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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 42884

Modelling sea lice control by lumpfish on Atlantic salmon farms: interactions with mate limitation, temperature, and treatment rules Modelling sea lice control by lumpfish on Atlantic salmon farms: interactions with mate limitation, temperature, and treatment rules

Atlantic salmon farming is one of the largest aquaculture sectors in the world. A major impact on farm economics, fish welfare, and potentially nearby wild salmonid populations, is the sea louse ectoparasite Lepeophtheirus salmonis. Sea louse infestations are most often controlled through application of chemicals, but in most farming regions sea lice have evolved resistance to the small...
Authors
Gregor F. McEwan, Maya L. Groner, Allegra A. B. Cohen, Albert K. D. Imsland, Crawford W. Revie

Not so normal normals: Species distribution model results are sensitive to choice of climate normals and model type Not so normal normals: Species distribution model results are sensitive to choice of climate normals and model type

Species distribution models have many applications in conservation and ecology, and climate data are frequently a key driver of these models. Often, correlative modeling approaches are developed with readily available climate data; however, the impacts of the choice of climate normals is rarely considered. Here, we produced species distribution models for five disparate species using...
Authors
Catherine S. Jarnevich, Nicholas E. Young

Patterns of mercury and selenium exposure in Minnesota common loons Patterns of mercury and selenium exposure in Minnesota common loons

Common loons (Gavia immer) are at risk of elevated dietary mercury (Hg) exposure in portions of their breeding range. To assess the level of risk among loons in Minnesota (USA), we investigated loon blood Hg concentrations in breeding lakes across Minnesota. Loon blood Hg concentrations were regressed on predicted Hg concentrations in standardized 12‐cm whole‐organism yellow perch (Perca
Authors
Kevin P. Kenow, Steven C. Houdek, Luke J. Fara, Richard A. Erickson, Brian R. Gray, Travis J. Harrison, Bruce Monson, Carrol L. Henderson

The area under the precision‐recall curve as a performance metric for rare binary events The area under the precision‐recall curve as a performance metric for rare binary events

Species distribution models are used to study biogeographic patterns and guide decision‐making. The variable quality of these models makes it critical to assess whether a model's outputs are suitable for the intended use, but commonly used evaluation approaches are inappropriate for many ecological contexts. In particular, unrealistically high performance assessments have been associated...
Authors
Helen Sofaer, Jennifer A. Hoeting, Catherine S. Jarnevich

GPS tracking data reveals daily spatio-temporal movement patterns of waterfowl GPS tracking data reveals daily spatio-temporal movement patterns of waterfowl

Background Spatio-temporal patterns of movement can characterize relationships between organisms and their surroundings, and address gaps in our understanding of species ecology, activity budgets, bioenergetics, and habitat resource management. Highly mobile waterfowl, which can exploit resources over large spatial extents, are excellent models to understand relationships between...
Authors
Fiona McDuie, Michael L. Casazza, Cory T. Overton, Mark P. Herzog, C. Alex Hartman, Sarah H. Peterson, Cliff L. Feldheim, Joshua T. Ackerman

Patterns of big sagebrush plant community composition and stand structure in the western United States Patterns of big sagebrush plant community composition and stand structure in the western United States

Big sagebrush (Artemisia tridentata Nutt.) plant communities are found in western North America and comprise a mix of shrubs, forbs, and grasses. Climate, topography, and soil water availability are important factors that shape big sagebrush stand structure and plant community composition; however, most studies have focused on understanding these relationships at sites in a small portion...
Authors
Victoria E. Pennington, John B. Bradford, Kyle A. Palmquist, Rachel R. Renne, William K. Lauenroth

Trends in landbird density at two national parks in fragmented, mixed-use landscapes of the Pacific Northwest Trends in landbird density at two national parks in fragmented, mixed-use landscapes of the Pacific Northwest

National parks play a key role in conserving species by providing landscapes where threats from anthropogenic disturbance are reduced. In a recent study of 3 large wilderness parks in the Pacific Northwest, nearly all landbird species were found to be stable or increasing. Nonetheless, contemporary results from the Breeding Bird Survey and mark-recapture studies fuel concerns that some...
Authors
Chris Ray, Mandy Holmgren, Robert L. Wilkerson, Rodney B. Siegel, John R. Boetsch, Kurt J. Jenkins, Jason I. Ransom

Influenza A prevalence and subtype diversity in migrating teal sampled along the United States Gulf Coast Influenza A prevalence and subtype diversity in migrating teal sampled along the United States Gulf Coast

Wild birds in the order Anseriformes are important reservoirs for influenza A viruses (IAV); however, IAV prevalence and subtype diversity may vary by season, even at the same location. To better understand the ecology of IAV during waterfowl migration through the Gulf Coast of the United States (Louisiana and Texas), surveillance of blue-winged (Spatula discors) and American green...
Authors
Deborah Carter, Paul T. Link, Patrick Walther, Andrew M. Ramey, David E. Stallknecht, Rebecca L. Poulson

Carbon accumulation and vertical accretion in a restored vs. historic salt marsh in southern Puget Sound, Washington, United States Carbon accumulation and vertical accretion in a restored vs. historic salt marsh in southern Puget Sound, Washington, United States

Few comparisons exist between vertical accretion (VA) and carbon accumulation rates (CARs), in restored vs. historic (i.e., reference) marshes. Here we compare these processes in a formerly diked, sparsely vegetated, restored salt marsh (Six Gill Slough, SG), whose surface is subsided relative to the tidal frame, to an adjacent, relatively pristine, historic salt marsh (Animal Slough, AS...
Authors
Judith Z. Drexler, Isa Woo, Christopher C. Fuller, Glynnis Nakai

U.S. Geological Survey—Northern Prairie Wildlife Research Center 2017 research activity report U.S. Geological Survey—Northern Prairie Wildlife Research Center 2017 research activity report

The mission of Northern Prairie Wildlife Research Center is to provide scientific information needed to conserve and manage the Nation’s natural capital for current and future generations, with an emphasis on migratory birds, Department of the Interior trust resources, and ecosystems of the Nation’s interior. This report provides an overview of the studies conducted at Northern Prairie...

Climate change effects on deer and moose in the midwest Climate change effects on deer and moose in the midwest

Climate change is an increasing concern for wildlife managers across the United States and Canada. Because climate change may alter populations and harvest dynamics of key species in the region, midwestern states have identified the effects of climate change on ungulates as a priority research area. We conducted a literature review of projected climate change in the Midwest and the...
Authors
Sarah R. Weiskopf, Olivia E. LeDee, Laura M. Thompson

The plant diversity sampling design for The National Ecological Observatory Network The plant diversity sampling design for The National Ecological Observatory Network

The National Ecological Observatory Network (NEON) is designed to facilitate an understanding of the impact of environmental change on ecological systems. Observations of plant diversity—responsive to changes in climate, disturbance, and land use, and ecologically linked to soil, biogeochemistry, and organisms—result in NEON data products that cross a range of organizational levels...
Authors
David T. Barnett, Peter B. Adler, Benjamin R. Chemel, Paul A. Duffy, Brian J. Enquist, James B. Grace, Susan P. Harrison, Robert K. Peet, David S. Schimel, Thomas J. Stohlgren, Mark Vellend
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