The primary objective of this task is to develop tools for predicting the long-term geomorphic evolution of estuaries. Sediment core and historical change analysis will be used in combination with interpretation of high-resolution seismic profiles to develop tools for predicting geomorphic evolution of estuaries. Historical change analysis will use hydrographic and lidar data. Longer-term data will be derived from sediment cores.
This research is part of the project, “Sediment Transport in Coastal Environments.”
Learn about all of the “Sediment Transport in Coastal Environments” research studies by choosing a title below.
Sediment Transport in Coastal Environments
Coastal watershed and estuary restoration in the Monterey Bay area
Transport of invasive microorganisms
Sediment transport in submarine canyons
Columbia River estuary
Sediment transport between estuarine habitats in San Francisco Bay
Drag and sediment transport: conditions at the bottom boundary
San Francisco Bay geomorphology
Below are data or web applications associated with this project.
High-resolution (1 m) digital elevation model (DEM) of San Francisco Bay, California, created using bathymetry data collected between 1999 and 2020 (ver. 2.0, July 2021)
Pilot study on bathymetric change analyses in the Sacramento-San Joaquin Delta, California
Bathymetry, topography, and acoustic backscatter data, and a digital elevation model (DEM) of the Cache Slough Complex and Sacramento River Deep Water Ship Channel, Sacramento-San Joaquin Delta, California
Gravity cores from San Pablo Bay and Carquinez Strait, San Francisco Bay, California
Below are publications associated with this project.
Drivers of extreme water levels in a large, urban, high-energy coastal estuary – A case study of the San Francisco Bay
Shoreline retreat of the Corte Madera marshes, 1853 to 2016, Marin County, California
Morphodynamic resilience of intertidal mudflats on a seasonal time scale
Intertidal mudflats are morphodynamic features present in many estuaries worldwide. Often located between vegetated shores and deep channels they comprise valuable ecosystems and serve to protect the hinterland by attenuating waves. Although mudflats are persistently present on yearly to decadal time scales, little is known on their morphodynamic adaptation to short‐term variations in forcing such
A revised continuous surface elevation model for modeling
Slough evolution and legacy mercury remobilization induced by wetland restoration in South San Francisco Bay
Modeling morphodynamic development in the Alviso Slough system, South San Francisco Bay, California
How can climate change and engineered water conveyance affect sediment dynamics in the San Francisco Bay-Delta system?
Description of gravity cores from San Pablo Bay and Carquinez Strait, San Francisco Bay, California
A new seamless, high-resolution digital elevation model of the San Francisco Bay-Delta Estuary, California
Is “morphodynamic equilibrium” an oxymoron?
Mudflat morphodynamics and the impact of sea level rise in South San Francisco Bay
Bathymetric survey and digital elevation model of Little Holland Tract, Sacramento-San Joaquin Delta, California
- Overview
The primary objective of this task is to develop tools for predicting the long-term geomorphic evolution of estuaries. Sediment core and historical change analysis will be used in combination with interpretation of high-resolution seismic profiles to develop tools for predicting geomorphic evolution of estuaries. Historical change analysis will use hydrographic and lidar data. Longer-term data will be derived from sediment cores.
This research is part of the project, “Sediment Transport in Coastal Environments.”
Locations of sediment samples collected by the USGS in winter 2008 within the San Francisco Bay study area, used to groundtruth acoustic data interpretations. - Science
Learn about all of the “Sediment Transport in Coastal Environments” research studies by choosing a title below.
Sediment Transport in Coastal Environments
Our research goals are to provide the scientific information, knowledge, and tools required to ensure that decisions about land and resource use, management practices, and future development in the coastal zone and adjacent watersheds can be evaluated with a complete understanding of the probable effects on coastal ecosystems and communities, and a full assessment of their vulnerability to natural...Coastal watershed and estuary restoration in the Monterey Bay area
Objectives: Support further work by the USGS and collaborating federal, state, and local agencies and academic partners in analyzing the effectiveness of restoration work in coastal watersheds and estuaries in the Monterey Bay area. The USGS will play a supporting role in field efforts led by NOAA and California State University - Monterey Bay to measure physical and ecological changes in the...Transport of invasive microorganisms
The objectives of his project are to investigate the vectors and timing of microbiological invasions and the subsequent dispersal of these non-native organisms due to sediment transport. We will attempt to confirm the identification of specific invasives encountered with molecular sequencing, monitor the spread of the invading populations through their recent distribution and the historic...Sediment transport in submarine canyons
Objectives: Produce a step-change in understanding of submarine turbidity currents by measuring their two key features (synchronous velocity and concentration profiles) in detail (every 2-to-30 seconds) for the first time, and documenting spatial changes in their flow velocity from source-to-sink for the first time.Columbia River estuary
This research is part of the project “Sediment Transport in Coastal Environments.” We aim to support regional sediment management in the Columbia River littoral cell by monitoring and modeling shoreline change, modeling fate of disposed dredged material, and studying bedform morphology.Sediment transport between estuarine habitats in San Francisco Bay
We investigate mechanisms of sediment transport, resuspension dynamics in shoals, wave evolution in the shallows, wave attenuation in marshes, and transport of sediment between mudflats and marshes. We produce data sets for calibration of and comparison with sediment transport models, including wave parameters, suspended sediment concentration, and sediment flux.Drag and sediment transport: conditions at the bottom boundary
Research on bed sediment grain size, bedform morphology, vegetation characteristics, and sediment resuspension and transport.San Francisco Bay geomorphology
The primary objective of this task is to develop tools for predicting the long-term geomorphic evolution of estuaries. Sediment core and historical change analysis will be used in combination with interpretation of high-resolution seismic profiles to develop tools for predicting geomorphic evolution of estuaries. Historical change analysis will use hydrographic and lidar data. Longer-term data... - Data
Below are data or web applications associated with this project.
