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Publications

Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

Filter Total Items: 176955

Epigenetics in captivity: Restoring wild phenotypes in captive-reared salmonids Epigenetics in captivity: Restoring wild phenotypes in captive-reared salmonids

Captive rearing is a common practice for the stocking, conservation, and supplementation of fish species worldwide, but captive-reared fish can exhibit altered phenotypes leading to reduced fitness in nature compared to wild conspecifics. In salmonids, certain studies have found limited genetic differentiation between wild and captive-reared fish. However, documented changes in gene...
Authors
Tia Attfield, Andrew Edgar Honsey, Amanda Susanne Ackiss, Andreas Luek, Brian Meagher, Hayley Nuetzel, Ilana Koch, Julien April, Kristy Wakeling, Kyle Wellband, Raphael Bouchard, Sarah J. Lehnhert, Shawn R. Narum, Timothy Healy, Trevor E. Pitcher, Clare J. Venney

Evidence for organic and igneous carbon sources in the Mesoproterozoic Adirondack Highlands graphite district, New York Evidence for organic and igneous carbon sources in the Mesoproterozoic Adirondack Highlands graphite district, New York

This study examined the origin of graphite mineralization in the Mesoproterozoic Adirondack Highlands. Flake graphite was mined from the historic mining district around Ticonderoga, New York, USA, from the 1850s to the 1920s. Most of the production and reserves from the district are disseminated graphite from feldspathic quartz schists (e.g., Dixon-American Graphite Co. mine, Faxon...
Authors
William H. Peck, Jade Star Lackey, Gregory J. Walsh, Katia A. Childs, Matthew C. King, Fredrick S. LeClair, Jacob L. Steinberg

Modeling species co-occurrence effects to inform invasive barred owl management and recovery of the northern spotted owl Modeling species co-occurrence effects to inform invasive barred owl management and recovery of the northern spotted owl

Robust estimation of wildlife populations represents a cornerstone of wildlife research and provides critical information to guide management, including identifying at-risk species, setting harvest rates, and evaluating predator and invasive species control programs. Efforts to enhance population estimation have long included influences one species may have on another, beginning with...
Authors
Vaibhava Srivastava, Nicholas J. Van Lanen, Rana D. Parshad

Interspecific brood parasitism of a greater sage-grouse brood by chukar in Nevada Interspecific brood parasitism of a greater sage-grouse brood by chukar in Nevada

Greater sage-grouse (Centrocercus urophasianus; hereafter, sage-grouse) populations have declined across their range, resulting in high conservation concerns among state and federal wildlife managers. While interspecific nest parasitism by chukar (Alectoris chukar) on sage-grouse nests has been observed previously, the parasitic effects benefiting or harming the reproduction of either...
Authors
Belle Joy-Lynn Malley, McCoy R. Meshach, Steven R. Mathews, Peter S. Coates

ECCOE Landsat quarterly calibration and validation report—Quarter 3, 2025 ECCOE Landsat quarterly calibration and validation report—Quarter 3, 2025

Authors
Md Obaidul Haque, Nahid Hasan, Ashish Shrestha, Rajagopalan Rengarajan, Mark Lubke, Daniel Steinwand, Paul Bresnahan, Jerad L. Shaw, Kathryn Ruslander, Esad Micijevic, Michael J. Choate, Cody Anderson, Jeff Clauson, Kurt Thome, Amit Angal, Raviv Levy, Jeff Miller, Leibo Ding, Cibele Teixeira Pinto

Edible baits for systemic flea control, plague mitigation, and wildlife conservation: Evaluation of four active ingredients with three rodent species in western North America Edible baits for systemic flea control, plague mitigation, and wildlife conservation: Evaluation of four active ingredients with three rodent species in western North America

The flea-borne agent of plague, Yersinia pestis, is lethal to endangered black-footed ferrets (Mustela nigripes, BFFs) and the prairie dogs (Cynomys spp., PDs) on which BFFs depend for habitat and prey. We developed bait pellets containing insecticides for flea control with PDs. Individual baits contained 0.46, 0.91, 1.21, or 1.52 mg fipronil, 5.40 mg afoxolaner, 50.62 mg fluralaner, or...
Authors
David A. Eads, Marc R. Matchett, Magnus McCaffery, Ashlyn Hemmah, Angela R. Jarding, Jennifer Cordova, Heather Heimann, Stefano Liccioli, Laura E. Gardiner, Jordan Cormack, Holly Hicks, Jason Fly, Eddie Childers, Travis M. Livieri, Michelle L. Hladik, Dean E. Biggins

