Wildlife Disease and Environmental Health in Alaska
Science Center Objects
Environmental health is defined by connections between the physical environment, ecological health, and human health. Current research within the U.S. Geological Survey (USGS) recognizes the importance of this integrated research philosophy, which includes study of disease and pollutants as they pertain to both wildlife and humans. Due to its key geographic location and significant wildlife resources, Alaska is a critical area for future study of environmental health.
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Avian Influenza Research
Since 2006, the USGS Alaska Science Center has been part of the State and Federal interagency team for the detection and response to highly pathogenic (HPAI) viruses in North America. Avian influenza or "bird flu" is a viral disease that primarily infects domestic poultry and wild birds. Avian influenza viruses are naturally occurring in wild birds such as ducks, geese, swans, and gulls. These viruses generally do not cause illness in wild birds, however, when spread to poultry they can be highly pathogenic and cause illness and death in backyard and commercial farms.
Antibiotic Resistant Bacteria in Migratory Birds
Migratory birds, and particularly those using habitats close to human settlements, may be infected with antibiotic resistant bacteria. The USGS is working with public health professionals to understand the role of birds in the maintenance and dispersal of antibiotic resistant bacteria. Additionally, the USGS is investigating how antibiotic resistant bacteria in birds may relate to public and ecosystem health.
Beak Deformities in Landbirds
Over the past 20 years, Alaskans have witnessed a startling increase of beak deformities among Black-capped Chickadees and other species of resident birds. This disease, called avian keratin disorder (AKD), is characterized by debilitating beak overgrowth and other abnormalities of keratinized tissues. Affected birds have difficulty feeding and preening, and may suffer high rates of mortality.
Diseases and Contaminants in Waterfowl
Waterfowl are common reservoirs for a variety of avian diseases and can suffer significant mortality from certain pathogens. Additionally, waterfowl are exposed to naturally occurring and human sources of contaminants. Research at the USGS Alaska Science Center on disease and contaminants in waterfowl strengthens the efficiency and effectiveness of disease surveillance across North America.
Harmful Algal Bloom Toxins in Alaska Seabirds
Seabird die-offs occur irregularly, but recent die-offs were unusual due to the large number and variety of species affected, the long die-off duration, and the large spatial extent. Coastal residents and scientists have been monitoring the size and scope of these die-offs, as well as investigating potential causes.
Molecular Ecology Laboratory in Alaska
The Molecular Ecology Laboratory at the USGS Alaska Science Center provides genetic capabilities for the wide range of science needs of the Department of the Interior nationally as well as on trust species and resources in Alaska.
Wildlife Disease and Environmental Health Fact Sheet
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Date published: August 21, 2018Status: ActiveAntibiotic Resistant Bacteria in Migratory Birds
Migratory birds, and particularly those using habitats close to human settlements, may be infected with antibiotic resistant bacteria. The USGS is working with public health professionals to understand the role of birds in the maintenance and dispersal of antibiotic resistant bacteria. Additionally, the USGS is investigating how antibiotic resistant bacteria in birds may relate to public and...
Contacts: Andy Ramey, Ph.D., Christina Ahlstrom, Ph.D. -
Date published: August 22, 2017Status: ActiveBeak Deformities in Landbirds
Over the past 20 years, Alaskans have witnessed a startling increase of beak deformities among Black-capped Chickadees and other species of resident birds. This disease, called avian keratin disorder (AKD), is characterized by debilitating beak overgrowth and other abnormalities of keratinized tissues. Affected birds have difficulty feeding and preening, and may suffer high rates of mortality...
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Date published: July 13, 2017Status: ActiveAvian Influenza Research
Since 2006, the USGS Alaska Science Center has been part of the State and Federal interagency team for the detection and response to highly pathogenic (HPAI) viruses in North America. Avian influenza or "bird flu" is a viral disease that primarily infects domestic poultry and wild birds. Avian influenza viruses are naturally occurring in wild birds such as ducks, geese, swans, and gulls. These...
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Date published: July 1, 2017Status: ActiveDiseases and Contaminants in Waterfowl
Waterfowl are common reservoirs for a variety of avian diseases and can suffer significant mortality from certain pathogens. Additionally, waterfowl are exposed to naturally occurring and human sources of contaminants. Research at the USGS Alaska Science Center on disease and contaminants in waterfowl strengthens the efficiency and effectiveness of disease surveillance across North America....
