pine (Pinus resinosaAit.) stands of different ages to examine relationships between stand age and belowground C cycling. Soil temperature and RS were often lower in a 31-year-old stand (Y31) than in 9-year-old (Y9), 61-year-old (Y61), or 123-year-old (Y123) stands. This pattern was most apparent...
Authors
Matthew Powers, Randall Kolka, John B. Bradford, Brian J. Palik, Martin Jurgensen
Preparing for an uncertain future: Migrating shorebird response to past climatic fluctuations in the Prairie Potholes Preparing for an uncertain future: Migrating shorebird response to past climatic fluctuations in the Prairie Potholes
The Prairie Pothole Region, situated in the northern Great Plains, provides important stopover habitat for migratory shorebirds. During spring migration in the U.S. Prairie Potholes, 7.3 million shorebirds refuel in the region's myriad small, freshwater wetlands. Shorebirds use mudflats, shorelines, and ephemeral wetlands that are far more abundant in wet years than dry years. Generally...
Authors
Valerie A. Steen, Susan K. Skagen, Barry R. Noon
The northern pike, a prized native but disastrous invasive: Chapter 14 The northern pike, a prized native but disastrous invasive: Chapter 14
As the chapters in this book describe, the northern pike Esox lucius Linneaus, 1758 is a fascinating fish that plays an important ecological role in structuring aquatic communities (chapter 8), has the capacity to aid lake restoration efforts (chapter 11), and contributes substantially to local economies, both as a highlysought after sport fish (chapter 12) and as a commercial fishing...
Authors
David Rutz, Robert L. Massengill, Adam J. Sepulveda, Kristine J. Dunker
Resource competition model predicts zonation and increasing nutrient use efficiency along a wetland salinity gradient Resource competition model predicts zonation and increasing nutrient use efficiency along a wetland salinity gradient
A trade-off between competitive ability and stress tolerance has been hypothesized and empirically supported to explain the zonation of species across stress gradients for a number of systems. Since stress often reduces plant productivity, one might expect a pattern of decreasing productivity across the zones of the stress gradient. However, this pattern is often not observed in coastal...
Authors
Donald R. Schoolmaster, Camille L. Stagg
Sirenian life history Sirenian life history
Sirenians, including the manatees and dugongs, are large herbivorous mammals that have evolved to an aquatic form since the Eocene epoch. Sirenians have unique adaptations, including dense bone for ballast and a longitudinal hemidiaphragm separating paired lungs (which aid in maintaining a horizontal posture in the water column), species-specific rostral deflection, and unique dentition...
Authors
Robert K. Bonde
The effect of isolation, fragmentation, and population bottlenecks on song structure of a Hawaiian honeycreeper The effect of isolation, fragmentation, and population bottlenecks on song structure of a Hawaiian honeycreeper
Little is known about how important social behaviors such as song vary within and among populations for any of the endemic Hawaiian honeycreepers. Habitat loss and non‐native diseases (e.g., avian malaria) have resulted in isolation and fragmentation of Hawaiian honeycreepers within primarily high elevation forests. In this study, we examined how isolation of Hawai'i ‘amakihi...
Authors
Joshua M. Pang-Ching, Kristina L. Paxton, Eben H. Paxton, Adam A. Pack, Patrick J. Hart
Validation of ATR FT-IR to identify polymers of plastic marine debris, including those ingested by marine organisms Validation of ATR FT-IR to identify polymers of plastic marine debris, including those ingested by marine organisms
Polymer identification of plastic marine debris can help identify its sources, degradation, and fate. We optimized and validated a fast, simple, and accessible technique, attenuated total reflectance Fourier transform infrared spectroscopy (ATR FT-IR), to identify polymers contained in plastic ingested by sea turtles. Spectra of consumer good items with known resin identification codes...
Authors
Melissa R. Jung, F. David Horgen, Sara V. Orski, Viviana Rodriguez, Kathryn L. Beers, George H. Balazs, T. Todd Jones, Thierry M. Work, Kayla C. Brignac, Sarah-Jeanne Royer, David K. Hyrenbach, Brenda A. Jensen, Jennifer M. Lynch
Using expert knowledge to incorporate uncertainty in cause-of-death assignments for modeling of cause-specific mortality Using expert knowledge to incorporate uncertainty in cause-of-death assignments for modeling of cause-specific mortality
Implicit and explicit use of expert knowledge to inform ecological analyses is becoming increasingly common because it often represents the sole source of information in many circumstances. Thus, there is a need to develop statistical methods that explicitly incorporate expert knowledge, and can successfully leverage this information while properly accounting for associated uncertainty...
Authors
Daniel P. Walsh, Andrew S. Norton, Daniel J. Storm, Timothy R. Van Deelen, Dennis M. Heisy
The migratory bird treaty and a century of waterfowl conservation The migratory bird treaty and a century of waterfowl conservation
In the final decades of the nineteenth century, concern was building about the status of migratory bird populations in North America. In this literature review, we describe how that concern led to a landmark conservation agreement in 1916, between the United States and Great Britain (on behalf of Canada) to conserve migratory birds shared by Canada and the United States. Drawing on...
Authors
Michael G. Anderson, Ray T. Alisauskas, Bruce D. J. Batt, Robert J. Blohm, Kenneth F. Higgins, Matthew Perry, James K. Ringelman, James S. Sedinger, Jerome R. Serie, David E. Sharp, David L. Trauger, Christopher K. Williams