Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 42876
The utility of zooarchaeological data to guide listing efforts for an imperiled mussel species (Bivalvia: Unionidae: Pleurobema riddellii) The utility of zooarchaeological data to guide listing efforts for an imperiled mussel species (Bivalvia: Unionidae: Pleurobema riddellii)
The status of species in freshwater systems shift over time due to natural and anthropogenic causes. Determining the magnitude and cause of these shifts requires a long-term perspective. This process is complicated when there are also questions about the taxonomic validity of a species. Addressing these issues is important because both can undermine conservation and management efforts if...
Authors
Charles R. Randklev, Steve Wolverton, Nathan A. Johnson, Chase H. Smith, Traci DuBose, Clint Robertson, Julian Conley
Use of upland and riparian areas by wintering bald eagles and implications for wind energy Use of upland and riparian areas by wintering bald eagles and implications for wind energy
Weather can shape movements of animals and alter their exposure to anthropogenic threats. Bald eagles (Haliaeetus leucocephalus) are increasingly at risk from collision with turbines used in onshore wind energy generation. In the midwestern United States, development of this energy source typically occurs in upland areas that bald eagles use only intermittently. Our objective was to...
Authors
Sara J Schmuecker, Drew A Becker, Michael J. Lanzone, Bob Fogg, Susan P Romano, Todd E. Katzner, Tricia A. Miller
Nesting ecology of White-faced Ibis (Plegadis chihi) in Great Salt Lake, Utah Nesting ecology of White-faced Ibis (Plegadis chihi) in Great Salt Lake, Utah
We studied the nesting ecology of White-faced Ibis (Plegadis chihi) at 3 sites within the Bear River Migratory Bird Refuge, Great Salt Lake, Utah, USA. Ibises built nests in small mounds (mean height = 14.4 ± 4.3 cm) above shallow water (mean depth = 12.0 ± 6.6 cm) located within patchy vegetation (mean percent vegetative cover = 17.2 ± 17.8% vegetative cover) with mean vegetation height...
Authors
Mark P. Herzog, Joshua T. Ackerman, C. Alex Hartman, Howard Browers
Mountain stoneflies may tolerate warming streams: Evidence from organismal physiology and gene expression Mountain stoneflies may tolerate warming streams: Evidence from organismal physiology and gene expression
Rapid glacier recession is altering the physical conditions of headwater streams. Stream temperatures are predicted to rise and become increasingly variable, putting entire meltwater-associated biological communities at risk of extinction. Thus, there is a pressing need to understand how thermal stress affects mountain stream insects, particularly where glaciers are likely to vanish on
Authors
Scott Hotaling, Alisha A. Shah, Kerry L. McGowan, Lusha M. Tronstad, J. Joseph Giersch, Debra S. Finn, H. Arthur Woods, Michael E. Dillon, Joanna L. Kelley
Taxonomic evaluation of the Grallaria rufula (Rufous Antpitta) complex (Aves: Passeriformes: Grallariidae) distinguishes sixteen species Taxonomic evaluation of the Grallaria rufula (Rufous Antpitta) complex (Aves: Passeriformes: Grallariidae) distinguishes sixteen species
Populations in the Rufous Antpitta (Grallaria rufula) complex occupy humid montane forests of the Andes from northern Colombia and adjacent Venezuela to central Bolivia. Their tawny to cinnamon-colored plumages are generally uniform, featuring subtle variation in hue and saturation across this range. In contrast to their conservative plumage, substantial vocal differences occur among
Authors
Morton L Isler, Terry Chesser, Mark B Robbins, Andres M Cuervo, C Daniel Cadena, Peter A. Hosner
Conservative plumage masks extraordinary phylogenetic diversity in the Grallaria rufula (Rufous Antpitta) complex of the humid Andes Conservative plumage masks extraordinary phylogenetic diversity in the Grallaria rufula (Rufous Antpitta) complex of the humid Andes
The Grallaria rufula complex is currently considered to consist of 2 species, G. rufula (Rufous Antpitta) and G. blakei (Chestnut Antpitta). However, it has been suggested that the complex, populations of which occur in humid montane forests from Venezuela to Bolivia, comprises a suite of vocally distinct yet morphologically cryptic species. We sequenced nuclear and mitochondrial DNA for...
