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Publications

Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

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Identification of supraoptimal temperatures in juvenile blueback herring (Alosa aestivalis) using survival, growth rate and scaled energy reserves Identification of supraoptimal temperatures in juvenile blueback herring (Alosa aestivalis) using survival, growth rate and scaled energy reserves

For young fishes, growth of somatic tissues and energy reserves are critical steps for survival and progressing to subsequent life stages. When thermal regimes become supraoptimal, routine metabolic rates increase and leave less energy for young fish to maintain fitness-based activities and, in the case of anadromous fishes, less energy to prepare for emigration to coastal habitats. Thus
Authors
Lian Guo, Adrian Jordaan, Eric T. Schultz, Stephen D. McCormick

Central Andean (28–34°S) flood record 0–25 ka from Salinas del Bebedero, Argentina Central Andean (28–34°S) flood record 0–25 ka from Salinas del Bebedero, Argentina

The Salinas del Bebedero occupies an isolated basin in the foreland of central Argentina at 33°S and was flooded repeatedly over past 25 ka. Isotopic evidence demonstrates that this flooding was due to overflow of the nearby Río Desaguadero with waters derived from the distant (≥300 km) central Andes between 28–34°S. Stratigraphic and shoreline evidence shows that floods occurred most...
Authors
Jay Quade, Elad Dente, Allison Cartwright, Adam M. Hudson, Sebastian Jimenez, David McGee

Integrated hydrologic model development and postprocessing for GSFLOW using pyGSFLOW Integrated hydrologic model development and postprocessing for GSFLOW using pyGSFLOW

pyGSFLOW is a python package designed to create new GSFLOW integrated hydrologic models, read existing models, edit model input data, run GSFLOW models, process output, and visualize model data.
Authors
Joshua Larsen, Ayman H. Alzraiee, Richard G. Niswonger

Population viability analysis for a pond-breeding amphibian under future drought scenarios in the southeastern United States Population viability analysis for a pond-breeding amphibian under future drought scenarios in the southeastern United States

Climate change effects are contributing to widespread declines of amphibians, and pond-breeding species may be particularly sensitive to future drought conditions that restrict wetland hydroperiods and decrease opportunities for successful breeding and recruitment. Pond-breeding amphibian populations can compensate for periodic droughts via episodic booms in recruitment, but studies...
Authors
Brian A. Crawford, John C. Maerz, Vanessa C. K. Terrell, Clinton T. Moore

Pre-breeding foraging ecology of three tern species nesting in the Gulf of Maine Pre-breeding foraging ecology of three tern species nesting in the Gulf of Maine

A variety of seabird species migrate annually from wintering grounds in the Southern Hemisphere to the Gulf of Maine, USA to breed and raise their young. Post-migration, adult seabirds depend on the spatio-temporal match of reliable food resources to replenish energy reserves before breeding. However, the conditions during this critical window of time are becoming increasingly uncertain...
Authors
Rachel M. Bratton, Henry Legett, Paula Shannon, Keenan Yakola, Alexander R. Gerson, Michelle Staudinger

Range-wide persistence of the endangered arroyo toad (Anaxyrus californicus) for 20+ years following a prolonged drought Range-wide persistence of the endangered arroyo toad (Anaxyrus californicus) for 20+ years following a prolonged drought

Prolonged drought due to climate change has negatively impacted amphibians in southern California, U.S.A. Due to the severity and length of the current drought, agencies and researchers had growing concern for the persistence of the arroyo toad (Anaxyrus californicus), an endangered endemic amphibian in this region. Range-wide surveys for this species had not been conducted for at least...
Authors
Cynthia Joan Hitchcock, Elizabeth Gallegos, Adam R. Backlin, Russell Barabe, Peter H. Bloom, Kimberly Boss, Cheryl S. Brehme, Christopher W. Brown, Denise Clark, Elizabeth R. Clark, Kevin Cooper, Julie Donnell, Edward L Ervin, Peter Famolaro, Kim M. Guilliam, Jaquelyn Hancock, Nicholas Hess, Steven Howard, Valerie Hubbartt, Patrick Lieske, Robert E. Lovich, Tritia Matsuda, Katherin Meyer-Wilkins, Kamarul Muri, Barry Nerhus, Jeffrey A. Nordland, Brock Ortega, Robert Packard, Ruben Ramirez, Sam C. Stewart, Samuel Sweet, Manna L. Warburton, Jeffrey Wells, Ryan Winkleman, Kirsten Winter, Brian Zitt, Robert N. Fisher

