Publications

This article gives an overview of the heat fluxes between lakes and their environment. The heat budget of most lakes is dominated by heat fluxes at the lake surface, especially shortwave radiation, incoming and outgoing longwave radiation, and the latent heat flux. The seasonality of these fluxes is the most important driver for seasonal mixing processes in lakes. Changes in heat fluxes and the re

This chapter introduces a framework for combining scientific knowledge of physics-based models with neural networks to advance scientific discovery. It explains termed physics-guided neural networks (PGNN), leverages the output of physics-based model simulations along with observational features in a hybrid modeling setup to generate predictions using a neural network architecture. Data science ha

This chapter presents a physics-guided recurrent neural network model (PGRNN) for predicting water temperature in lake systems. Standard machine learning (ML) methods, especially deep learning models, often require a large amount of labeled training samples, which are often not available in scientific problems due to the substantial human labor and material costs associated with data collection. M

To understand the processes affecting the distribution and cycles of particulates, pollutants, nutrients, and organisms in estuaries, it is insufficient to focus solely on the biological and chemical aspects of the processes. Water sources and movements (e.g. evaporation, precipitation, riverine discharge, submarine ground water discharge, wetland hydrology, and tidal exchange) as well as other hy

Locomotion is the act and process of moving from place to place, which is fundamental to the life history of all mobile organisms. While the field of biomechanics encompasses the study of the physical constraints of what animals are capable of, ecological contexts require an integrated view that includes ecology and behavior. This chapter provides an overview of some of the areas where locomotion

No abstract available.

Headwater streams of the Pacific Northwest of North America are home to 52 amphibian species, spanning a diversity of taxa and life histories. Headwater stream-associated amphibians occur both within coldwater-stream channels and throughout adjacent riparian habitat, reflective of the important role of old-growth forests in providing cool, moist microclimates for these sensitive species. Forests o

The Shublik Formation (Middle and Upper Triassic) is a mixed siliciclastic-carbonate-phosphatic unit in northern Alaska. It generated oil found in Prudhoe Bay and other accumulations and is a prospective self-sourced resource play on Alaska’s North Slope. Its distal, deeper-water equivalent—the Otuk Formation—consists largely of radiolarian chert, mudstone, and limestone and contains potential gas

A multiscale perspective is essential for conservation planning of riverine fishes. Coarse-scale habitat (e.g., basis) can influence both finer-scale habitat characteristics (e.g., reaches and microhabitat) and associated species distributions. Finer-scale management and habitat rehabilitation efforts can fail without the consideration of coarser-scale constraints. We provide a conceptual hierarch

In this chapter we provide an overview of some core concepts, describe exponential growth as the basic foundation for understanding population dynamics, and discuss some of the factors that can affect wildlife population dynamics. We then show how management insights that can be gained from analyzing the dynamics of individual age or stage classes, examine dynamics of multiple populations across a

No abstract available.

Ceratocystis lukuohia and Ceratocystis huliohia are two newly recognized fungi that have arrived in Hawai‘i and are causing a serious vascular wilt and canker disease, respectively, of ‘ōhi‘a trees (Metrosideros polymorpha), the most common and important tree species in Hawai‘i. Management of these diseases has presented challenges due to unique etiological aspects and the exceptionally pathogenic