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Browse more than 65,000 articles authored by our scientists over the past 100+ year history of the USGS and refine search by topic, location, year, and advanced search.

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Divergence in salinity tolerance of northern Gulf of Mexico eastern oysters under field and laboratory exposure Divergence in salinity tolerance of northern Gulf of Mexico eastern oysters under field and laboratory exposure

The eastern oyster, Crassostrea virginica, is a foundation species within US Gulf of Mexico (GoM) estuaries that has experienced substantial population declines. As changes from management and climate are expected to continue to impact estuarine salinity, understanding how local oyster populations might respond and identifying populations with adaptations to more extreme changes in...
Authors
D.A. Marshall, S.M. Casas, W.C. Walton, F.S. Rikard, T.A. Palmer, N. Breaux, Megan K. La Peyre, J.B. Pollack, M.A. Kelly, J.F. LaPeyre

Physiological and nutritional constraints on zooplankton productivity due to eutrophication and climate change predicted using a resource-based modeling approach Physiological and nutritional constraints on zooplankton productivity due to eutrophication and climate change predicted using a resource-based modeling approach

Emerging evidence suggests that zooplankton production is affected by physiological and nutritional constraints due to climate change and eutrophication, which in turn could have broad implications for food-web dynamics and fisheries production. In this study, we developed a resource-based zooplankton production dynamics model that causally links freshwater cladoceran and copepod daily...
Authors
Chen Zhang, Michael T. Brett, Jens M Nielsen, George B Arhonditsis, Ashley P Ballantyne, Jackie L Carter, Jacob Kann, Dorthe C Muller-Navarra, Daniel E. Schindler, Jason D. Stockwell, Monika Winder, David Beauchamp

Disruption of the Francisella noatunensis orientalis pdpA gene results in virulence attenuation and protection in zebrafish Disruption of the Francisella noatunensis orientalis pdpA gene results in virulence attenuation and protection in zebrafish

Several Francisella spp. including F. noatunensis are regarded as important emerging pathogens of wild and farmed fish. However, very few studies have investigated the virulence factors that allow these bacterial species to be pathogenic in fish. The Francisella Pathogenicity Island (FPI) is a well-described, gene-dense region encoding major virulence factors for the genus Francisella...
Authors
John D. Hansen, Karina Ray, Po-Jui Chen, Susan Yun, Diane G. Elliott, Carla M. Conway, Michael Culcutt, Maureen K. Purcell, Timothy J Welch, John Patrick Bellah, Ellie Maureen Dalsky, Justin Blaine Greer, Esteban Soto

Amphibian population responses to mitigation: Relative importance of wetland age and design Amphibian population responses to mitigation: Relative importance of wetland age and design

Wetland creation is a common practice to mitigate for the loss of natural wetlands. However, there is still uncertainty about how effectively created wetlands replace habitat provided by natural wetlands. This uncertainty is due in part because post-construction monitoring of biological communities, and vertebrates especially, is rare and typically short-term (
Authors
Emily Bea Oja, Leah S Swartz, Erin L. Muths, Blake R. Hossack

Connecting regional-scale tree distribution models with seed dispersal kernels Connecting regional-scale tree distribution models with seed dispersal kernels

Regional scale forest distribution models are important tools for biogeography and understanding the structure of forest communities in space. These models take climate and geographic variables as input and are therefore helpful for long-term decision support and climate adaptation planning. Generally, local processes of tree germination and seedling survival are resolved...
Authors
Ram C. Neupane, James A. Powell, Thomas C. Edwards

Wetland selection by female Ring-Necked Ducks (Aythya collaris) in the Southern Atlantic Flyway Wetland selection by female Ring-Necked Ducks (Aythya collaris) in the Southern Atlantic Flyway

On the wintering grounds, wetland selection by waterfowl is influenced by spatiotemporal resource distribution. The ring-necked duck (Aythya collaris) winters in the southeastern United States where a disproportionate amount of Atlantic Flyway ring-necked duck harvest occurs. We quantified female ring-necked duck selection for wetland characteristics during and after the 2017-2018 and...
Authors
Tori D. Mezebish, Richard B. Chandler, Glenn H. Olsen, Michele Goodman, Frank C. Rohwer, Nicholas J. Meng

Solutions in microbiome engineering: Prioritizing barriers to organism establishment Solutions in microbiome engineering: Prioritizing barriers to organism establishment

Microbiome engineering is increasingly being employed as a solution to challenges in health, agriculture, and climate. Often manipulation involves inoculation of new microbes designed to improve function into a preexisting microbial community. Despite, increased efforts in microbiome engineering inoculants frequently fail to establish and/or confer long-lasting modifications on ecosystem...
Authors
Michaeline B.N. Albright, Stilianos Louca, Daniel E. Winkler, Kelli L. Feeser, Sarah-Jane Haig, Katrine L. Whiteson, Joanne B. Emerson, John M. Dunbar

Evaluating the state-of-the-art in remote volcanic eruption characterization Part II: Ulawun volcano, Papua New Guinea Evaluating the state-of-the-art in remote volcanic eruption characterization Part II: Ulawun volcano, Papua New Guinea

Retrospective eruption characterization is valuable for advancing our understanding of volcanic systems and evaluating our observational capabilities, especially with remote technologies (defined here as a space-borne system or non-local, ground-based instrumentation which include regional and remote infrasound sensors). In June 2019, the open-system Ulawun volcano, Papua New Guinea...
Authors
Kathleen McKee, Cassandra Marie Smith, Kevin Reath, Eveanjelene Snee, Sean Maher, Robin S. Matoza, Simon A Carn, Diana Roman, Larry G. Mastin, Kyle R. Anderson, David Damby, Ima Itikarai, Kila Mulina, Steve Saunders, Jelle D. Assink, Rodrigo de Negri Levia, Anna Perttu

Cohesive sediment modeling in a shallow estuary: Model and environmental implications of sediment parameter variation Cohesive sediment modeling in a shallow estuary: Model and environmental implications of sediment parameter variation

Numerical models of sediment transport in estuarine systems rely on parameter values that are often poorly constrained and can vary on timescales relevant to model processes. The selection of parameter values can affect the accuracy of model predictions, while environmental variation of these parameters can impact the temporal and spatial ranges of sediment fluxes, erosion, and...
Authors
Rachel Allen, Jessica R. Lacy, Andrew W. Stevens

Assessing the ecological functionality and integrity of natural ponds, excavated ponds and stormwater basins for conserving amphibian diversity Assessing the ecological functionality and integrity of natural ponds, excavated ponds and stormwater basins for conserving amphibian diversity

Wetlands provide ecological functionality by maintaining and promoting regional biodiversity supporting quality habitat for aquatic organisms. Globally, habitat loss, fragmentation and degradation due to increases in agricultural activities and urban development have reduced or altered geographically isolated wetlands, thus reducing biodiversity. The objective of this study was to assess...
Authors
Kelly L. Smalling, Sara E. Breitmeyer, John F. Bunnell, Kim J Laidig, Patrick Burritt, Marilyn Sobel, Jonathan Cohl, Michelle L. Hladik, Kristin M. Romanok, Paul M. Bradley
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