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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42712

Pacific Continental Shelf Environmental Assessment (PaCSEA): Characterization of Seasonal Water Masses within the Northern California Current System Using Airborne Remote Sensing off Northern California, Oregon, and Washington, 2011–2012 Pacific Continental Shelf Environmental Assessment (PaCSEA): Characterization of Seasonal Water Masses within the Northern California Current System Using Airborne Remote Sensing off Northern California, Oregon, and Washington, 2011–2012

Here, we use ocean color measurements (Figure 1) and sea surface temperature (SST) data collected using sensors mounted on low-flying aircraft to characterize NCCS water masses and identify patterns among seasons and between years. To accomplish this, we applied k-means clustering to measured and derived ecologically-relevant physical and bio-optical variables (SST, Chla, absorbance by...
Authors
J A Schulien, Josh Adams, Jonathan J. Felis

Acute toxicity and clotting times of anticoagulant rodenticides to red-toothed (Odonus niger) and black (Melichthys niger) triggerfish, fathead minnow (Pimephales promelas), and largemouth bass (Micropterus salmoides) Acute toxicity and clotting times of anticoagulant rodenticides to red-toothed (Odonus niger) and black (Melichthys niger) triggerfish, fathead minnow (Pimephales promelas), and largemouth bass (Micropterus salmoides)

Anticoagulant rodenticides (ARs) areused in rateradication efforts on island wildlife refuges. ARbait pellets can get into coralreefareasduring broadcasting and leadto exposure ofnon-target organisms, such as marine fishes. The objective of this study was to determine the sensitivity of representative saltwater fishes, Red-toothed triggerfish (Odonus niger) and Black triggerfish (Melichthys...
Authors
Rachelle Riegerix, Mike Tanner, Robert W. Gale, Donald E. Tillitt

Influence of remediation on sediment toxicity within the Grand Calumet River, Indiana, USA Influence of remediation on sediment toxicity within the Grand Calumet River, Indiana, USA

The Grand Calumet River (GCR), located in northern Indiana, is contaminated due to a wide range of historical industrial activities. This study was conducted to determine the influence of sediment remediation within the GCR on concentrations of chemical contaminants and toxicity to sediment-dwelling organisms. Between 2005 and 2016, sediments with high concentrations of metals and toxic...
Authors
Jeffery A. Steevens, John M. Besser, Rebecca A. Dorman, Daniel W. Sparks

Review of studies of composition, toxicology and human health impacts of wastewater from unconventional oil and gas development from shale Review of studies of composition, toxicology and human health impacts of wastewater from unconventional oil and gas development from shale

Unconventional oil and gas (UOG) extractions has produced large economic benefits. However, prudent management of UOG wastes necessitates a thorough understanding of the complex composition, fate, and potential impacts of wastewater releases. UOG production results in large volumes of wastewater. Despite limited re-use of the wastewater, the majority needs to be disposed of, usually by...
Authors
Lynn M. Crosby, William H. Orem

Identification of management thresholds of urban development in support of aquatic biodiversity conservation Identification of management thresholds of urban development in support of aquatic biodiversity conservation

Urbanization degrades stream ecosystems and causes loss of bodiversity. Using benthic macroinvertebrates as a surragate for overall aquatic diversity, we conducted a series of analytical approaches to derive management thresholds of urban development designed to link ecological responses to the primary management goal of protecting aquatic diversity in streams within the Delaware Water...
Authors
Craig D. Snyder, John A. Young

Mortality of endangered juvenile Lost River Suckers associated with cyanobacteria blooms in mesocosms in Upper Klamath Lake, Oregon Mortality of endangered juvenile Lost River Suckers associated with cyanobacteria blooms in mesocosms in Upper Klamath Lake, Oregon

Unsustainably high mortality within the first 2 years of life prevents endangered Lost River Suckers Deltistes luxatus in Upper Klamath Lake, Oregon, from recruiting to spawning populations. Massive blooms of the cyanobacterium Aphanizomenon flos‐aquae and their subsequent death and decay in the lake (bloom‐crashes) are associated with high pH, low percent oxygen saturation, high total...
Authors
Summer M. Burdick, Danielle M Hereford, Carla M. Conway, Nathan V Banet, Rachel L. Powers, Barbara A. Martin, Diane G. Elliott

