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Browse more than 65,000 articles authored by our scientists over the past 100+ year history of the USGS and refine search by topic, location, year, and advanced search.

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Replacement of the typical artedi form of Coregonus artedi in Lake Huron by endemic shallow-water Ciscoes, including putative hybrids Replacement of the typical artedi form of Coregonus artedi in Lake Huron by endemic shallow-water Ciscoes, including putative hybrids

Various ecomorphs of shallow-water Cisco Coregonus artedi were the dominant fish planktivores in each of the Great Lakes until invasive species and over fishing resulted in extirpations and extinctions. In this paper we describe the present morphological diversity and distribution of shallow-water Ciscoes in each of Lake Huron’s three basins: the main basin, Georgian Bay, and North...
Authors
Randy L. Eshenroder, Yu-Chun Kao, Timothy P. O’Brien, Chris M. Olds, Chris L. Davis, Alexander T. Duncan

Urban heat island and its regional impacts using remotely sensed thermal data – A review of recent developments and methodology Urban heat island and its regional impacts using remotely sensed thermal data – A review of recent developments and methodology

Many novel research algorithms have been developed to analyze urban heat island (UHI) and UHI regional impacts (UHIRIP) with remotely sensed thermal data tables. We present a comprehensive review of some important aspects of UHI and UHIRIP studies that use remotely sensed thermal data, including concepts, datasets, methodologies, and applications. We focus on reviewing progress on multi...
Authors
Hua Shi, George Z. Xian, Roger F. Auch, Kevin Gallo, Qiang Zhou

Adaptive two-stage inverse sampling design to estimate density, abundance, and occupancy of rare and clustered populations Adaptive two-stage inverse sampling design to estimate density, abundance, and occupancy of rare and clustered populations

Sampling rare and clustered populations is challenging because of the effort required to find rare units. Heuristically, a practitioner would prefer to discontinue sampling in areas where rare units of interest are apparently extremely sparse or absent. We take advantage of the characteristics of inverse sampling to adaptively inform practitioners when it is efficient to move on to...
Authors
Mohammad Salehi, David R. Smith

Can Landsat 7 preserve its science capability with a drifting orbit? Can Landsat 7 preserve its science capability with a drifting orbit?

Since 2017, the orbit of Landsat 7 has drifted outside its nominal mission requirement toward an earlier acquisition time because of limited onboard fuel resources. This makes quantitative analyses from Landsat 7 data potentially unreliable for many scientific studies. To comprehensively understand the effect of ongoing (2018–2020) orbit drift on Landsat 7 data, we compared surface...
Authors
Shirley Qiu, Zhe Zhu, Rong Shang, Christopher J. Crawford

Opportunities and challenges of macrogenetic studies Opportunities and challenges of macrogenetic studies

The rapidly emerging field of macrogenetics focuses on analysing publicly accessible genetic datasets from thousands of species to explore large-scale patterns and predictors of intraspecific genetic variation. Facilitated by advances in evolutionary biology, technology, data infrastructure, statistics and open science, macrogenetics addresses core evolutionary hypotheses (such as...
Authors
Deborah M. Leigh, Charles B. van Rees, Katie L Millette, Martin F Breed, Chloé Schmidt, Laura D. Bertola, Brian K. Hand, Margaret Hunter, Evelyn L. Jensen, Francine Kershaw, Libby Liggins, Gordon Luikart, Stephanie Manel, Joachim Mergeay, Joshua M. Miller, Gernot Segelbacher, Sean M. Hoban, Ivan Paz-Vinas

Incorporating antenna detections into abundance estimates of fish Incorporating antenna detections into abundance estimates of fish

Autonomous passive integrated transponder (PIT) tag antennas are commonly used to detect fish marked with PIT tags but cannot detect unmarked fish, creating challenges for abundance estimation. Here we describe an approach to estimate abundance from paired physical capture and antenna detection data in closed and open mark-recapture models. Additionally, for open models, we develop an...
Authors
Maria C. Dzul, Charles B. Yackulic, William L. Kendall, Dana L. Winkelman, Mary M Conner, Michael D. Yard

