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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42707

A hidden Markov model for estimating age-specific survival when age and size are uncertain A hidden Markov model for estimating age-specific survival when age and size are uncertain

Estimates of age-specific survival probabilities are needed for age-structured population models and to inform conservation decisions. However, determining the age of individuals in wildlife populations is often problematic. We present a hidden Markov model for estimating age-specific survival from capture–recapture or capture–recapture–recovery data when age is unknown and indicators of...
Authors
Timothy A. Gowan, Michael D. Tringali, Jeffrey A. Hostetler, Julien Martin, Leslie I. Ward-Geiger, Jennifer M Johnson

Quantifying the demographic vulnerabilities of dry woodlands to climate and competition using rangewide monitoring data Quantifying the demographic vulnerabilities of dry woodlands to climate and competition using rangewide monitoring data

Climate change is expected to alter the distribution and abundance of tree species, impacting ecosystem structure and function. Yet, anticipating where this will occur is often hampered by a lack of understanding of how demographic rates, most notably recruitment, vary in response to climate and competition across a species range. Using large-scale monitoring data on two dry woodland...
Authors
Robert K Shriver, Charles Yackulic, David M. Bell, John B. Bradford

Using tree swallows to assess reductions in PCB exposure as a result of dredging at Great Lakes Restoration Initiative (GLRI) sites in the Upper Midwest, USA Using tree swallows to assess reductions in PCB exposure as a result of dredging at Great Lakes Restoration Initiative (GLRI) sites in the Upper Midwest, USA

Tree swallows (Tachycineta bicolor) were used to assess the effectiveness of reducing polychlorinated biphenyl (PCB) exposure to wildlife as a result of contaminated sediment removal at locations across the Great Lakes under two dredging scenarios, full or spot dredging. For comparative purposes, other locations where no dredging occurred were also assessed. Calculating accumulation rate...
Authors
Christine M. Custer, Thomas W. Custer, Paul M. Dummer

Sea star wasting disease pathology in Pisaster ochraceus shows a basal-to-surface process affecting color phenotypes differently Sea star wasting disease pathology in Pisaster ochraceus shows a basal-to-surface process affecting color phenotypes differently

Sea star wasting disease (SSWD) refers to a suite of poorly described non-specific clinical signs including abnormal posture, epidermal ulceration, and limb autotomy (sloughing) causing mortalities of over 20 species of sea stars and subsequent ecological shifts throughout the northeastern Pacific. While SSWD is widely assumed to be infectious, with environmental conditions facilitating...
Authors
Thierry M. Work, Tina M. Weatherby, Christopher M. DeRito, Ryan M. Besemer, Ian Hewson

Wildfires and global change Wildfires and global change

No single factor produces wildfires; rather, they occur when fire thresholds (ignitions, fuels, and drought) are crossed. Anomalous weather events may lower these thresholds and thereby enhance the likelihood and spread of wildfires. Climate change increases the frequency with which some of these thresholds are crossed, extending the duration of the fire season and increasing the...
Authors
Juli G. Pausas, Jon Keeley

Impacts of sediment removal from and placement in coastal barrier island systems Impacts of sediment removal from and placement in coastal barrier island systems

Executive Summary On June 24, 2019, Congressman Raul Grijalva of Arizona, Chair of the House Committee on Natural Resources, sent a letter to the directors of the U.S. Fish and Wildlife Service and the U.S. Geological Survey to request their assistance in answering questions regarding coastal sediment resource management within the Coastal Barrier Resources System as defined by the...
Authors
Jennifer L. Miselis, James G. Flocks, Sara Zeigler, Davina Passeri, David R. Smith, Jill R. Bourque, Christopher R. Sherwood, Christopher G. Smith, Daniel J. Ciarletta, Kathryn Smith, Kristen Hart, David C. Kazyak, Alicia Berlin, Bianca Prohaska, Teresa Calleson, Kristi Yanchis