Attribution: Alaska Science Center -
Date published: June 20, 2017Status: ActiveMolecular Ecology Laboratory in Alaska
The Molecular Ecology Laboratory at the USGS Alaska Science Center provides genetic capabilities for the wide range of science needs of the Department of the Interior nationally as well as on trust species and resources in Alaska.
Contacts: Sandra L Talbot, Ph.D., John M Pearce, Ph.D.
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Year Published: 2013Wildlife disease and environmental health in Alaska
Environmental health is defined by connections between the physical environment, ecological health, and human health. Current research within the U.S. Geological Survey (USGS) recognizes the importance of this integrated research philosophy, which includes study of disease and pollutants as they pertain to wildlife and humans. Due to its key...
Van Hemert, Caroline R.; Pearce, John M.; Oakley, Karen; Whalen, Mary E.Attribution: Alaska Science Center, EcosystemsView CitationWildlife disease and environmental health in Alaska; 2013; FS; 2013-3027; Van Hemert, Caroline ; Pearce, John ; Oakley, Karen ; Whalen, Mary
Survey of Arctic Alaskan wildlife for influenza A antibodies: Limited evidence for exposure of mammals
Influenza A viruses (IAVs) are maintained in wild waterbirds and have the potential to infect a broad range of species, including wild mammals. The Arctic Coastal Plain of Alaska supports a diverse suite of species, including waterfowl that are common hosts of IAVs. Mammals co-occur with geese and other migratory waterbirds during the summer...
Van Hemert, Caroline R.; Spivey, Timothy J.; Uher-Koch, Brian D.; Atwood, Todd C.; Sinnett, David R.; Meixell, Brandt W.; Hupp, Jerry W.; Jiang, Kaijun; Adams, Layne G.; Gustine, David D.; Ramey, Andrew M.; Wan, Xiu-Feng Genetic evidence supports sporadic and independent introductions of subtype H5 low pathogenic avian influenza A viruses from wild birds to domestic poultry in North America
Wild bird–origin influenza A viruses (IAVs or avian influenza) have led to sporadic outbreaks among domestic poultry in the United States (US) and Canada, resulting in economic losses through the implementation of costly containment practices and destruction of birds. We used evolutionary analyses of virus sequence data to determine that 78 H5 low...
Li, Lei; Bowman, Andrew S.; DeLiberto, Thomas J.; Killian, Mary L.; Krauss, Scott; Nolting, Jacqueline M.; Torchetti, Mia Kim; Ramey, Andrew M.; Reeves, Andrew B.; Stallknecht, David E.; Webby, Richard J.; Wan, Xiu-Feng Introduction of Eurasian-origin H8N4 influenza A virus into North America via migratory birds
We identified a Eurasian-origin influenza A(H8N4) virus in North America by sampling wild birds in western Alaska, USA. Evidence for repeated introductions of influenza A viruses into North America by migratory birds suggests that intercontinental dispersal might not be exceedingly rare and that our understanding of viral establishment is...
Ramey, Andrew M.; Reeves, Andrew B.; Donnelly, Tyrone F.; Poulson, Rebecca L.; Stallknecht, David E. Effect of climate change on disease spread in wildlife: Chapter 36
A growing body of evidence indicates that climate change alone, or acting synergistically with current anthropogenic threats, is affecting the health of wild populations of aquatic and terrestrial wildlife. Measurable by-products of climate change include elevated atmospheric concentrations of greenhouse gases, higher average global temperatures;...
Hofmeister, Erik K.; Van Hemert, Caroline R. Evidence for haemosporidian parasite infections in Spectacled Eiders (Somateria fischeri) sampled in Alaska during the breeding season
We assessed hematozoa infection in Spectacled Eiders (Somateria fischeri) at two areas in Alaska. No Haemoproteus or Plasmodium species were detected. Leucocytozoon prevalence was 6.5% for adults across sites and 41.9% for juveniles sampled in the Arctic, providing evidence for local transmission. All ...
