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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42876

Comparative toxicity of aquatic per- and polyfluoroalkyl substance exposure in three species of amphibians Comparative toxicity of aquatic per- and polyfluoroalkyl substance exposure in three species of amphibians

Per- and polyfluoroalkyl substances (PFAS) are contaminants of concern due to their widespread occurrence in the environment, persistence, and potential to elicit a range of negative health effects. Per- and polyfluoroalkyl substances are regularly detected in surface waters, but their effects on many aquatic organisms are still poorly understood. Species with thyroid-dependent...
Authors
Robert Wesley Flynn, Gary M. Hoover, Michael G. Iacchetta, Samuel C. Guffey, Youn J. Choi, Chloe De Perre, Belinda Huerta, Weiming Li, Jason T. Hoverman, Linda S. Lee, Maria S. Speulveda

Toward scoping reviews of individual bird species Toward scoping reviews of individual bird species

Scoping reviews, in which the literature on a given topic is systematically collated and summarized, aid literature searches and highlight knowledge gaps on a given topic, thus hastening scientific progress and informing conservation efforts. Because much research and conservation is targeted at the species level, ornithology and bird conservation would benefit from scoping reviews of...
Authors
Christopher J W McClure, Zackery Szymczycha, David L Anderson, Francisca Helena Aguiar-Silva, Sarah Schulwitz, Leah Dunn, MIchael T Henderson, Leticia Camacho, Jose de Jesus Vargas Gonzalez, Chris N. Parish, Evan R. Buechley, Jesse D’Elia, Sanford Wilbur, Kenneth Johansen, Devin L Johnson, Soren Moller, Ivan Pokrovsky, Todd E. Katzner

Site- and individual-level contaminations affect infection prevalence of an emerging infectious disease of amphibians Site- and individual-level contaminations affect infection prevalence of an emerging infectious disease of amphibians

Emerging infectious disease outbreaks are one of multiple stressors responsible for amphibian declines globally. In the northeastern United States, ranaviral diseases are prevalent in amphibians and other ectothermic species, but there is still uncertainty as to whether their presence is leading to population level effects. Further, there is also uncertainty surrounding the potential...
Authors
Kelly L. Smalling, Brittany A. Mosher, Luke R. Iwanowicz, Keith A. Loftin, Adam Boehlke, Michelle L. Hladik, Carly R. Muletz-Wolz, Nandadevi Cortes-Rodriguez, Robin Femmer, Evan H. Campbell Grant

Assessing vegetation recovery from energy development using a dynamic reference approach Assessing vegetation recovery from energy development using a dynamic reference approach

Ecologically relevant references are useful for evaluating ecosystem recovery, but references that are temporally static may be less useful when environmental conditions and disturbances are spatially and temporally heterogeneous. This challenge is particularly acute for ecosystems dominated by sagebrush (Artemisia spp.), where communities may require decades to recover from disturbance...
Authors
Adrian P. Monroe, Travis W. Nauman, Cameron L. Aldridge, Michael S. O’Donnell, Michael C. Duniway, Brian S. Cade, Daniel Manier, Patrick J. Anderson

Face-off: Novel depredation and nest defense behaviors between an invasive and a native predator in the Greater Everglades Ecosystem, Florida, USA Face-off: Novel depredation and nest defense behaviors between an invasive and a native predator in the Greater Everglades Ecosystem, Florida, USA

We describe several photo-documented novel interactions between intraguild predators in southern Florida—the native bobcat (Lynx rufus) and the invasive Burmese python (Python bivittatus). Over several days we documented a bobcat's depredation of an unguarded python nest and subsequent python nest defense behavior following the return of both animals to the nest. This is the first...
Authors
Andrea Faye Currylow, Matthew F. McCollister, Gretchen Erika Anderson, Jillian Maureen Josimovich, Austin Lee Fitzgerald, Christina M. Romagosa, Amy A. Yackel Adams

Higher temperature sensitivity of flowering than leaf-out alters the time between phenophases across temperate tree species Higher temperature sensitivity of flowering than leaf-out alters the time between phenophases across temperate tree species