Synthetic aperture radar and optical mapping used to monitor change and replacement of Phragmites australis marsh in the Lower Mississippi River Delta, Louisiana Synthetic aperture radar and optical mapping used to monitor change and replacement of Phragmites australis marsh in the Lower Mississippi River Delta, Louisiana

Synthetic aperture radar (SAR) mapping of density as an enhancement of Phragmites australis optical live fractional cover (LFC) mapping was carried out in the lower Mississippi Delta during 2016 to 2019. Also, as part of the study, the replacement of P. australis with elephant-ear was analyzed. To that end, yearly maps from 2016 to 2019 of L-band SAR horizontal send, vertical receive (HV...
Authors
Elijah W. Ramsey III, Amina Rangoonwala

Diverse patterns of migratory timing, site use, and site fidelity by Alaska-breeding Whimbrels Diverse patterns of migratory timing, site use, and site fidelity by Alaska-breeding Whimbrels

Birds that conduct long-distance migrations exhibit varied patterns of consistency in migratory timing and site use. Understanding variation in these traits among populations can help uncover mechanisms driving migratory behaviors and identify potential population threats. Whimbrels (Numenius phaeopus) are long-distance migratory shorebirds with a Holarctic breeding distribution, and...
Authors
Daniel R. Ruthrauff, Christopher M. Harwood, T. Lee Tibbitts, Nils Warnock, Robert E. Gill

Distribution and demography of coastal cactus wrens (Campylorhynchus brunneicapillus) in southern San Diego County, California—2020 data summary Distribution and demography of coastal cactus wrens (Campylorhynchus brunneicapillus) in southern San Diego County, California—2020 data summary

Executive Summary Surveys for coastal Cactus Wren (Campylorhynchus brunneicapillus) were done in 378 established plots in southern San Diego County in 2020, encompassing three genetic clusters (Otay, Lake Jennings, and Sweetwater/Encanto genetic clusters). Two surveys were completed at each plot between March 1 and July 31. Cactus Wrens were detected in 131 plots (35 percent of plots)...
Authors
Suellen Lynn, Barbara E. Kus

Greater Yellowstone climate assessment: Past, present, and future climate change in the greater Yellowstone watersheds Greater Yellowstone climate assessment: Past, present, and future climate change in the greater Yellowstone watersheds

The Greater Yellowstone Area (GYA) is one of the last remaining large and nearly intact temperate ecosystems on Earth. GYA was originally defined in the 1970s as the Greater Yellowstone Ecosystem, which encompassed the minimum range of the grizzly bear. The boundary now includes about 22 million acres (8.9 million ha) in northwestern Wyoming, south central Montana, and eastern Idaho...
Authors
Steven W. Hostetler, Cathy Whitlock, Bryan Shuman, David Liefert, Charles Wolf Drimal, Scott Bischke

Fisheries research and monitoring activities of the Lake Erie Biological Station, 2020 Fisheries research and monitoring activities of the Lake Erie Biological Station, 2020

This report presents biomass-based summaries of fish communities in the West Basin of Lake Erie derived from USGS bottom trawl surveys conducted from 2013 to 2020 during June and September. The survey design provided temporal and spatial coverage that did not exist in the interagency trawl database, and thus complemented the August ODNR-OMNRF effort to reinforce stock assessments with...
Authors
Kevin R. Keretz, Patrick Kocovsky, Richard Kraus, James Roberts, Joseph Schmitt

Status and trends of pelagic and benthic prey fish populations in Lake Michigan, 2020 Status and trends of pelagic and benthic prey fish populations in Lake Michigan, 2020

Lakewide acoustic (AC) and bottom trawl (BT) surveys are conducted annually to generate indices of pelagic and benthic prey fish densities in Lake Michigan. The BT survey had been conducted each fall from 1973 through 2019 using 12-m trawls at depths ranging from 9 to 110 m and included 70 fixed locations distributed across seven transects; this survey estimates densities of seven prey...
Authors
Ralph William Tingley, David Bunnell, David Warner, Charles P. Madenjian, Patricia Dieter
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