High water mark sign at Yellowstone River at Carters Bridge
Elliott Barnhart
Elliott Barnhart is a research hydrologist (microbiologist) at the Wyoming Montana Water Science Center in Helena, Montana.
His research focuses on (1) understanding how subsurface microorganisms generate and consume methane, (2) developing and testing new DNA sampling and analytical equipment, and (3) investigating the prevalence of microorganisms, pathogens and invasive species in different ecosystems.
Science and Products
READI-Net: Providing Tools for the Early Detection and Management of Aquatic Invasive Species
The USGS has developed the Rapid environmental (e)DNA Assessment and Deployment Initiative & Network (READI-Net) to accelerate the implementation of environmental DNA (eDNA) analysis as a best practice for the early detection of aquatic biological threats. READI-Net provides tools and a strategy to collect and deliver early detection data for natural resource managers and public health protection...
By
Ecosystems Mission Area, Biological Threats and Invasive Species Research Program, Columbia Environmental Research Center, Eastern Ecological Science Center, Forest and Rangeland Ecosystem Science Center, New York Water Science Center, Northern Rocky Mountain Science Center, Upper Midwest Environmental Sciences Center, Wetland and Aquatic Research Center , Wyoming-Montana Water Science Center, Pacific Northwest Environmental DNA Laboratory
Environmental DNA (eDNA): Combining Technology and Biology to Detect Aquatic Invasive Species and Pathogens
Using DNA, USGS researchers are able to detect the presence of invasive species in aquatic ecosystems. The DNA they use is literally floating around in the environment and is called environmental DNA (eDNA) and is a powerful tool for the early detection of invasive species and pathogens, which can cause serious ecological and economic damage. USGS researchers are also combining the use of eDNA...
Using Robots in the River: Biosurveillance at USGS streamgages
For more than a decade, researchers around the world have shown that sampling a water body and analyzing for DNA (a method known as eDNA) is an effective method to detect an organism in the water. The challenge is that finding organisms that are not very abundant requires a lot of samples to locate this needle in a haystack. Enter the "lab in a can", the water quality sampling and processing robot...
High-Resolution, Interagency Biosurveillance of Threatened Surface Waters in the United States
Advances in information technology now provide large volume, high-frequency data collection which may improve real-time biosurveillance and forecasting. But, big data streams present challenges for data management and timely analysis. As a first step in creating a data science pipeline for translating large datasets into meaningful interpretations, we created a cloud-hosted PostgreSQL database tha
Occurrence of pathogen Naegleria fowleri in northwestern Wyoming hot springs
Naegleria fowleri ( N. fowleri ) commonly referred to as the "brain-eating amoeba", is a thermophilic free-living amoeba found in warm and hot surface water that include freshwater ponds, lakes, rivers, and hot springs (Yoder and others. 2010).
Microbial Methanogenesis and Strategies for Enhancements
Microbial (biogenic) natural gas is present in shale, coal and petroleum reservoirs and is estimated to account for 20% of the world’s natural gas resources. We provide hydrological, geochemical and microbial information related to the production of biogenic natural gas and new methods to monitor and enhance the production of this energy resource. Generating microbial methane at a faster rate from...
High water mark sign at Yellowstone River at Carters Bridge
High water mark sign at Yellowstone River at Carters Bridge
Testing the feasibility of real-time eDNA monitoring
Elk are not concerned with our work. USGS and the Monterey Bay Aquarium Research Institute conducted tests of the feasibility of real-time eDNA monitoring at USGS streamgage 06190540 Boiling River at Mammoth,YNP, September 13, 2017.
Elk are not concerned with our work. USGS and the Monterey Bay Aquarium Research Institute conducted tests of the feasibility of real-time eDNA monitoring at USGS streamgage 06190540 Boiling River at Mammoth,YNP, September 13, 2017.
Collecting a sample for detection of N. fowleri
Collecting a sample for detection of N. fowleri in a Teton County hot spring
Collecting a sample for detection of N. fowleri in a Teton County hot spring
Science and Products
READI-Net: Providing Tools for the Early Detection and Management of Aquatic Invasive Species
The USGS has developed the Rapid environmental (e)DNA Assessment and Deployment Initiative & Network (READI-Net) to accelerate the implementation of environmental DNA (eDNA) analysis as a best practice for the early detection of aquatic biological threats. READI-Net provides tools and a strategy to collect and deliver early detection data for natural resource managers and public health protection...
By
Ecosystems Mission Area, Biological Threats and Invasive Species Research Program, Columbia Environmental Research Center, Eastern Ecological Science Center, Forest and Rangeland Ecosystem Science Center, New York Water Science Center, Northern Rocky Mountain Science Center, Upper Midwest Environmental Sciences Center, Wetland and Aquatic Research Center , Wyoming-Montana Water Science Center, Pacific Northwest Environmental DNA Laboratory
Environmental DNA (eDNA): Combining Technology and Biology to Detect Aquatic Invasive Species and Pathogens
Using DNA, USGS researchers are able to detect the presence of invasive species in aquatic ecosystems. The DNA they use is literally floating around in the environment and is called environmental DNA (eDNA) and is a powerful tool for the early detection of invasive species and pathogens, which can cause serious ecological and economic damage. USGS researchers are also combining the use of eDNA...
Using Robots in the River: Biosurveillance at USGS streamgages
For more than a decade, researchers around the world have shown that sampling a water body and analyzing for DNA (a method known as eDNA) is an effective method to detect an organism in the water. The challenge is that finding organisms that are not very abundant requires a lot of samples to locate this needle in a haystack. Enter the "lab in a can", the water quality sampling and processing robot...
High-Resolution, Interagency Biosurveillance of Threatened Surface Waters in the United States
Advances in information technology now provide large volume, high-frequency data collection which may improve real-time biosurveillance and forecasting. But, big data streams present challenges for data management and timely analysis. As a first step in creating a data science pipeline for translating large datasets into meaningful interpretations, we created a cloud-hosted PostgreSQL database tha
Occurrence of pathogen Naegleria fowleri in northwestern Wyoming hot springs
Naegleria fowleri ( N. fowleri ) commonly referred to as the "brain-eating amoeba", is a thermophilic free-living amoeba found in warm and hot surface water that include freshwater ponds, lakes, rivers, and hot springs (Yoder and others. 2010).
Microbial Methanogenesis and Strategies for Enhancements
Microbial (biogenic) natural gas is present in shale, coal and petroleum reservoirs and is estimated to account for 20% of the world’s natural gas resources. We provide hydrological, geochemical and microbial information related to the production of biogenic natural gas and new methods to monitor and enhance the production of this energy resource. Generating microbial methane at a faster rate from...
High water mark sign at Yellowstone River at Carters Bridge
High water mark sign at Yellowstone River at Carters Bridge
High water mark sign at Yellowstone River at Carters Bridge
Testing the feasibility of real-time eDNA monitoring
Elk are not concerned with our work. USGS and the Monterey Bay Aquarium Research Institute conducted tests of the feasibility of real-time eDNA monitoring at USGS streamgage 06190540 Boiling River at Mammoth,YNP, September 13, 2017.
Elk are not concerned with our work. USGS and the Monterey Bay Aquarium Research Institute conducted tests of the feasibility of real-time eDNA monitoring at USGS streamgage 06190540 Boiling River at Mammoth,YNP, September 13, 2017.
Collecting a sample for detection of N. fowleri
Collecting a sample for detection of N. fowleri in a Teton County hot spring
Collecting a sample for detection of N. fowleri in a Teton County hot spring