High-resolution (1 m) digital elevation model (DEM) of San Francisco Bay, California, created using bathymetry data collected between 1999 and 2020 (ver. 2.0, July 2021)
A 1-m resolution bathymetric digital elevation model (DEM) of all off San Francisco Bay was constructed from bathymetric surveys collected from 1999 to 2016. The DEM has been divided into northern and southern sections due to file size, and is available in both MLLW and NAVD88 versions. Background: In 2014 and 2015 the California Ocean Protection Council (OPC) contracted the collection of bathyPilot study on bathymetric change analyses in the Sacramento-San Joaquin Delta, California
The bathymetry of the Sacramento-San Joaquin Delta affects the flow of water and sediment throughout the system and is a basic control on levee stability, habitat distribution, and water quality. Delta bathymetry is dynamic, responding to both natural forces and human activities. Assessment of future Delta conditions is aided by understanding how its bathymetry has changed in the past. This pilotBathymetry, topography, and acoustic backscatter data, and a digital elevation model (DEM) of the Cache Slough Complex and Sacramento River Deep Water Ship Channel, Sacramento-San Joaquin Delta, California
This data release presents bathymetric and topographic data from surveys performed between 2017 and 2018 in the Cache Slough Complex and the Sacramento River Deep Water Ship Channel (DWSC), northern Sacramento-San Joaquin Delta, California. The shallow, highly vegetated aquatic habitats of this region necessitated a variety of survey platforms and techniques. In the deeper channels, swath bathymetGravity cores from San Pablo Bay and Carquinez Strait, San Francisco Bay, California
This data release contains information on gravity cores that were collected by the U.S. Geological Survey in the area of San Pablo Bay and Carquinez Strait, California in 1990, 1991, and 2000. Ten (10) pdf files describe gravity cores that were split, photographed, and imaged by X-rays, and another pdf file contains a core-log legend. In addition, a shapefile (sanpablo_spls.shp) provides sample co - Publications
Below are publications associated with this project.
Filter Total Items: 22Drivers of extreme water levels in a large, urban, high-energy coastal estuary – A case study of the San Francisco Bay
Reliable and long-term hindcast data of water levels are essential in quantifying return period and values of extreme water levels. In order to inform design decisions on a local flood control district level, process-based numerical modeling has proven an essential tool to provide the needed temporal and spatial coverage for different extreme value analysis methods. To determine the importance ofAuthorsKees Nederhoff, Rohin Saleh, Babak Tehranirad, Liv M. Herdman, Li H. Erikson, Patrick L. Barnard, Mick Van der WegenShoreline retreat of the Corte Madera marshes, 1853 to 2016, Marin County, California
The greater San Francisco Bay estuary, prior to human intervention, encompassed about 2,200 km2 of tidal and salt marshes. Over time, these areas became increasingly diked, developed, and altered from their natural state. In addition, natural forces are always driving a continually shifting equilibrium.This study area, the Corte Madera marshes, is a tidal marsh or wetland located in southeastern MAuthorsBradley A. Carkin, Robert E. Kayen, Florence L. WongMorphodynamic resilience of intertidal mudflats on a seasonal time scale
Intertidal mudflats are morphodynamic features present in many estuaries worldwide. Often located between vegetated shores and deep channels they comprise valuable ecosystems and serve to protect the hinterland by attenuating waves. Although mudflats are persistently present on yearly to decadal time scales, little is known on their morphodynamic adaptation to short‐term variations in forcing such
AuthorsMick Van der Wegen, Dano Roelvink, Bruce E. JaffeA revised continuous surface elevation model for modeling
A digital elevation model (DEM) is an essential component of any hydrodynamic model. The Delta Modeling Section (Section) has maintained a database of bathymetry soundings and levee surveys for decades and published a 10-meter (10m) DEM for the San Francisco Bay and Sacramento-San Joaquin Delta (Delta) (California Department of Water Resources 2012). In collaboration with the U.S. Geological SurveAuthorsRueen-Fang Wang, Eli Ateljevich, Theresa A. Fregoso, Bruce E. JaffeSlough evolution and legacy mercury remobilization induced by wetland restoration in South San Francisco Bay
Coastal wetlands have a long history of degradation and destruction due to human development. Now recognized as one of the most productive ecosystems in the world, substantial efforts are being made to restore this critical habitat. While wetland restoration efforts are generally viewed as beneficial in terms of providing wildlife habitat and flood control, they are often accompanied by dramatic pAuthorsAmy C. Foxgrover, Mark C. Marvin-DiPasquale, Bruce E. Jaffe, Theresa A. FregosoModeling morphodynamic development in the Alviso Slough system, South San Francisco Bay, California
Alviso Slough area, South San Francisco Bay, California, is the site of an ongoing effort to restore former salt production ponds to intertidal habitat. As restoration proceeds and the levees surrounding the former salt production ponds are breached, the increase in tidal prism and associated sediment scour in the sloughs will remobilize legacy mercury deposits. A numerical model that is able to aAuthorsMick Van der Wegen, Johan Reyes, Bruce Jaffe, Amy FoxgroverHow can climate change and engineered water conveyance affect sediment dynamics in the San Francisco Bay-Delta system?