Sensitivity of headwater streamflow to thawing permafrost and vegetation change in a warming Arctic Sensitivity of headwater streamflow to thawing permafrost and vegetation change in a warming Arctic

Climate change has the potential to impact headwater streams in the Arctic by thawing permafrost and subsequently altering hydrologic regimes and vegetation distribution, physiognomy and productivity. Permafrost thaw and increased subsurface flow have been inferred from the chemistry of large rivers, but there is limited empirical evidence of the impacts to headwater streams. Here we...
Authors
Joshua C. Koch, Ylva Sjoberg, Jonathan A. O’Donnell, Michael P. Carey, Pamela Sullivan, A. Terskaia

2022 Crustal Deformation Modeling Workshop Report 2022 Crustal Deformation Modeling Workshop Report

The 2022 Crustal Deformation Modeling Workshop was held June 20–24 at the Colorado School of Mines in Golden, Colorado. The workshop included two days of tutorials on the use of the open-source software PyLith for crustal deformation modeling followed by three days of science talks and discussions. The workshop focused on three primary themes: (1) Earthquake cycle modeling; (2)...
Authors
Brad T. Aagaard, Sylvain Barbot, Brittany Erickson, Matthew Knepley, Mark Simons, Charles Williams

Improving the Development Pipelines for USGS Earthquake Hazards Program Real-Time and Scenario Products Improving the Development Pipelines for USGS Earthquake Hazards Program Real-Time and Scenario Products

The real-time and scenario products of the U.S. Geological Survey (USGS) Earthquake Hazards Program, such as the ComCat catalog, Did You Feel It?, ShakeMap, ShakeCast, and PAGER, are highly visible and used by a wide variety of stakeholders. We propose two significant enhancements to the development pipelines for the Earthquake Hazards Program real-time and scenario products that have...
Authors
Brad T. Aagaard, David J. Wald, Eric M. Thompson, Mike Hearne, Lisa Sue Schleicher

The economic effects of the HayWired Scenario using the association of Bay Area governments regional growth forecast—A focus on network disruption and resilience The economic effects of the HayWired Scenario using the association of Bay Area governments regional growth forecast—A focus on network disruption and resilience

This paper describes how impacts to infrastructure networks within the San Francisco Bay Area may exacerbate the effects of building damage and how policies addressing these networks can improve resilience before and after the earthquake. The analysis uses existing modeling techniques that underlie the Association of Bay Area Government’s (ABAG) 2015 regional economic forecast of the San...
Authors
Cynthia Kroll, Bobby Lu, Anne Wein, Aksel Olsen

Methanogenic archaea in subsurface coal seams are biogeographically distinct: An analysis of metagenomically-derived mcrA sequences Methanogenic archaea in subsurface coal seams are biogeographically distinct: An analysis of metagenomically-derived mcrA sequences

The production of methane as an end-product of organic matter degradation in the absence of other terminal electron acceptors is common, and has often been studied in environments such as animal guts, soils, and wetlands due to its potency as a greenhouse gas. To date however, the study of the biogeographic distribution of methanogens across coal seam environments has been minimal. Here...
Authors
Bronwyn C Campbell, Paul Greenfield, Gong, Elliott P. Barnhart, David J. Midgley, Ian T. Paulsen, Simon C. George

Extreme rainstorms drive exceptional organic carbon export from forested humid-tropical rivers in Puerto Rico Extreme rainstorms drive exceptional organic carbon export from forested humid-tropical rivers in Puerto Rico

Extreme rainfall events in the humid-tropical Luquillo Mountains, Puerto Rico export the bulk of suspended sediment and particulate organic carbon. Using 25 years of river carbon and suspended sediment data, which targeted hurricanes and other large rainstorms, we estimated biogenic particulate organic carbon yields of 65 ± 16 tC km−2 yr−1 for the Icacos and 17.7 ± 5.1 tC km−2 yr−1 for...
Authors
Kasey E. Clark, Robert Stallard, Sheila F. Murphy, Martha A. Scholl, Grizelle Gonzalez, Alain F. Plante, William H. McDowell
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