Alfredo Aretxabaleta, PhD
My research mainly focuses in processes controlling water level in coastal environments including tidal effects, storm events, and sea level rise. Another important focus is the investigation of the problems related to sediment transport, especially during storm events, that can affect the redistribution of sediment.
Biography
I have a B.S. degree in Marine Sciences (1998) from the Universidad de Las Palmas de Gran Canaria (ULPGC) and a Ph.D. in Marine Sciences (Physical Oceanography) from UNC Chapel Hill (2005). I worked as a post-doctoral research fellow at the Department of Marine Sciences at UNC Chapel Hill, at the Woods Hole Oceanographic Institution (AOPE), and at the Instituto de Ciencias del Mar - CSIC in Barcelona, Spain. I worked as a scientific programmer contractor at U.S. Geological Survey Woods Hole Coastal and Marine Science Center (WHCMSC) until 2016. Now, I am an oceanographer at the WHCMSC.
Publications
- Sherwood, C.R., Aretxabaleta, A.L., Harris, C.K., Rinehimer, J.P., Verney, R. and Ferré, B., 2018. Cohesive and mixed sediment in the Regional Ocean Modeling System (ROMS v3. 6) implemented in the Coupled Ocean-Atmosphere-Wave-Sediment Transport Modeling System (COAWST r1234). Geoscientific Model Development, 11(5), pp.1849-1871.
- Kalra, T.S., Aretxabaleta, A., Seshadri, P., Ganju, N.K. and Beudin, A., 2017. Sensitivity analysis of a coupled hydrodynamic-vegetation model using the effectively subsampled quadratures method (ESQM v5. 2). Geoscientific Model Development, 10, pp.4511-4523.
- Beudin, A., Ganju, N.K., Defne, Z. and Aretxabaleta, A.L., 2017. Physical response of a back‐barrier estuary to a post‐tropical cyclone. Journal of Geophysical Research: Oceans, 122(7), pp.5888-5904.
- Aretxabaleta, A.L., Ganju, N.K., Butman, B. and Signell, R.P., 2017. Observations and a linear model of water level in an interconnected inlet‐bay system. Journal of Geophysical Research: Oceans, 122(4), pp.2760-2780.
- Ganju, N.K., Brush, M.J., Rashleigh, B., Aretxabaleta, A.L., Del Barrio, P., Grear, J.S., Harris, L.A., Lake, S.J., McCardell, G., O’Donnell, J. and Ralston, D.K., 2016. Progress and challenges in coupled hydrodynamic-ecological estuarine modeling. Estuaries and coasts, 39(2), pp.311-332.
- Defne, Z., Ganju, N.K. and Aretxabaleta, A., 2016. Estimating time‐dependent connectivity in marine systems. Geophysical Research Letters, 43(3), pp.1193-1201.
- Grifoll, M., Aretxabaleta, A.L. and Espino, M., 2015. Shelf response to intense offshore wind. Journal of Geophysical Research: Oceans, 120(9), pp.6564-6580.
- del Barrio, P., Ganju, N., Aretxabaleta, A., Hayn, M., Garcia, A., and Howarth, R., Modeling Future Scenarios of Light Attenuation and Potential Seagrass Success in a Eutrophic Estuary: Estuaries and Coasts, v. 149:,13–23, doi:10.1016/j.ecss.2014.07.005, 2014.
- Aretxabaleta, A. L., Butman, B., Signell, R. P., Dalyander, P. S., Sherwood, C. R., Sheremet, V. A., McGillicuddy, D. J., Near-bottom circulation and dispersion of sediment containing Alexandrium fundyense cysts in the Gulf of Maine during 2010-2011. Deep-Sea Research II,, 103, 96-111, do1:10.1016/j.dsr2.2013.11.003, 2014.
- Grifol, M., Cracia, V., Aretxabaleta, A., Guillen, J., Espino, M., and Warner, J., Formation of fine sediment deposit from a flash-flood river in the Mediterranean Sea: Journal of Geophysical Research, 119, 5837–5853, doi:10.1002/2014JC010187, 2014.
- Lough, R. G., Aretxabaleta, A. L. Transport and retention of vertically migrating adult mysid and decapod shrimp in the tidal front on Georges Bank. Marine Ecology Progress Series, 514, 119–135, doi:10.3354/meps10977, 2014.
- Butman, B., Aretxabaleta, A. L., Dickhudt, P. J., Dalyander, P. S., Sherwood, C. R., Anderson, D. M., Keafer, B. A., Signell, R. P., Investigating the importance of sediment resuspension in Alexandrium fundyense cyst population dynamics in the Gulf of Maine. Deep-Sea Research II,, 103, 79-95, doi:10.1016/j.dsr2.2013.10.011, 2014.
