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Publications

Browse more than 160,000 publications authored by our scientists over the past 100+ year history of the USGS.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.

Filter Total Items: 174960

Trends in richness and occupancy of Ugandan birds and relation to local tree cover Trends in richness and occupancy of Ugandan birds and relation to local tree cover

Changes in vegetation cover are occurring across sub-Saharan Africa and can have substantial effects on ecological communities, but limited data make understanding status and trends difficult for many taxa. We surveyed birds for several decades across Uganda using point counts. Using time-to-detection analysis in a trait-informed Bayesian multi-species occupancy framework, we model bird...
Authors
Ryan C. Burner, Evan M. Adams, Derek Pomeroy, Herbert Tushabe, Micheal Kibuule, Lars Jørgen Rostad, Zander S. Venter, Douglas Sheil

Fomites could determine severity of SARS-CoV-2 outbreaks in low-density white-tailed deer (Odocoileus virginianus) populations Fomites could determine severity of SARS-CoV-2 outbreaks in low-density white-tailed deer (Odocoileus virginianus) populations

The establishment of a reservoir species for zoonotic diseases is concerning for both animal and human health. Severe acute respiratory syndrome coronavirus (SARS-CoV)-2, the coronavirus responsible for the COVID-19 pandemic, has been detected in white-tailed deer (Odocoileus virginianus) in the United States. Since its initial detection, various studies have documented circulation and...
Authors
Elias Rosenblatt, Jonathan D. Cook, Graziella Vittoria DiRenzo, Evan H. Campbell Grant, Michael C. Runge, Brittany Mosher

Observing northern high-latitude river systems to understand changes in a warming Arctic Observing northern high-latitude river systems to understand changes in a warming Arctic

Purpose of Review Streams and rivers are undergoing rapid change as the Arctic warms and thaws. We review recent observations in Arctic stream systems to identify ubiquitous changes and the most useful tools for observing change and exploring the underlying processes.Recent Findings Recent literature indicates increasingly significant trends in river hydrology and chemistry due to...
Authors
Joshua C. Koch, J. A. O’Donnell

Two new species of Henneguya Thélohan, 1892 (Cnidaria: Bivalvulida: Myxobolidae) infecting gill of blue catfish, Ictalurus furcatus (Rafinesque) (Siluriformes: Ictaluridae) from the Tallapoosa River and Chesapeake Bay tributaries Two new species of Henneguya Thélohan, 1892 (Cnidaria: Bivalvulida: Myxobolidae) infecting gill of blue catfish, Ictalurus furcatus (Rafinesque) (Siluriformes: Ictaluridae) from the Tallapoosa River and Chesapeake Bay tributaries

We herein describe 2 new species of Henneguya Thélohan, 1892 (Bivalvulida: Myxobolidae), Henneguya auburnensis Ksepka and Bullard n. sp. and Henneguya chesapeakensis Ksepka, Walsh, and Bullard n. sp., infecting the inter-lamellar epithelium of cultured blue catfish (Ictalurus furcatus [Valenciennes, 1840] [Siluriformes: Ictaluridae]) from Saugahatchee Creek (Tallapoosa River; Auburn...
Authors
Steven Ksepka, Heather L. Walsh, Christine Densmore, Triet Truong, Stephen Bullard

Doe diligence: A regional analysis of antlerless deer harvest regulations in the Midwestern United States of America. Doe diligence: A regional analysis of antlerless deer harvest regulations in the Midwestern United States of America.

Wildlife management in the United States of America (US) is primarily delegated to the individual states wherein state wildlife agencies manage wildlife populations to achieve multiple and sometimes conflicting objectives. White-tailed deer (Odocoileus virginianus) are an important species in the Midwestern US whose populations are primarily managed through recreational hunting. Managers...
Authors
John P. Draper, Ellen E. Brandell, Jason Isabelle, Chris Jacques, Clint McCoy, Eric Michel, Daniel J. Storm, Caitlin Ott-Conn, Beth Wojcik, Wendy Christine Turner, Daniel P. Walsh

U.S. Geological Survey monitoring milestones—Rio Grande at Embudo, NM (08279500) U.S. Geological Survey monitoring milestones—Rio Grande at Embudo, NM (08279500)

Located at the site of the first U.S. Geological Survey (USGS) training camp for hydrographers, the Rio Grande at Embudo, NM (08279500), streamgage has been collecting water data since January 1889. The development and adaptation of equipment and techniques at this location became the foundation of USGS streamgaging methods.
Authors
Claire E. Bunch, Melissa L. Riskin

