Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42871
Long-term Pseudogymnoascus destructans surveillance data reveal factors contributing to pathogen presence Long-term Pseudogymnoascus destructans surveillance data reveal factors contributing to pathogen presence
The disease white-nose syndrome (WNS) was first recognized in upstate New York in 2006 and has since spread across much of the United States (U.S.), causing severe mortality in several North American bat species. To aid in the identification and monitoring of at-risk bat populations, we evaluate factors associated with the presence of the causative fungal agent of WNS, Pseudogymnoascus...
Authors
John Grider, Robin E. Russell, Anne Ballmann, Trevor J. Hefley
Hierarchical models improve the use of alligator abundance as an indicator Hierarchical models improve the use of alligator abundance as an indicator
Indicator species are species which can be monitored as an index to measure the overall health of an ecosystem. Crocodylians have been shown to be good indicators of wetland condition as they respond to changes in hydrology, can be efficiently monitored, and are a key part of ecosystem trophic relationships. Eye shine surveys at night are a standard method used to sample alligators, but...
Authors
Seth C. Farris, J. Hardin Waddle, Caitlin E. Hackett, Laura A. Brandt, Frank J. Mazzotti
Impacts of extreme environmental disturbances on piping plover survival are partially moderated by migratory connectivity Impacts of extreme environmental disturbances on piping plover survival are partially moderated by migratory connectivity
Effective conservation for listed migratory species requires an understanding of how drivers of population decline vary spatially and temporally, as well as knowledge of range-wide connectivity between breeding and nonbreeding areas. Environmental conditions distant from breeding areas can have lasting effects on the demography of migratory species, yet these consequences are often the...
Authors
Kristen S. Ellis, Michael J. Anteau, Francesca J. Cuthbert, Cheri L Gratto-Trevor, Joel G. Jorgensen, David J Newstead, Larkin A. Powell, Megan M. Ring, Mark H. Sherfy, Rose J. Swift, Dustin L. Toy, David N. Koons
Gene expression profiles in two razor clam populations: Discerning drivers of population status Gene expression profiles in two razor clam populations: Discerning drivers of population status
With rapidly changing marine ecosystems, shifts in abundance and distribution are being documented for a variety of intertidal species. We examined two adjacent populations of Pacific razor clams (Siliqua patula) in lower Cook Inlet, Alaska. One population (east) supported a sport and personal use fishery, but this has been closed since 2015 due to declines in abundance, and the second...
Authors
Heather A. Coletti, Lizabeth Bowen, Brenda Ballachey, Tammy L. Wilson, Shannon C. Waters-Dynes, Michael Booz, Katrina L Counihan, Tuula E. Hollmen, Benjamin Pister
Turtles of the World: A guide to every family Turtles of the World: A guide to every family
Turtles of the World reveals the extraordinary diversity of these amazing reptiles. Characterized by the bony shell that acts as a shield to protect the softer body within, turtles are survivors from the time of the dinosaurs and are even more ancient in evolutionary terms than snakes and crocodilians. Of more than 350 species known today, some are highly endangered. In this beautiful...
Authors
Jeffrey E. Lovich, Whit Gibbons
Comparative genomics analyses support the reclassification of Bisgaard taxon 40 as Mergibacter gen. nov., with Mergibacter septicus sp. nov. as type species: Novel insights into the phylogeny and virulence factors of a Pasteurellaceae family member associ Comparative genomics analyses support the reclassification of Bisgaard taxon 40 as Mergibacter gen. nov., with Mergibacter septicus sp. nov. as type species: Novel insights into the phylogeny and virulence factors of a Pasteurellaceae family member associ
The Pasteurellaceae family has been associated with fatal diseases in numerous avian species. Several new taxa within this family, including Bisgaard taxon 40, have been recently described in wild birds, but their genomic characteristics and pathogenicity are not well understood. We isolated Bisgaard taxon 40 from four species of seabirds, including one sampled during a mass, multi...