Suspended sediment concentration is an important estuarine health indicator. Estuarine ecosystems rely on the maintenance of habitat conditions, which are changing due to direct human impact and climate change. This study aims to evaluate the impact of climate change relative to engineering measures on estuarine fine sediment dynamics and sediment budgets. We use the highly engineered San FranciscAuthorsFernanda Achete, Mick Van der Wegen, Jan Adriaan Roelvink, Bruce E. JaffeDescription of gravity cores from San Pablo Bay and Carquinez Strait, San Francisco Bay, California
Seventy-two gravity cores were collected by the U.S. Geological Survey in 1990, 1991, and 2000 from San Pablo Bay and Carquinez Strait, California. The gravity cores collected within San Pablo Bay contain bioturbated laminated silts and sandy clays, whole and broken bivalve shells (mostly mussels), fossil tube structures, and fine-grained plant or wood fragments. Gravity cores from the channel walAuthorsDonald L. Woodrow, John L. Chin, Florence L. Wong, Theresa A. Fregoso, Bruce E. JaffeA new seamless, high-resolution digital elevation model of the San Francisco Bay-Delta Estuary, California
Climate change, sea-level rise, and human development have contributed to the changing geomorphology of the San Francisco Bay - Delta (Bay-Delta) Estuary system. The need to predict scenarios of change led to the development of a new seamless, high-resolution digital elevation model (DEM) of the Bay – Delta that can be used by modelers attempting to understand potential future changes to the estuaAuthorsTheresa A. Fregoso, Rueen-Fang Wang, Eli Ateljevich, Bruce E. JaffeIs “morphodynamic equilibrium” an oxymoron?
Morphodynamic equilibrium is a widely adopted yet elusive concept in the field of geomorphology of coasts, rivers and estuaries. Based on the Exner equation, an expression of mass conservation of sediment, we distinguish three types of equilibrium defined as static and dynamic, of which two different types exist. Other expressions such as statistical and quasi-equilibrium which do not strictly satAuthorsZeng Zhou, Giovanni Coco, Ian Townend, Maitane Olabarrieta, Mick van der Wegen, Zheng Gong, Andrea D'Alpaos, Shu Gao, Bruce E. Jaffe, Guy R. Gelfenbaum, Qing He, Yaping Wang, Stefano Lanzoni, Zhengbing Wang, Han Winterwerp, Changkuan ZhangMudflat morphodynamics and the impact of sea level rise in South San Francisco Bay
Estuarine tidal mudflats form unique habitats and maintain valuable ecosystems. Historic measurements of a mudflat in San Fancsico Bay over the past 150 years suggest the development of a rather stable mudflat profile. This raises questions on its origin and governing processes as well as on the mudflats’ fate under scenarios of sea level rise and decreasing sediment supply. We developed a 1D morpAuthorsMick Van der Wegen, Bruce E. Jaffe, Amy C. Foxgrover, Dano RoelvinkBathymetric survey and digital elevation model of Little Holland Tract, Sacramento-San Joaquin Delta, California
The U.S. Geological Survey conducted a bathymetric survey in Little Holland Tract, a flooded agricultural tract, in the northern Sacramento-San Joaquin Delta (the “Delta”) during the summer of 2015. The new bathymetric data were combined with existing data to generate a digital elevation model (DEM) at 1-meter resolution. Little Holland Tract (LHT) was historically diked off for agricultural usesAuthorsAlexander G. Snyder, Jessica R. Lacy, Andrew W. Stevens, Emily M. Carlson