Assessing causes and consequences of winter surface water dynamics in California’s Central Valley using satellite remote sensing Assessing causes and consequences of winter surface water dynamics in California’s Central Valley using satellite remote sensing

California's Central Valley is increasingly vulnerable to winter floods. A comprehensive spatial baseline of flood extents is critical for inundation analyses that can enhance future flood predictions, but cloud cover has prevented the regular observation of surface water extents with optical satellite imagery. In this study, we leveraged the daily resolution of Moderate Resolution...
Authors
Christine M. Albano, Christopher E. Soulard, Blake A. Minor, Jessica J. Walker, Britt Windsor Smith, Eric K. Waller, Michael D. Bartles, Tom Corringham, Anthony T. O'Geen, Melissa M. Rohde, Anne Wein

Shotgun sequencing of airborne eDNA achieves rapid assessment of whole biomes, population genetics and genomic variation Shotgun sequencing of airborne eDNA achieves rapid assessment of whole biomes, population genetics and genomic variation

Biodiversity and its associated genetic diversity are being lost at an unprecedented rate. Simultaneously, the distributions of flora, fauna, fungi, microbes and pathogens are rapidly changing. Novel technology can help to capture and record genetic diversity before it is lost and to measure population shifts and pathogen distributions. Here we report the rapid application of shotgun...
Authors
Orestis Nousias, Mark Mccauley, Maximilian R. Stammnitz, Jessica A. Farrell, Samantha A. Koda, Victoria Summers, Catherine B. Eastman, Fiona G. Duffy, Isabelle J. Duffy, Jenny Whilde, David J. Duffy

New insights reveal a temporally distinct two-stock genetic structure for Suwannee River Gulf sturgeon New insights reveal a temporally distinct two-stock genetic structure for Suwannee River Gulf sturgeon

Understanding population genetic structure and patterns of gene flow is important for effective decision making and the preservation of genetic diversity, especially when managing protected species. Historically, Gulf sturgeon have been managed by river system, with early evidence supporting spatially distinct genetic structure across 7 natal populations. However, an increasing number of...
Authors
Melissa E. Price, Brian Kreiser, Michael T. Randall

Long-term surgery survival, body condition effects, and incision healing of Silver Carp and buffalo species comparing sedation methods across seasons Long-term surgery survival, body condition effects, and incision healing of Silver Carp and buffalo species comparing sedation methods across seasons

Objective Internal tagging for telemetry studies requires invasive surgery procedures, necessitating sufficient sedation to support animal welfare. Challenges with existing chemical sedatives have resulted in technological alternatives, including electrosedation, with these newer methods less extensively studied. Our primary objective was to understand long-term survival, body-condition...
Authors
Matthew Ross Acre, Sophia Marie Bonjour, Jacob N. Griffin, Robert Bratcher, Tyler Hessler, Dustin Broaddus, Andrew T. Mueller, Jacob Faulkner, Josey Lee Ridgway, Michael G. Iacchetta, Suzanne Colyer, Robin D. Calfee

Assessment of active sand volumes at Rockaway Beach and Fire Island in New York and Seven Mile Island in New Jersey Assessment of active sand volumes at Rockaway Beach and Fire Island in New York and Seven Mile Island in New Jersey

Between 2018 and 2023, the U.S. Geological Survey assessed shoreface sediment availability at three Atlantic Coast barrier island study sites in support of a National Fish and Wildlife Foundation project entitled, “Monitoring Hurricane Sandy Beach and Marsh Resilience in New York and New Jersey.” The three study sites are Seven Mile Island, New Jersey, Rockaway Beach peninsula, New York...
Authors
Noreen A. Buster, Jennifer L. Miselis, Emily A. Wei, Arnell S. Forde

Legacies of a large flood and biological control on riparian vegetation successional trajectories along a dryland braided river Legacies of a large flood and biological control on riparian vegetation successional trajectories along a dryland braided river

The interplay of disturbance and stability drives vegetation dynamics. Disturbance reduces vegetation biomass, and stability fosters its development. In riparian systems, natural disturbance is largely manifested through flood-driven fluvial processes, but other forms of disturbance, such as herbivory or fire, may influence vegetation dynamics. We studied the successional trajectories of...
Authors
Eduardo González-Sargas, Steven R. Lee, Laura G. Perry, Patrick B. Shafroth
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