Differences in antibody responses against Chelonid Alphaherpesvirus 5 (ChHV5) suggest differences in virus biology in ChHV5-seropositive green turtles from Hawaii and ChHV5-seropositive green turtles from Florida Differences in antibody responses against Chelonid Alphaherpesvirus 5 (ChHV5) suggest differences in virus biology in ChHV5-seropositive green turtles from Hawaii and ChHV5-seropositive green turtles from Florida

Fibropapillomatosis (FP) is a tumor disease associated with a herpesvirus (chelonid herpesvirus 5 [ChHV5]) that affects mainly green turtles globally. Understanding the epidemiology of FP has been hampered by a lack of robust serological assays to monitor exposure to ChHV5. This is due in part to an inability to efficiently culture the virus in vitro for neutralization assays. Here, we...
Authors
Thierry M. Work, Julie Dagenais, Anna Willimann, George Balazs, Kate Mansfield, Mathias Ackermann

Expert bioblitzes facilitate non-native fish tracking and interagency partnerships Expert bioblitzes facilitate non-native fish tracking and interagency partnerships

Documenting the distribution and composition of non-native species populations can be challenging, especially when species cross jurisdictional boundaries that require interagency coordination. Herein I report the development of three tools that have been used in Florida over the past seven years to assist with tracking of non-native fishes: 1) an overarching organization to increase...
Authors
Pamela J. Schofield

Habitat affinities and at-sea ranging behaviors among main Hawaiian Island seabirds: Breeding seabird telemetry, 2013–2016 Habitat affinities and at-sea ranging behaviors among main Hawaiian Island seabirds: Breeding seabird telemetry, 2013–2016

Recent Hawaiʻi state clean energy policy mandates and federal interest in developing offshore renewable energy resources have prompted unsolicited lease requests for offshore wind energy infrastructure (OWEI) to be located in ocean waters off Hawaiʻi. This study describing at-sea ranging behaviors for five seabirds was intended to provide new information on Hawaiian breeding seabird...
Authors
Josh Adams, Jonathan J. Felis, Max Czapanskiy

Throughfall reduction x fertilization: Deep soil water usage in a clay rich ultisol under loblolly pine in the Southeast USA Throughfall reduction x fertilization: Deep soil water usage in a clay rich ultisol under loblolly pine in the Southeast USA

Forests in the Southeast USA are predicted to experience a moderate decrease in precipitation inputs over this century that may result in soil water deficiency during the growing season. The potential impact of a drier climate on the productivity of managed loblolly pine (Pinus taeda L.) plantations in the Southeast USA is uncertain. Access to water reserves in deep soil during drought...
Authors
Jiaguo Qi, Daniel M. Markewitz, Mary Ann McGuire, Lisa Samuelson, Eric Ward

Climate change vulnerability assessment for Pacific Lamprey in rivers of the Western United States Climate change vulnerability assessment for Pacific Lamprey in rivers of the Western United States

Pacific Lamprey (Entosphenus tridentatus) are a native anadromous species that, like salmon, historically returned to spawn in large numbers in watersheds along the west coast of the United States (U.S.). Lamprey play a vital role in river ecosystems and are one of the oldest vertebrates that have persisted over time likely influencing the evolution of many aquatic species. Pacific...
Authors
Christina J Wang, Howard A Shaller, Kelly C. Coates, Michael C. Hayes, Robert K Rose

Evaluation of survey methods for colonial waterbirds at Chase Lake National Wildlife Refuge, North Dakota Evaluation of survey methods for colonial waterbirds at Chase Lake National Wildlife Refuge, North Dakota

Estimating the number of breeding pairs in a mixed-species waterbird colony is difficult because colonial waterbirds are vulnerable to human intrusion and their colonies are often in remote areas with limited access. We investigated methods to estimate the number of nests of waterbirds at a large, mixed-species colony at Chase Lake National Wildlife Refuge in south-central North Dakota...
Authors
Lawrence D. Igl, Alisa J. Bartos, Robert O. Woodward, Paulette Scherr, Marsha A. Sovada
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