Publications
Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS. Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.
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It's about time: A multistate semicontinuous time mark–recapture model to evaluate seasonal survival and movement rates of juvenile Coho Salmon in a small coastal watershed It's about time: A multistate semicontinuous time mark–recapture model to evaluate seasonal survival and movement rates of juvenile Coho Salmon in a small coastal watershed
Objective Many mark–recapture models assume that releases and recaptures are discrete events, and researchers often aggregate continuous recapture data (e.g., passive integrated transponder [PIT] detections) into coarse temporal scales to satisfy this assumption. This temporal discretization could result in parameter biases by ignoring the individual heterogeneity in the time susceptible...
Authors
Nicholas P. Van Vleet, Darren Ward, Nicholas A. Som, Daniel C. Barton, Colin Anderson, Mark J. Henderson
A heuristic method to evaluate consequences for flight control and stability induced by attachment of biologging devices to birds and bats A heuristic method to evaluate consequences for flight control and stability induced by attachment of biologging devices to birds and bats
Biologging is central to the study of wildlife, but questions remain about the minimization of effects of biologging devices. Rarely considered are changes biologging devices induce on an animal's centre of mass (COM) and resulting losses of flight control and stability.We applied established aeronautical principles to estimate how the COM of a flying bird or bat may be affected by the...
Authors
Todd E. Katzner, George Young
In-situ valve opening response of eastern oysters to estuarine conditions In-situ valve opening response of eastern oysters to estuarine conditions
High-frequency recordings of valve opening behavior (VOB) in bivalves are often used to detect changes in environmental conditions. However, generally a single variable such as temperature or the presence of toxicants in the water is the focus. A description of routine VOB under non-stressful conditions is also important for interpreting responses to environmental changes. Here we...
Authors
Romain Lavaud, Stephanie K. Archer, Megan K. La Peyre, Finella M. Campanino, Sandra M. Casas, Jerome F. La Peyre
The Amazon Basin’s rivers and lakes support Nearctic-breeding shorebirds during southward migration The Amazon Basin’s rivers and lakes support Nearctic-breeding shorebirds during southward migration
Identifying the migration routes and stopover sites used by declining species is critical for developing targeted conservation actions. Long-distance migratory shorebirds are among the groups of birds declining most rapidly, yet we frequently lack detailed knowledge about the routes and stopover sites they use during their hemisphere-spanning migrations. This is especially true for...
Authors
Jennifer A. Linscott, Enzo Basso, Rosalyn Bathrick, Juliana Bosi de Almeida, Alexandra Anderson, Fernando Angulo-Pratolongo, Bart M Ballard, Joel Bety, Stephen Brown, Katherine S. Christie, Sarah J. Clements, Christian Friis, Callie Gesmundo, Marie-Andree Giroux, Autumn-Lynn Harrison, Christopher M. Harwood, Jason M. Hill, James A. Johnson, Bart Kempenaers, Benoit Laliberte, Jean-Francois Lamarre, Richard B. Lanctot, Christopher Latty, Nicolas Lecomte, Laura Anne McDuffie, Juan G. Navedo, Erica Nol, Zachary M. Pohlen, Jennie Rausch, R.B. Renfrew, Jorge Ruiz, Mike Russell, Daniel R. Ruthrauff, Sarah T. Saalfeld, Brett K. Sandercock, Shiloh A. Schulte, Paul A Smith, Audrey R. Taylor, T. Lee Tibbitts, Mihai Valcu, Mitch D. Weegman, James R. Wright, Nathan R. Senner
Comparison of imaging flow cytometry and microscopy for freshwater algal bloom detection Comparison of imaging flow cytometry and microscopy for freshwater algal bloom detection
Imaging flow cytometry (IFC) is an emerging tool that allows for rapid identification and enumeration of phytoplankton in freshwater systems. However, few studies have assessed the effects of preservation on IFC results or compared live IFC and microscopy results in freshwater systems. Understanding the effects of preservation and differences between IFC and microscopy will improve...
Authors
Sabina R. Gifford, A. St. Amand, Jennifer L. Graham, Guy M. Foster, Cory Sauve, Denise Clark, Hannah Schroeder-Larkins
Volcanoes of American Samoa Volcanoes of American Samoa
Upu Amata (Introduction) O le Atu-Samoa o le tasi lenei o faʻasologa motu mauga mu i le Vasa Pasefika i Saute. O motu e pito i sasaʻe o nei faʻasologa mauga mu o le Atu-Samoa, o motu ia o Amerika Samoa. E tofu lava mauga mu taʻitasi o Amerika Samoa ma ona talaaga aemaise tulaga e tutupu e ono pa ai i le lumanai. O loʻo galulue faʻatasi le Ofisa o le U.S. Geological Survey (USGS) ma le...