Authors
Terry Chesser, Morton L Isler, Andres M Cuervo, C Daniel Cadena, Spencer C Galen, Laura M. Bergner, Robert C. Fleischer, Gustavo A Bravo, Daniel F Lane, Peter A. Hosner
Effects of barred owl (Strix varia) removal on population demography of northern spotted owls (Strix occidentalis caurina) in Washington and Oregon—2019 annual report Effects of barred owl (Strix varia) removal on population demography of northern spotted owls (Strix occidentalis caurina) in Washington and Oregon—2019 annual report
Strix occidentalis caurina (northern spotted owl; hereinafter referred to as spotted owl) have rapidly declined throughout the subspecies’ geographic range. Competition with invading Strix varia (barred owl) has been identified as an immediate cause of those declines. A pilot study in California showed that removal of barred owls coupled with conservation of suitable habitat conditions...
Authors
J. David Wiens, Katie M. Dugger, Damon B. Lesmeister, Krista E. Dilione, David C. Simon
Genomic architecture and repertoire of the rainbow trout immunoglobulin light chain genes Genomic architecture and repertoire of the rainbow trout immunoglobulin light chain genes
The genomic loci encoding the four immunoglobulin light chains (IgL1, IgL2, IgL3, and IgL4) in the Swanson trout genome assembly were annotated in order to provide a measurement of the potential IgL repertoire. IgL1 and IgL3 gene segments are co-localized on chromosomes 21, 18, 15, and 7 while IgL2 and IgL4 were found on chromosomes 13 and 17, respectively. In total, 48 constant (CL), 87...
Authors
Katherine Rego, John D. Hansen, Erin S Bromage
A new species of freshwater mussel in the genus Popenaias Frierson, 1927, from the Gulf coastal rivers of central Mexico (Bivalvia: Unionida: Unionidae) with comments on the genus A new species of freshwater mussel in the genus Popenaias Frierson, 1927, from the Gulf coastal rivers of central Mexico (Bivalvia: Unionida: Unionidae) with comments on the genus
The Gulf coastal drainages of central Mexico are a faunal transition zone between North and South America and harbor a unique assemblage of freshwater mussels (Bivalvia: Unionida). However, little information is available regarding the taxonomy, distribution, and evolutionary history of the Mexican mussel fauna due to limited sampling over the last 100 years. To address these knowledge...
Authors
Kentaro Inoue, Kevin S. Cummings, Jeremy S. Tiemann, Thomas D. Miller, Nathan Johnson, Chase H. Smith, Charles R. Randklev
Trends in inland commercial fisheries in the United States Trends in inland commercial fisheries in the United States
Inland fisheries, defined as finfish caught in lakes, rivers, and other water bodies, provide economic value and a source of protein at local and international levels. However, no comprehensive compilation of U.S. inland commercial fisheries exists. We sought to obtain data across all 50 states during 1990–2015 and noted a small, but significant, decline in harvest. The minimum harvest...
Authors
Devin N. Murray, David B. Bunnell, Mark W. Rogers, Abigail Lynch, Beard, Simon Funge-Smith
Tropical understory herbaceous community responds more strongly to hurricane disturbance than to experimental warming Tropical understory herbaceous community responds more strongly to hurricane disturbance than to experimental warming
The effects of climate change on tropical forests may have global consequences due to the forests’ high biodiversity and major role in the global carbon cycle. In this study, we document the effects of experimental warming on the abundance and composition of a tropical forest floor herbaceous plant community in the Luquillo Experimental Forest, Puerto Rico. This study was conducted...
Authors
Deborah K. Kennard, David Matlaga, Joanne Sharpe, Clay C. King, Aura M. Alonso-Rodriguez, Sasha C. Reed, Molly A. Cavaleri, Tana E. Wood
Tests in a semi-natural environment suggest that bait and switch strategy could be used to control invasive Common Carp Tests in a semi-natural environment suggest that bait and switch strategy could be used to control invasive Common Carp
Common Carp (Cyprinus carpio Linnaeus, 1758), is a highly invasive species that has had profound effects on biodiversity and ecosystem services. Many Carp management methods have been applied including physical removal, pesticide treatments of whole lakes, and water drawdowns. Herein, we tested key elements of a potential “bait and switch” approach in which corn could be used to induce...
Authors
Peter J Hundt, Jon Amberg, Blake W. Sauey, Kristen Vacura, Przemyslaw G. Bajer