Authors
Eliana De Luca, Sonsiray Alvarez-Narvaez, Grazieli Maboni, Rodrigo P Baptista, Nicole M Nemeth, Kevin D. Niedringhaus, Jason T. Ladner, Jeffrey M. Lorch, Galina Koroleva, Sean Lovett, Gustavo F Palacios, Susan Sanchez
International importance of Percids: Summary and looking forward International importance of Percids: Summary and looking forward
Research presented in the preceding chapters emphasizes recent advancements in the research, management, and aquaculture of Walleye, Sauger, and Yellow Perch in North America. These percid fishes, along with the European Perch and Pikeperch, are economically and ecologically important fishes in their native geographic range. Advances in techniques to evaluate current habitat and predict...
Authors
Robin L. DeBruyne, Edward F. Roseman
Tissue and salinity specific Na+/Cl− cotransporter (NCC) orthologues involved in the adaptive osmoregulation of sea lamprey (Petromyzon marinus) Tissue and salinity specific Na+/Cl− cotransporter (NCC) orthologues involved in the adaptive osmoregulation of sea lamprey (Petromyzon marinus)
Two orthologues of the gene encoding the Na+-Cl− cotransporter (NCC), termed ncca and nccb, were found in the sea lamprey genome. No gene encoding the Na+-K+-2Cl− cotransporter 2 (nkcc2) was identified. In a phylogenetic comparison among other vertebrate NCC and NKCC sequences, the sea lamprey NCCs occupied basal positions within the NCC clades. In freshwater, ncca mRNA was found only in...
Authors
Andre Barany-Ruiz, Ciaran S Shaughnessy, Ryan M. Pelis, Juan Fuentes, Juan M Mancera, Stephen D. McCormick
Foreword: Control and conservation of lampreys beyond 2020 - Proceedings from the 3rd Sea Lamprey International Symposium (SLIS III) Foreword: Control and conservation of lampreys beyond 2020 - Proceedings from the 3rd Sea Lamprey International Symposium (SLIS III)
Introduction to the special issue on the 3rd Sea Lamprey International Symposium. The compiled papers in this special issue consist of a combination of syntheses requested in advance of the symposium and perspectives that emerged from the symposium break-out discussions. These written contributions address the symposium goals of updating our understanding of sea lamprey control and...
Authors
Robert L. McLaughlin, Jean V. Adams, Pedro R. Almeida, Jessica Barber, Dale P. Burkett, Margaret F. Docker, Nicholas S. Johnson, Mary L. Moser, Andrew M. Muir, Michael J. Siefkes, Todd B. Steeves, Michael P. Wilkie
A graphical causal model for resolving species identity effects and biodiversity–ecosystem function correlations: Reply A graphical causal model for resolving species identity effects and biodiversity–ecosystem function correlations: Reply
No abstract available.
Authors
Donald Schoolmaster, Chad R Zirbel, James P. Cronin
Clutch may predict growth of hatchling Burmese pythons better than food availability or sex Clutch may predict growth of hatchling Burmese pythons better than food availability or sex
Identifying which environmental and genetic factors affect growth pattern phenotypes can help biologists predict how organisms distribute finite energy resources in response to varying environmental conditions and physiological states. This information may be useful for monitoring and managing populations of cryptic, endangered, and invasive species. Consequently, we assessed the effects...
Authors
Jillian Maureen Josimovich, Bryan G. Falk, Alejandro Grajal-Puche, Emma B. Hanslowe, Ian A. Bartoszek, Robert Reed, Andrea Faye Currylow
Identifying factors that affect mountain lake sensitivity to atmospheric nitrogen deposition across multiple scales Identifying factors that affect mountain lake sensitivity to atmospheric nitrogen deposition across multiple scales
Increased nitrogen (N) deposition rates over the past century have affected both North American and European mountain lake ecosystems. Ecological sensitivity of mountain lakes to N deposition varies, however, because chemical and biological responses are modulated by local watershed and lake properties. We evaluated predictors of mountain lake sensitivity to atmospheric N deposition...
Authors
Benjamin Burpee, Jasmine Saros, Leora Nanus, Jill S. Baron, Janice Brahney, Kyle Christianson, Taylor Gantz, Andi Heard, Beth Hundey, Karin Koinig, Jiri Kopacek, Katrina Moser, Koren Nydick, Isabella A. Oleksy, Steven Sadro, Ruben Sommaruga, Rolf Vinebrooke, Jason Williams