Authors
Natalia I. Deligne, Drew T. Downs, Elinor Lutu-McMoore, Steven Sobieszczyk, Wendy K. Stovall
Threshold changes in winter temperature and precipitation drive threshold responses across nine global climate zones and associated biomes Threshold changes in winter temperature and precipitation drive threshold responses across nine global climate zones and associated biomes
Globally, winter temperatures are rising, and snowpack is shrinking or disappearing entirely. Despite previous research and published literature reviews, it remains unknown whether biomes across the globe will cross important thresholds in winter temperature and precipitation that will lead to significant ecological changes. Here, we combine the widely used Köppen–Geiger climate...
Authors
Alexandra R. Contosta, Kyle A. Arndt, Helen M. Baulch, Nora J. Casson, Adrian Harpold, Toni Lyn Morelli, Alexej P.K. Siren, Pamela H. Templer
eZ flow metrics: Using z-scores to estimate deviations from natural flow in the Colorado River below Glen Canyon Dam eZ flow metrics: Using z-scores to estimate deviations from natural flow in the Colorado River below Glen Canyon Dam
River flow patterns are primary drivers of lotic ecosystems, and hundreds of metrics have been developed to quantify flow attributes. Although existing metrics have been a powerful tool in designing environmental flows, they are often developed with specific resources in mind and are rarely directly comparable with each other (i.e., units are often different). Here, we focus on natural...
Authors
Emily C. Palmquist, Bridget Deemer, Anya Metcalfe, Theodore Kennedy, Lucas Bair, Helen C. Fairley, Paul E. Grams, Joel B. Sankey, Charles B. Yackulic
Shallow faulting and folding beneath south‐central Seattle, Washington State, from land‐based high‐resolution seismic‐reflection imaging Shallow faulting and folding beneath south‐central Seattle, Washington State, from land‐based high‐resolution seismic‐reflection imaging
The geologic framework of the Seattle fault zone (SFZ) has been extensively studied, but the structure and fault strand locations in the central portion of the fault zone through the city of Seattle have remained controversial. Much of what is known about the SFZ has come from light detection and ranging (lidar)‐topographic surveys and paleoseismic investigations of fault scarps...
Authors
William J. Stephenson, Jack K. Odum, Thomas L. Pratt
Dopaminergic and anti-estrogenic responses in juvenile steelhead (Oncorhynchus mykiss) exposed to bifenthrin Dopaminergic and anti-estrogenic responses in juvenile steelhead (Oncorhynchus mykiss) exposed to bifenthrin
The frequency of detection and concentrations of bifenthrin, a pyrethroid insecticide, in the waterways inhabited by the endangered species, steelhead trout (Oncorhynchus mykiss), has become a significant concern for regulatory agencies. Endocrine disruption has been observed with estrogenic and anti-estrogenic responses in fish species at different life stages. Since several studies...
Authors
Jason Tyler Magnuson, Nathan D. Sy, Philip Tanabe, Chenyang Ji, Jay Gan, Daniel Schlenk
A literature review and hypsometric analysis to support decisions on trout management flows on the Colorado River downstream from Glen Canyon Dam A literature review and hypsometric analysis to support decisions on trout management flows on the Colorado River downstream from Glen Canyon Dam
Executive Summary Fish stranding has been studied in select rivers worldwide, often with the purpose of determining how to mitigate adverse effects of dam operations on highly valued salmon and trout populations. However, where a reduction in trout population size is desired by resource managers, as is the case downstream of the Glen Canyon Dam on the Colorado River, flow manipulations...
Authors
Mariah Giardina, Josh Korman, Michael D. Yard, Scott Wright, Matthew A. Kaplinski, Glenn Bennett
Assessing the risk of climate maladaptation for Canadian polar bears Assessing the risk of climate maladaptation for Canadian polar bears
The Arctic is warming four times faster than the rest of the world, threatening the persistence of many Arctic species. It is uncertain if Arctic wildlife will have sufficient time to adapt to such rapidly warming environments. We used genetic forecasting to measure the risk of maladaptation to warming temperatures and sea ice loss in polar bears (Ursus maritimus) sampled across the...
Authors
L. Ruth Rivkin, Evan Richardson, Joshua D. Miller, Todd C. Atwood, Steven Baryluk, Erik W. Born, Corey Davis, Marcus Dyck, Evelien de Greef, Kristin L. Laidre, Nick Lunn, Sarah McCarthy-Neumann, Martyn E. Obbard, Megan A. Owen, Nicholas Pilfold, Amelie Roberto-Charro, Oystein Wiig, Aryn Wilder, Colin J Garroway