Reed, John A.; Sexson, Matthew G.; Smith, Matthew M.; Schmutz, Joel A.; Ramey, Andrew M. Avian keratin disorder of Alaska black-capped chickadees is associated with Poecivirus infection
BackgroundAvian keratin disorder (AKD) is an epizootic of debilitating beak deformities, first documented in black-capped chickadees (Poecile atricapillus) in Alaska during the late 1990s. Similar deformities have now been recorded in dozens of species of birds across multiple continents. Despite this, the etiology of AKD has remained elusive,...
Zylberberg, Maxine; Van Hemert, Caroline R.; Handel, Colleen M.; DeRisi, Joseph L. Acquisition and dissemination of cephalosporin-resistant E. coli in migratory birds sampled at an Alaska landfill as inferred through genomic analysis
Antimicrobial resistance (AMR) in bacterial pathogens threatens global health, though the spread of AMR bacteria and AMR genes between humans, animals, and the environment is still largely unknown. Here, we investigated the role of wild birds in the epidemiology of AMR Escherichia coli. Using next-generation sequencing, we characterized...
Ahlstrom, Christina Ann; Bonnedahl, Jonas; Woksepp, Hanna; Hernandez, Jorge; Bjorn, Olsen; Ramey, Andrew M. Influenza A virus recovery, diversity, and intercontinental exchange: A multi-year assessment of wild bird sampling at Izembek National Wildlife Refuge, Alaska
Western Alaska is a potential point-of-entry for foreign-origin influenza A viruses (IAVs) into North America via migratory birds. We sampled waterfowl and gulls for IAVs at Izembek National Wildlife Refuge (NWR) in western Alaska, USA, during late summer and autumn months of 2011–2015, to evaluate the abundance and diversity of viruses at this...
Reeves, Andrew B.; Hall, Jeffery S.; Poulson, Rebecca L.; Donnelly, Tyrone F.; Stallknecht, David E.; Ramey, Andrew M. Antibiotic-resistant Escherichia coli in migratory birds inhabiting remote Alaska
We explored the abundance of antibiotic-resistant Escherichia coli among migratory birds at remote sites in Alaska and used a comparative approach to speculate on plausible explanations for differences in detection among species. At a remote island site, we detected antibiotic-resistant E. coli phenotypes in samples collected...
Ramey, Andrew M.; Hernandez, Jorge; Tyrlöv, Veronica; Uher-Koch, Brian D.; Schmutz, Joel A.; Atterby, Clara; Järhult, Josef D.; Bonnedahl, Jonas Lessons learned from research and surveillance directed at highly pathogenic influenza A viruses in wild birds inhabiting North America
Following detections of highly pathogenic (HP) influenza A viruses (IAVs) in wild birds inhabiting East Asia after the turn of the millennium, the intensity of sampling of wild birds for IAVs increased throughout much of North America. The objectives for many research and surveillance efforts were directed towards detecting Eurasian origin HP IAVs...
Ramey, Andrew M.; DeLiberto, Thomas J.; Berhane, Yohannes; Swayne, David E.; Stallknecht, David E. Increased prevalence of antibiotic-resistant E. coli in gulls sampled in southcentral Alaska is associated with urban environments
BackgroundAntibiotic-resistant bacteria pose challenges to healthcare delivery systems globally; however, limited information is available regarding the prevalence and spread of such bacteria in the environment. The aim of this study was to compare the prevalence of antibiotic-resistant bacteria in large-bodied gulls (Larus spp.) at urban and...
Atterby, Clara; Ramey, Andrew M.; Gustafsson Hall, Gabriel; Jarhult, Josef; Borjesson, Stefan; Bonnedahl, Jonas Bacterial genomics reveal the complex epidemiology of an emerging pathogen in arctic and boreal ungulates
Northern ecosystems are currently experiencing unprecedented ecological change, largely driven by a rapidly changing climate. Pathogen range expansion, and emergence and altered patterns of infectious disease, are increasingly reported in wildlife at high latitudes. Understanding the causes and consequences of shifting pathogen diversity and host-...
Forde, Taya L.; Orsel, Karin; Zadoks, Ruth N.; Biek, Roman; Adams, Layne G.; Checkley, Sylvia L.; Davison, Tracy; De Buck, Jeroen; Dumond, Mathieu; Elkin, Brett T.; Finnegan, Laura; Macbeth, Bryan J.; Nelson, Cait; Niptanatiak, Amanda; Sather, Shane; Schwantje, Helen M.; van der Meer, Frank; Kutz, Susan J.