- Aretxabaleta, A. L., B. Butman, and N. K. Ganju, Water level response in back-barrier bays unchanged following Hurricane Sandy, Geophys. Res. Lett., 41, doi:10.1002/2014GL059957, 2014.
- Ganju, N., Aretxabaleta, A., and Miselis, J., Physical and biogeochemical controls on light attenuation in a eutrophic, back-barrier estuary: Biogeosciencess, 11(24), 7193-7205, doi:10.5194/bgd-11-12183-2014, 2014.
- Grifoll, M., A. L. Aretxabaleta, J. L. Pelegri, M. Espino, J. C. Warner, A. Sanchez-Arcilla. Seasonal circulation over the Catalan inner-shelf (Northwest Mediterranean Sea), J. Geophys. Res., doi:10.1002/jgrc.20403, 2013.
- Aretxabaleta, A. L., K. W. Smith, Multi-regime non-Gaussian data filling for incomplete ocean datasets. J. Marine Syst., 119-120 , 11-18, doi:10.1016/j.jmarsys.2013.03.001, 2013.
Science and Products
Coastal System Change at Fire Island, New York
Fire Island is a 50-km long barrier island along the south shore of Long Island, New York. The island is comprised of seventeen year-round communities; federal, state, and county parks; and supports distinct ecosystems alongside areas of economic and cultural value. In addition to providing resources to its residents, the barrier island also protects the heavily-populated mainland from storm...
Back-barrier and Estuarine - Coastal System Change at Fire Island, New York
Regional-scale modeling forecasts how atmospheric forcing and oceanographic circulation influence estuarine circulation and water levels, sediment transport, and wetland change.
Estuarine Processes, Hazards, and Ecosystems
Estuarine processes, hazards, and ecosystems describes several interdisciplinary projects that aim to quantify and understand estuarine processes through observations and numerical modeling. Both the spatial and temporal scales of these mechanisms are important, and therefore require modern instrumentation and state-of-the-art hydrodynamic models. These projects are led from the U.S....
Coastal Model Applications and Field Measurements
Numerical models are used by scientists, engineers, coastal managers, and the public to understand and predict processes in the coastal ocean. This project supports the development and application of open-source coastal models and has several objectives: 1) improve the code of numerical sediment-transport models by implementing new or improved algorithms; 2) obtain measurements of coastal...
Estuarine Processes Eutrophication
Increased loadings of nutrients to estuaries have altered ecosystem function by encouraging growth of phytoplankton and macroalgae while inducing large swings in dissolved oxygen and threatening the sustainability of seagrass meadows. We are measuring and modeling these processes to understand the future trajectory of estuarine ecosystems.
Estuarine Processes Coastal Hazards
Extreme tides and coastal storms transfer high water levels to estuaries through natural and managed entrances. The size of the transfer depends on the duration of the event and the geomorphology of the estuary. We use observational data and modeling scenarios to understand and spatially map this transfer at our study sites.
Estuarine Processes Model Development
We are developing new routines within the COAWST model framework to represent coupled bio-physical processes in estuarine and coastal regions. These include routines for marsh vulnerability to waves, estuarine biogeochemistry, and feedbacks between aquatic vegetation and hydrodynamics.
A geospatially resolved wetland vulnerability index: Synthesis of physical drivers
Assessing wetland vulnerability to chronic and episodic physical drivers is fundamental for establishing restoration priorities. We synthesized multiple data sets from E.B Forsythe National Wildlife Refuge, New Jersey, to establish a wetland vulnerability metric that integrates a range of physical processes, regulatory information and physical/...
Defne, Zafer; Aretxabaleta, Alfredo; Ganju, Neil Kamal; Kalra, Tarandeep S.; Jones, Daniel K.; Smith, Kathryn E.L. Spatial distribution of water level impact to back-barrier bays
Water level in semi-enclosed bays, landward of barrier islands, is mainly driven by offshore sea level fluctuations that are modulated by bay geometry and bathymetry, causing spatial variability in the ensuing response (transfer). Local wind setup can have a secondary role that depends on wind speed, fetch, and relative orientation of the wind...
Aretxabaleta, Alfredo; Ganju, Neil Kamal; Defne, Zafer; Signell, Richard P. Physical response of a back-barrier estuary to a post-tropical cyclone
This paper presents a modeling investigation of the hydrodynamic and sediment transport response of Chincoteague Bay (VA/MD, USA) to Hurricane Sandy using the Coupled Ocean-Atmosphere-Wave-Sediment-Transport (COAWST) modeling system. Several simulation scenarios with different combinations of remote and local forces were conducted to identify the...