Spatial units to support Lake Erie Cisco Coregonus artedi restoration Spatial units to support Lake Erie Cisco Coregonus artedi restoration

At the request of the Lake Erie Committee, spatial units for Lake Erie Cisco were delineated during spring 2024. Spatial units correspond to the reproductive habitat of extirpated (unoccupied spatial units) and extant (occupied spatial units) populations. Spatial units were delineated using a Council of Lake Committees-endorsed method that involves synthesizing data for evaluation by a...
Authors
Joshua P. Egan, Amanda Susanne Ackiss, Andrew M. Muir

Estimation of parental abundance using hierarchical Bayesian modeling with data augmentation Estimation of parental abundance using hierarchical Bayesian modeling with data augmentation

Pedigree-based estimation methods leverage the fact that each offspring in a cohort is genotypically “marked” by its parents and represent a recent and promising toolset for estimating population dynamics. This includes pedigree accumulation estimators that model the “accumulation” of inferred unique parents within a given cohort to estimate parental abundance. Unlike close-kin mark...
Authors
Benjamin Marcy-Quay, Nicholas M. Sard

Orientation dependence of probabilistic seismic hazard estimates from CyberShake physics-based simulations Orientation dependence of probabilistic seismic hazard estimates from CyberShake physics-based simulations

Earthquake ground‐motion intensities, such as pseudospectral accelerations (SAs), can vary significantly with horizontal orientation. However, conducting probabilistic seismic hazard analysis (PSHA) for each horizontal orientation is challenging because current ground‐motion models used in PSHA consider only a single horizontal intensity value, usually the median across all orientations...
Authors
Alan John Poulos, Evan Tyler Hirakawa, Grace Alexandra Parker, Annemarie S. Baltay

Surface-wave relocation and characterization of the 2024–2025 dyking episode along the Fentale–Dofen segment of the Ethiopian rift Surface-wave relocation and characterization of the 2024–2025 dyking episode along the Fentale–Dofen segment of the Ethiopian rift

From late-December 2024 to mid-March 2025, a 50-km-long dyke intrusion triggered over 300 earthquakes (magnitude 4 to 5.9) between Fentale and Dofen volcanoes along the Northern Main Ethiopian Rift. Dyke intrusions periodically occur along the Fentale–Dofen magmatic segment and are an expression of ongoing rift extension. Preliminary analyses using interferometric synthetic aperture...
Authors
Chanel A. Deane, Jeremy D. Pesicek, Marco Bagnardi, David R. Shelly, Stephanie G. Prejean, William L. Yeck, Paul S. Earle

The effects of scientific uncertainty and values trade-offs on flow management decisions for an endangered fish The effects of scientific uncertainty and values trade-offs on flow management decisions for an endangered fish

Consumptive use of freshwater is of concern in many estuarine ecosystems, and various frameworks have been used to prescribe environmental flows to benefit native species. However, few of these frameworks explicitly examine the potential trade-offs between socioeconomic and conservation-oriented values. This is exemplified in California, USA, where freshwater management has been an area...
Authors
Brian Mahardja, William E. Smith, Brian D. Healy, Cameron Koizumi, Matthew L. Nobriga, Shawn Acuña, Brian A. Crawford, Kristin K. Arend, Michael C. Runge

Assessment of undiscovered conventional oil and gas resources of South America and the Caribbean, 2025 Assessment of undiscovered conventional oil and gas resources of South America and the Caribbean, 2025

Using a geology-based assessment methodology, the U.S. Geological Survey estimated undiscovered, technically recoverable mean conventional resources of 37.6 billion barrels of oil and 281.6 trillion cubic feet of gas in 31 geologic provinces of South America and the Caribbean.
Authors
Christopher J. Schenk, Tracey J. Mercier, Phuong A. Le, Andrea D. Cicero, Sarah E. Gelman, Jane S. Hearon, Benjamin G. Johnson, Jenny H. Lagesse, Heidi M. Leathers-Miller
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