Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42712
Environmental gradients of selection for an alpine-obligate bird, the white-tailed ptarmigan (Lagopus leucura) Environmental gradients of selection for an alpine-obligate bird, the white-tailed ptarmigan (Lagopus leucura)
The warming climate will expose alpine species adapted to a highly seasonal, harsh environment to novel environmental conditions. A species can shift their distribution, acclimate, or adapt in response to a new climate. Alpine species have little suitable habitat to shift their distribution, and the limits of acclimation will likely be tested by climate change in the long-term. Adaptive...
Authors
Shawna J Zimmerman, Cameron L. Aldridge, Kathryn M. Langin, Gregory T Wann, Robert S. Cornman, Sara J. Oyler-McCance
Trait‐based variation in host contribution to pathogen transmission across species and resource supplies Trait‐based variation in host contribution to pathogen transmission across species and resource supplies
Two key knowledge gaps currently limit the development of more predictive and general models of pathogen transmission: (1) the physiological basis of heterogeneity in host contribution to pathogen transmission (reservoir potential) remains poorly understood, and (2) a general means of integrating the ecological dynamics of host communities has yet to emerge. If the traits responsible for
Authors
Miranda E Welsh, James P. Cronin, Charles E. Mitchell
A multi-state occupancy modelling framework for robust estimation of disease prevalence in multi-tissue disease systems A multi-state occupancy modelling framework for robust estimation of disease prevalence in multi-tissue disease systems
Given the public health, economic and conservation implications of zoonotic diseases, their effective surveillance is of paramount importance. The traditional approach to estimating pathogen prevalence as the proportion of infected individuals in the population is biased because it fails to account for imperfect detection. A statistically robust way to reduce bias in prevalence estimates...
Authors
Vratika Chaudhary, Samantha M Wisely, Felipe A Hernandez, James E. Hines, James D. Nichols, Madan K. Oli
Beyond sticks and stones: Integrating physical and ecological conditions into watershed restoration assessments using a food web modeling approach Beyond sticks and stones: Integrating physical and ecological conditions into watershed restoration assessments using a food web modeling approach
Watershed assessments have become common for prioritizing restoration in river networks. These assessments primarily focus on geomorphic conditions of rivers but less frequently incorporate non-geomorphic abiotic factors such as water chemistry and temperature, and biotic factors such as the structure of food webs. Using a dynamic food web model that integrates physical and ecological
Authors
Emily J Whitney, James R Bellmore, Joseph R. Benjamin, Chris E Jordan, Jason B. Dunham, Michael Newsom, Matt Nahorniak
What to do when invaders are out of control? What to do when invaders are out of control?
Biological invasions threaten species and ecosystems worldwide. Impacts from invasions are especially prevalent in freshwaters, where managers have struggled to contain the problem. Conventional approaches to managing invaders focus on prevention and control. In practice, these measures have proven to be variably effective. Control or eradication of established invaders is particularly...
Authors
Jason B. Dunham, Ivan Arismendi, Christina Murphy, Alex Koeberle, J Andres Olivos, James B Pearson, Francisco Pickens, David Roon, John R. Stevenson
Architecture of remnant trees influences native woody plant recruitment in abandoned Hawaiian pastures Architecture of remnant trees influences native woody plant recruitment in abandoned Hawaiian pastures
Abandoned tropical pastures offer opportunities for passive and active restoration of native forest communities. Tree architecture of remnant canopy trees may be one important factor that can facilitate native plant recruitment in abandoned pastures but has largely been overlooked. Here, we evaluated patterns of native woody plant recruitment under remnant trees in abandoned pastures on...
Authors
Evan M Rehm, Stephanie G. Yelenik, Marley Puanani Smith, Carla M. D’Antonio
Slender salamanders (genus Batrachoseps) reveal Southern California to be a center for the diversification, persistence, and introduction of salamander lineages Slender salamanders (genus Batrachoseps) reveal Southern California to be a center for the diversification, persistence, and introduction of salamander lineages
Background The southern California biodiversity hotspot has had a complex geological history, with both plate tectonic forces and sea level changes repeatedly reconfiguring the region, and likely driving both lineage splittings and extinctions. Here we investigate patterns of genetic divergence in two species of slender salamanders (Plethodontidae: Batrachoseps) in this region. The...
Authors
Elizabeth L Jockusch, Robert W Hansen, Robert N. Fisher, David B Wake
Assessing the assumptions of classification agreement, accuracy, and predictable healing time of sea lamprey wounds on lake trout Assessing the assumptions of classification agreement, accuracy, and predictable healing time of sea lamprey wounds on lake trout
Sea lamprey control in the Laurentian Great Lakes relies on records of sea lamprey wounds on lake trout to assess whether control efforts are supporting fisheries management targets. Wounding records have been maintained for 70 years under the assumption that they are a reliable and accurate reflection of sea lamprey damage inflicted on fish populations. However, two key assumptions...
Authors
Tyler Firkus, Cheryl Murphy, Jean V. Adams, Ted Treska, Gregory J. Fischer
Winter survival of female Ring-Necked Ducks in the Southern Atlantic Flyway Winter survival of female Ring-Necked Ducks in the Southern Atlantic Flyway
North American waterfowl harvest regulations are largely guided by the status of breeding populations. Nonetheless, understanding the demographics of wintering waterfowl populations can elucidate the effects of hunting pressure on population dynamics. The ring‐necked duck (Aythya collaris) breeds and winters in all North American administrative flyways and is one of the most abundant and...
Authors
Tori D. Mezebish, Glenn H. Olsen, Michele Goodman, Frank C. Rohwer, Mark D. McConnell
Capturing spatiotemporal patterns in presence-absence data to inform monitoring and sampling designs for the threatened Dakota skipper (Lepidoptera: Hesperiidae) in the Great Plains of the United States Capturing spatiotemporal patterns in presence-absence data to inform monitoring and sampling designs for the threatened Dakota skipper (Lepidoptera: Hesperiidae) in the Great Plains of the United States
Declines among species of insect pollinators, especially butterflies, has garnered attention from scientists and managers. Often these declines have spurred governments to declare some species as threatened or endangered. We used existing presence–absence data from surveys for the threatened Dakota skipper Hesperia dacotae (Skinner) to build statistical maps of species presence that...
Authors
Max Post van der Burg, Jane E. Austin, Mark T. Wiltermuth, Wesley E. Newton, Garrett J. MacDonald
Elemental and radionuclide exposures and uptakes by small rodents, invertebrates, and vegetation at active and post-production uranium mines in the Grand Canyon watershed Elemental and radionuclide exposures and uptakes by small rodents, invertebrates, and vegetation at active and post-production uranium mines in the Grand Canyon watershed
The effects of breccia pipe uranium mining in the Grand Canyon watershed (Arizona) on ecological and cultural resources are largely unknown. We characterized the exposure of biota to uranium and co-occurring ore body elements during active ore production and at a site where ore production had recently concluded. Our results indicate that biota have taken up uranium and other elements (e...
Authors
Danielle M. Cleveland, Jo Ellen Hinck, Julia S. Lankton
Strategic Plan for the North American Breeding Bird Survey, 2020–30 Strategic Plan for the North American Breeding Bird Survey, 2020–30
The North American Breeding Bird Survey (BBS) has been the cornerstone of continental bird conservation and management for hundreds of North American bird species in the United States and Canada for more than 50 years. This strategic plan was developed in collaboration with key partners and stakeholders and charts the ambitious course for the BBS over the next decade (2020–30). Using...
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