Aim The aims of this study were to evaluate the changes in the length of the time period between leaf-out and flowering across temperate tree species, and associate these changes with potential physiological and environmental drivers to enhance mechanistic insight into these phenomena.Location Central Europe.Time period 1980–2016.Major taxa studied Six temperate woody species.Methods...
Authors
Xiaojun Geng, Yongshuo F. Fu, Shilong Piao, Fanghua Hao, Hans J. De Boeck, Xuan Zhang, Shouzhi Chen, Yahui Guo, Janet S. Prevey, Yann Vitasse, Josep Penuelas, Ivan A. Janssens, Nils Christian Stenseth

Coupling process-based and empirical models to assess management options to meet conservation goals Coupling process-based and empirical models to assess management options to meet conservation goals

Conservation lands face a mounting threat of ecosystem transformation and the loss of biodiversity from the invasion of fire-prone perennial and annual grasses. Managers must make difficult decisions to find efficient ways to expend limited resources to manage large and complex landscapes amidst substantial uncertainty regarding effective treatment strategies, climates, and invader...
Authors
Catherine S. Jarnevich, Catherine Cullinane Thomas, Nicholas E. Young, Perry Grissom, Dana M. Backer, Leonardo Frid

INHABIT: A web-based decision support tool for invasive plant species habitat visualization and assessment across the contiguous United States INHABIT: A web-based decision support tool for invasive plant species habitat visualization and assessment across the contiguous United States

Narrowing the communication and knowledge gap between producers and users of scientific data is a longstanding problem in ecological conservation and land management. Decision support tools (DSTs), including websites or interactive web applications, provide platforms that can help bridge this gap. DSTs can most effectively disseminate and translate research results when producers and...
Authors
Peder Engelstad, Catherine S. Jarnevich, Terri Hogan, Helen Sofaer, Ian S. Pearse, Jennifer Sieracki, Neil Frakes, Julia Sullivan, Nicholas E. Young, Janet S. Prevey, Pairsa Nicole Belamaric, Jillian Marie Laroe

Elevations of mangrove forests of Pohnpei, Micronesia Elevations of mangrove forests of Pohnpei, Micronesia

Mangrove surface elevation is the crux of mangrove vulnerability to sea level rise. Local topography influences critical periods of tidal inundation that govern distributions of mangrove species and dictates future distributions. This study surveyed ground surface elevations of the extensive mangroves of Pohnpei, Federated States of Micronesia, integrating four survey technologies to...
Authors
Joanna C Ellison, Kevin J. Buffington, Karen M. Thorne, Dean B. Gesch, Jeffrey Irwin, Jeffrey J. Danielson

Exploring genetic variation and population structure in a threatened species, Noturus placidus, with whole-genome sequence data Exploring genetic variation and population structure in a threatened species, Noturus placidus, with whole-genome sequence data

The Neosho madtom (Noturus placidus) is a small catfish, generally less than 3 inches in length, unique to the Neosho-Spring River system within the Arkansas River Basin. It was federally listed as threatened in 1990, largely due to habitat loss. For conservation efforts, we generated whole-genome sequence data from 10 Neosho madtom individuals originating from 3 geographically separated
Authors
Lynsey K. Whitacre, Mark L. Wildhaber, Gary S. Johnson, Harly J. Durbin, Troy N. Rowan, Robert D. Schnabel, Tendai Mhlanga-Mutangadura, Vernon M. Tabor, Daniel Fenner, Jared E. Decker

Kelp-forest dynamics controlled by substrate complexity Kelp-forest dynamics controlled by substrate complexity

The factors that determine why ecosystems exhibit abrupt shifts in state are of paramount importance for management, conservation, and restoration efforts. Kelp forests are emblematic of such abruptly shifting ecosystems, transitioning from kelp-dominated to urchin-dominated states around the world with increasing frequency, yet the underlying processes and mechanisms that control their...
Authors
Zachary Randell, Michael C. Kenner, Joseph A. Tomoleoni, Julie L. Yee, Mark Novak

Classifying behavior from short-interval biologging data: An example with GPS tracking of birds Classifying behavior from short-interval biologging data: An example with GPS tracking of birds

Recent advances in digital data collection have spurred accumulation of immense quantities of data that have potential to lead to remarkable ecological insight, but that also present analytic challenges. In the case of biologging data from birds, common analytical approaches to classifying movement behaviors are largely inappropriate for these massive data sets.We apply a framework for...
Authors
Silas Bergen, Manuela Huso, A. Duerr, Missy A Braham, Todd E. Katzner, Sara Schmuecker, Tricia A. Miller
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