Noble gas signatures constrain oil-field water as the carrier phase of hydrocarbons occurring in shallow aquifers in the San Joaquin Basin, USA Noble gas signatures constrain oil-field water as the carrier phase of hydrocarbons occurring in shallow aquifers in the San Joaquin Basin, USA

Noble gases record fluid interactions in multiphase subsurface environments through fractionation processes during fluid equilibration. Water in the presence of hydrocarbons at the subsurface acquires a distinct elemental signature due to the difference in solubility between these two fluids. We find the atmospheric noble gas signature in produced water is partially preserved after...
Authors
Ruta Karolyte, Peter H. Barry, Andrew G. Hunt, Justin T. Kulongoski, R. L. Tyne, Tracy Davis, Michael T. Wright, Peter B. McMahon, C. J. Ballentine

Response to “Connectivity and pore accessibility in models of soil carbon cycling” Response to “Connectivity and pore accessibility in models of soil carbon cycling”

Here we respond to Baveye and colleagues' recent critique of our PROMISE model, describing how this new framework significantly advances our understanding of soil spatial heterogeneity and its influence on organic matter transformations.
Authors
Bonnie G. Waring, Benjamin N. Sulman, Sasha C. Reed, A. Peyton Smith, Colin Averill, Courtney Ann Creamer, Daniela F. Cusack, Steven J. Hall, Julie D. Jastrow, Andrea Jilling, Kenneth M. Kemner, Markus Kleber, Xiao-Jun Allen Liu, Jennifer Pett-Ridge, Marjorie S. Schulz

The ecology of river ice The ecology of river ice

Many of the world's rivers are ice-covered during winter months but increasing evidence indicates that the extent of river ice will shift substantially as winters warm. However, our knowledge of rivers during winter lags far behind that of the growing season, limiting our understanding of how ice loss will affect rivers. Physical, chemical, and biological processes change from headwaters...
Authors
Audrey Thellman, Kathi Jo Jankowski, Brian Hayden, Xiao Yang, Wayana Dolan, Adrianne P Smits, Antoin M O’Sullivan

The roles of antimicrobial resistance, phage diversity, isolation source, and selection in shaping the genomic architecture of Bacillus anthracis The roles of antimicrobial resistance, phage diversity, isolation source, and selection in shaping the genomic architecture of Bacillus anthracis

Bacillus anthracis, the causative agent of anthrax disease, is a worldwide threat to livestock, wildlife and public health. While analyses of genetic data from across the globe have increased our understanding of this bacterium’s population genomic structure, the influence of selective pressures on this successful pathogen is not well understood. In this study, we investigate the effects...
Authors
Spencer A. Bruce, Yen-Hua Huang, Pauline L. Kamath, Henriette van Heerden, Wendy Christine Turner

Warmer winters increase the biomass of phytoplankton in a large floodplain river Warmer winters increase the biomass of phytoplankton in a large floodplain river

Winters are changing rapidly across the globe but the implications for aquatic productivity and food webs are not well understood. In addition, the degree to which winter dynamics in aquatic systems respond to large-scale climate versus ecosystem-level factors is unclear but important for understanding and managing potential changes. We used a unique winter data set from the Upper...
Authors
Kathi Jo Jankowski, Jeffrey N. Houser, Mark D. Schuerell, Adrianne P Smits

Optimization of a suite of flathead catfish (Pylodictis olivaris) microsatellite markers for understanding the population genetics of introduced populations in the northeast United States Optimization of a suite of flathead catfish (Pylodictis olivaris) microsatellite markers for understanding the population genetics of introduced populations in the northeast United States

Flathead catfish are rapidly expanding into nonnative waterways throughout the United States. Once established, flathead catfish may cause disruptions to the local ecosystem through consumption and competition with native fishes, including species of conservation concern. Flathead catfish often become a popular sport fish in their introduced range, and so management strategies must...
Authors
Shannon L. White, Michael S. Eackles, Tyler Wagner, Megan K. Schall, Geoffrey Smith, Julian Avery, David C. Kazyak
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