Beudin, Alexis; Ganju, Neil Kamal; Defne, Zafer; Aretxabaleta, Alfredo Sensitivity analysis of a coupled hydrodynamic-vegetation model using the effectively subsampled quadratures method
Coastal hydrodynamics can be greatly affected by the presence of submerged aquatic vegetation. The effect of vegetation has been incorporated into the Coupled-Ocean-Atmosphere-Wave-Sediment Transport (COAWST) Modeling System. The vegetation implementation includes the plant-induced three-dimensional drag, in-canopy wave-induced streaming, and the...
Kalra, Tarandeep S.; Aretxabaleta, Alfredo; Seshadri, Pranay; Ganju, Neil K.; Beudin, Alexis Observations and a linear model of water level in an interconnected inlet-bay system
A system of barrier islands and back-barrier bays occurs along southern Long Island, New York, and in many coastal areas worldwide. Characterizing the bay physical response to water level fluctuations is needed to understand flooding during extreme events and evaluate their relation to geomorphological changes. Offshore sea level is one of the...
Aretxabaleta, Alfredo; Ganju, Neil K.; Butman, Bradford; Signell, Richard P. Progress and challenges in coupled hydrodynamic-ecological estuarine modeling
Numerical modeling has emerged over the last several decades as a widely accepted tool for investigations in environmental sciences. In estuarine research, hydrodynamic and ecological models have moved along parallel tracks with regard to complexity, refinement, computational power, and incorporation of uncertainty. Coupled hydrodynamic-ecological...
Ganju, Neil K.; Brush, Mark J.; Rashleigh, Brenda; Aretxabaleta, Alfredo L.; del Barrio, Pilar; Grear, Jason S.; Harris, Lora A.; Lake, Samuel J.; McCardell, Grant; O'Donnell, James; Ralston, David K.; Signell, Richard P.; Testa, Jeremy; Vaudrey, Jamie M. P. Estimating time-dependent connectivity in marine systems
Hydrodynamic connectivity describes the sources and destinations of water parcels within a domain over a given time. When combined with biological models, it can be a powerful concept to explain the patterns of constituent dispersal within marine ecosystems. However, providing connectivity metrics for a given domain is a three-dimensional problem...
Defne, Zafer; Ganju, Neil K.; Aretxabaleta, Alfredo Physical and biogeochemical controls on light attenuation in a eutrophic, back-barrier estuary
Light attenuation is a critical parameter governing the ecological function of shallow estuaries. In these systems primary production is often dominated by benthic macroalgae and seagrass; thus light penetration to the bed is of primary importance. We quantified light attenuation in three seagrass meadows in Barnegat Bay, New Jersey, a shallow...
Ganju, Neil K.; Miselis, Jennifer L.; Aretxabaleta, Alfredo L. Formation of fine sediment deposit from a flash flood river in the Mediterranean Sea
We identify the mechanisms controlling fine deposits on the inner-shelf in front of the Besòs River, in the northwestern Mediterranean Sea. This river is characterized by a flash flood regime discharging large amounts of water (more than 20 times the mean water discharge) and sediment in very short periods lasting from hours to few days. Numerical...
Grifoll, Manel; Gracia, Vicenç; Aretxabaleta, Alfredo L.; Guillén, Jorge; Espino, Manuel; Warner, John C. Modeling future scenarios of light attenuation and potential seagrass success in a eutrophic estuary
Estuarine eutrophication has led to numerous ecological changes, including loss of seagrass beds. One potential cause of these losses is a reduction in light availability due to increased attenuation by phytoplankton. Future sea level rise will also tend to reduce light penetration and modify seagrass habitat. In the present study, we integrate a...
del Barrio, Pilar; Ganju, Neil K.; Aretxabaleta, Alfredo L.; Hayn, Melanie; García, Andrés; Howarth, Robert W. Transport and retention of vertically migrating adult mysid and decapod shrimp in the tidal front on Georges Bank
Vertical profiles of the adult epibenthic shrimp Neomysis americana and Crangon septemspinosus obtained during June 1985 were used to simulate possible rates of ascent from bottom (40 to 50 m) to near surface at night and return by day, and the consequence of these rates on their horizontal distribution. Numerical particles were released at the...
Lough, R. Gregory; Aretxabaleta, Alfredo L.
Coupled-Ocean-Atmosphere-Wave-Sediment Transport (COAWST) Modeling System
The Coupled-Ocean-Atmosphere-Wave-Sediment Transport (COAWST) Modeling System is an agglomeration of open-source modeling components that has been tailored to investigate coupled processes of the atmosphere, ocean, and waves in the coastal ocean.
Hurricane Sandy Impacts Did Not Contribute to Subsequent Storm Flooding
Flooding in coastal areas bordering Great South Bay, N.Y. and Barnegat Bay, N.J. caused by winter storms that occurred following Hurricane Sandy was not influenced by changes Sandy made to barrier islands or other bay features, according to a new U.S. Geological Survey study.